RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 CDC42BPGQ6DT37 1551 aa28.43■■■□□ 2.14
PDCD2-202ENST00000392090 DDX17Q92841 729 aaKnown RBP28.42■■■□□ 2.14
PDCD2-202ENST00000392090 ORAI2Q96SN7 254 aa28.42■■■□□ 2.14
PDCD2-202ENST00000392090 NHSL1Q5SYE7 1610 aa28.41■■■□□ 2.14
PDCD2-202ENST00000392090 LRRC59Q96AG4 307 aaKnown RBP28.39■■■□□ 2.14
PDCD2-202ENST00000392090 PRAM1Q96QH2 718 aa28.39■■■□□ 2.14
PDCD2-202ENST00000392090 POGKQ9P215 609 aa28.39■■■□□ 2.14
PDCD2-202ENST00000392090 SPATA31A6Q5VVP1 1343 aa28.39■■■□□ 2.13
PDCD2-202ENST00000392090 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
PDCD2-202ENST00000392090 SAFB2Q14151 953 aaKnown RBP eCLIP28.38■■■□□ 2.13
PDCD2-202ENST00000392090 ESCO1Q5FWF5 840 aa28.38■■■□□ 2.13
PDCD2-202ENST00000392090 TRIM26Q12899 539 aaPredicted RBP28.37■■■□□ 2.13
PDCD2-202ENST00000392090 TRAK1Q9UPV9 953 aa28.37■■■□□ 2.13
PDCD2-202ENST00000392090 ADGRB1O14514 1584 aa28.37■■■□□ 2.13
PDCD2-202ENST00000392090 SHPRHQ149N8 1683 aa28.36■■■□□ 2.13
PDCD2-202ENST00000392090 DLC1Q96QB1 1528 aa28.34■■■□□ 2.13
PDCD2-202ENST00000392090 MEX3CQ5U5Q3 659 aaKnown RBP28.34■■■□□ 2.13
PDCD2-202ENST00000392090 SOCS7O14512 581 aa28.32■■■□□ 2.12
PDCD2-202ENST00000392090 RGS17Q9UGC6 210 aaPredicted RBP28.32■■■□□ 2.12
PDCD2-202ENST00000392090 NUTM2BA6NNL0 878 aaPredicted RBP28.31■■■□□ 2.12
PDCD2-202ENST00000392090 NUTM2EB1AL46 878 aaPredicted RBP28.31■■■□□ 2.12
PDCD2-202ENST00000392090 NUTM2AQ8IVF1 878 aaPredicted RBP28.31■■■□□ 2.12
PDCD2-202ENST00000392090 FMN2Q9NZ56 1722 aa28.29■■■□□ 2.12
PDCD2-202ENST00000392090 NPHP3Q7Z494 1330 aa28.29■■■□□ 2.12
PDCD2-202ENST00000392090 SIN3AQ96ST3 1273 aa28.29■■■□□ 2.12
PDCD2-202ENST00000392090 SOS2Q07890 1332 aaPredicted RBP28.28■■■□□ 2.12
PDCD2-202ENST00000392090 NEUROD1Q13562 356 aa28.28■■■□□ 2.12
PDCD2-202ENST00000392090 LRP6O75581 1613 aa28.28■■■□□ 2.12
PDCD2-202ENST00000392090 FOXO3O43524 673 aa28.27■■■□□ 2.12
PDCD2-202ENST00000392090 PNPLA6Q8IY17 1366 aa28.25■■■□□ 2.11
PDCD2-202ENST00000392090 MINK1Q8N4C8 1332 aaPredicted RBP28.24■■■□□ 2.11
PDCD2-202ENST00000392090 L3MBTL2Q969R5 705 aa28.24■■■□□ 2.11
PDCD2-202ENST00000392090 HIRIP3Q9BW71 556 aaPredicted RBP28.23■■■□□ 2.11
