RNA–Protein interactions for RNA: ENST00000389675.6

MRPL28-202, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL28, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-202ENST00000389675 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.29■■□□□ 1.32
MRPL28-202ENST00000389675 FAM135BQ49AJ0 1406 aa23.28■■□□□ 1.32
MRPL28-202ENST00000389675 NALCNQ8IZF0 1738 aa23.28■■□□□ 1.32
MRPL28-202ENST00000389675 NBPF1Q3BBV0 1214 aa23.27■■□□□ 1.32
MRPL28-202ENST00000389675 SIRT1Q96EB6 747 aa23.27■■□□□ 1.32
MRPL28-202ENST00000389675 PRAM1Q96QH2 718 aa23.27■■□□□ 1.32
MRPL28-202ENST00000389675 DCCP43146 1447 aa23.26■■□□□ 1.31
MRPL28-202ENST00000389675 DLC1Q96QB1 1528 aa23.26■■□□□ 1.31
MRPL28-202ENST00000389675 PLEKHH1Q9ULM0 1364 aa23.26■■□□□ 1.31
MRPL28-202ENST00000389675 SAFB2Q14151 953 aaKnown RBP eCLIP23.25■■□□□ 1.31
MRPL28-202ENST00000389675 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
MRPL28-202ENST00000389675 TRPM1Q7Z4N2 1603 aa23.24■■□□□ 1.31
MRPL28-202ENST00000389675 NBPF8Q3BBV2 869 aa23.24■■□□□ 1.31
MRPL28-202ENST00000389675 ROCK2O75116 1388 aaKnown RBP23.24■■□□□ 1.31
MRPL28-202ENST00000389675 TIMELESSQ9UNS1 1208 aa23.23■■□□□ 1.31
MRPL28-202ENST00000389675 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
MRPL28-202ENST00000389675 ARHGEF28Q8N1W1 1705 aaKnown RBP23.18■■□□□ 1.3
MRPL28-202ENST00000389675 CDC42BPGQ6DT37 1551 aa23.18■■□□□ 1.3
MRPL28-202ENST00000389675 MST1RQ04912 1400 aa23.16■■□□□ 1.3
MRPL28-202ENST00000389675 MINK1Q8N4C8 1332 aaPredicted RBP23.16■■□□□ 1.3
MRPL28-202ENST00000389675 POTEAQ6S8J7 498 aa23.16■■□□□ 1.3
MRPL28-202ENST00000389675 RALGAPBQ86X10 1494 aa23.16■■□□□ 1.3
MRPL28-202ENST00000389675 CARD11Q9BXL7 1154 aa23.15■■□□□ 1.3
MRPL28-202ENST00000389675 HIRIP3Q9BW71 556 aaPredicted RBP23.13■■□□□ 1.29
MRPL28-202ENST00000389675 CENPJQ9HC77 1338 aaPredicted RBP23.12■■□□□ 1.29
MRPL28-202ENST00000389675 NUTM2FA1L443 756 aa23.12■■□□□ 1.29
MRPL28-202ENST00000389675 EIF3AQ14152 1382 aaKnown RBP23.12■■□□□ 1.29
MRPL28-202ENST00000389675 GPRASP1Q5JY77 1395 aa23.12■■□□□ 1.29
MRPL28-202ENST00000389675 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
MRPL28-202ENST00000389675 BRINP3Q76B58 766 aa23.1■■□□□ 1.29
MRPL28-202ENST00000389675 ADGRB2O60241 1585 aa23.09■■□□□ 1.29
MRPL28-202ENST00000389675 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.29
MRPL28-202ENST00000389675 COL16A1Q07092 1604 aaPredicted RBP23.08■■□□□ 1.28
MRPL28-202ENST00000389675 ESCO1Q5FWF5 840 aa23.07■■□□□ 1.28
MRPL28-202ENST00000389675 ORAI2Q96SN7 254 aa23.06■■□□□ 1.28
MRPL28-202ENST00000389675 WASLO00401 505 aaPredicted RBP23.05■■□□□ 1.28
MRPL28-202ENST00000389675 QRICH2Q9H0J4 1663 aa23.05■■□□□ 1.28
MRPL28-202ENST00000389675 JCADQ9P266 1359 aa23.01■■□□□ 1.27
MRPL28-202ENST00000389675 ANKARQ7Z5J8 1434 aa23.01■■□□□ 1.27
MRPL28-202ENST00000389675 AHDC1Q5TGY3 1603 aaPredicted RBP23■■□□□ 1.27
MRPL28-202ENST00000389675 TULP4Q9NRJ4 1543 aa23■■□□□ 1.27
MRPL28-202ENST00000389675 CDK19Q9BWU1 502 aa23■■□□□ 1.27
MRPL28-202ENST00000389675 SHPRHQ149N8 1683 aa23■■□□□ 1.27
MRPL28-202ENST00000389675 SRPK2P78362 688 aaKnown RBP22.98■■□□□ 1.27
MRPL28-202ENST00000389675 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
MRPL28-202ENST00000389675 PHF8Q9UPP1 1060 aa22.97■■□□□ 1.27
MRPL28-202ENST00000389675 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
MRPL28-202ENST00000389675 RGPD8O14715 1765 aaPredicted RBP22.96■■□□□ 1.27
MRPL28-202ENST00000389675 NPHP3Q7Z494 1330 aa22.96■■□□□ 1.27
MRPL28-202ENST00000389675 EVC2Q86UK5 1308 aa22.96■■□□□ 1.27
MRPL28-202ENST00000389675 LRP6O75581 1613 aa22.96■■□□□ 1.27
MRPL28-202ENST00000389675 KIF1AQ12756 1690 aa22.96■■□□□ 1.27
MRPL28-202ENST00000389675 FOXO3O43524 673 aa22.95■■□□□ 1.26
MRPL28-202ENST00000389675 USP32Q8NFA0 1604 aa22.95■■□□□ 1.26
MRPL28-202ENST00000389675 NUDT16Q96DE0 195 aaKnown RBP22.95■■□□□ 1.26
MRPL28-202ENST00000389675 USP47Q96K76 1375 aa22.95■■□□□ 1.26