PDCD2-202ENST00000392090 KIAA1210Q9ULL0 1709 aa28.23■■■□□ 2.11
PDCD2-202ENST00000392090 XPCQ01831 940 aaPredicted RBP28.22■■■□□ 2.11
PDCD2-202ENST00000392090 POTEAQ6S8J7 498 aa28.2■■■□□ 2.1
PDCD2-202ENST00000392090 PHF8Q9UPP1 1060 aa28.19■■■□□ 2.1
PDCD2-202ENST00000392090 KIF1AQ12756 1690 aa28.19■■■□□ 2.1
PDCD2-202ENST00000392090 RGPD8O14715 1765 aaPredicted RBP28.19■■■□□ 2.1
PDCD2-202ENST00000392090 NBPF1Q3BBV0 1214 aa28.18■■■□□ 2.1
PDCD2-202ENST00000392090 ADGRB2O60241 1585 aa28.18■■■□□ 2.1
PDCD2-202ENST00000392090 PXDNQ92626 1479 aa28.17■■■□□ 2.1
PDCD2-202ENST00000392090 ARHGEF28Q8N1W1 1705 aaKnown RBP28.17■■■□□ 2.1
PDCD2-202ENST00000392090 EIF3AQ14152 1382 aaKnown RBP28.16■■■□□ 2.1
PDCD2-202ENST00000392090 ANKARQ7Z5J8 1434 aa28.16■■■□□ 2.1
PDCD2-202ENST00000392090 ZNF772Q68DY9 489 aaPredicted RBP28.15■■■□□ 2.1
PDCD2-202ENST00000392090 WASLO00401 505 aaPredicted RBP28.14■■■□□ 2.1
PDCD2-202ENST00000392090 ADAMTS2O95450 1211 aa28.13■■■□□ 2.09
PDCD2-202ENST00000392090 KRT28Q7Z3Y7 464 aa28.13■■■□□ 2.09
PDCD2-202ENST00000392090 C8orf37Q96NL8 207 aa28.12■■■□□ 2.09
PDCD2-202ENST00000392090 PMFBP1Q8TBY8 1022 aa28.11■■■□□ 2.09
PDCD2-202ENST00000392090 PSME1Q06323 249 aa28.1■■■□□ 2.09
PDCD2-202ENST00000392090 USP32Q8NFA0 1604 aa28.09■■■□□ 2.09
PDCD2-202ENST00000392090 AFF2P51816 1311 aa28.09■■■□□ 2.09
PDCD2-202ENST00000392090 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
PDCD2-202ENST00000392090 COL22A1Q8NFW1 1626 aaPredicted RBP28.07■■■□□ 2.08
PDCD2-202ENST00000392090 NGLY1Q96IV0 654 aa28.07■■■□□ 2.08
PDCD2-202ENST00000392090 SPATA31A3Q5VYP0 1347 aa28.07■■■□□ 2.08
PDCD2-202ENST00000392090 PRR36Q9H6K5 1346 aa28.06■■■□□ 2.08
PDCD2-202ENST00000392090 CDK19Q9BWU1 502 aa28.04■■■□□ 2.08
PDCD2-202ENST00000392090 TONSLQ96HA7 1378 aa28.03■■■□□ 2.08
PDCD2-202ENST00000392090 CENPJQ9HC77 1338 aaPredicted RBP28.03■■■□□ 2.08
PDCD2-202ENST00000392090 LMOD2Q6P5Q4 547 aa28.02■■■□□ 2.08
PDCD2-202ENST00000392090 NUDT16Q96DE0 195 aaKnown RBP28.02■■■□□ 2.08
PDCD2-202ENST00000392090 TRPM1Q7Z4N2 1603 aa28.02■■■□□ 2.08
PDCD2-202ENST00000392090 ROCK2O75116 1388 aaKnown RBP28.01■■■□□ 2.07
PDCD2-202ENST00000392090 GPRASP1Q5JY77 1395 aa28.01■■■□□ 2.07
PDCD2-202ENST00000392090 NGDNQ8NEJ9 315 aaKnown RBP28.01■■■□□ 2.07
PDCD2-202ENST00000392090 TNS3Q68CZ2 1445 aa28.01■■■□□ 2.07
PDCD2-202ENST00000392090 SBNO1A3KN83 1393 aa28■■■□□ 2.07
PDCD2-202ENST00000392090 RXRBP28702 533 aa27.99■■■□□ 2.07
PDCD2-202ENST00000392090 PLEKHG5O94827 1062 aa27.97■■■□□ 2.07
PDCD2-202ENST00000392090 HAP1P54257 671 aaPredicted RBP27.97■■■□□ 2.07
PDCD2-202ENST00000392090 ITSN1Q15811 1721 aa27.97■■■□□ 2.07
PDCD2-202ENST00000392090 ARHGEF10O15013 1369 aa27.97■■■□□ 2.07
PDCD2-202ENST00000392090 ATP7BP35670 1465 aa27.96■■■□□ 2.07
PDCD2-202ENST00000392090 NBPF8Q3BBV2 869 aa27.96■■■□□ 2.07
PDCD2-202ENST00000392090 QTRT2Q9H974 415 aaKnown RBP27.96■■■□□ 2.07
PDCD2-202ENST00000392090 SRPK2P78362 688 aaKnown RBP27.95■■■□□ 2.06
PDCD2-202ENST00000392090 USP21Q9UK80 565 aa27.95■■■□□ 2.06
PDCD2-202ENST00000392090 CCDC61Q9Y6R9 512 aa27.94■■■□□ 2.06
PDCD2-202ENST00000392090 QRICH2Q9H0J4 1663 aa27.94■■■□□ 2.06
PDCD2-202ENST00000392090 FNBP4Q8N3X1 1017 aaPredicted RBP27.92■■■□□ 2.06
PDCD2-202ENST00000392090 CABLES1Q8TDN4 633 aa27.92■■■□□ 2.06
PDCD2-202ENST00000392090 PAK3O75914 559 aaPredicted RBP27.91■■■□□ 2.06
PDCD2-202ENST00000392090 MARF1Q9Y4F3 1742 aaKnown RBP27.91■■■□□ 2.06
PDCD2-202ENST00000392090 RBM6P78332 1123 aaKnown RBP27.89■■■□□ 2.06
PDCD2-202ENST00000392090 CABP2Q9NPB3 220 aa27.89■■■□□ 2.06
PDCD2-202ENST00000392090 TRPM3Q9HCF6 1732 aaPredicted RBP27.89■■■□□ 2.05
PDCD2-202ENST00000392090 PCGF6Q9BYE7 350 aa27.88■■■□□ 2.05
PDCD2-202ENST00000392090 TRPC5Q9UL62 973 aaPredicted RBP27.88■■■□□ 2.05
PDCD2-202ENST00000392090 CARD11Q9BXL7 1154 aa27.87■■■□□ 2.05
PDCD2-202ENST00000392090 TOPAZ1Q8N9V7 1692 aa27.86■■■□□ 2.05
PDCD2-202ENST00000392090 ACEP12821 1306 aa27.86■■■□□ 2.05
PDCD2-202ENST00000392090 EVC2Q86UK5 1308 aa27.86■■■□□ 2.05
PDCD2-202ENST00000392090 PLEKHG3A1L390 1219 aa27.85■■■□□ 2.05
PDCD2-202ENST00000392090 POLR3AO14802 1390 aaPredicted RBP27.84■■■□□ 2.05
PDCD2-202ENST00000392090 CDK12Q9NYV4 1490 aaPredicted RBP27.83■■■□□ 2.05
PDCD2-202ENST00000392090 ALS2Q96Q42 1657 aa27.83■■■□□ 2.05
PDCD2-202ENST00000392090 PPIP5K1Q6PFW1 1433 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms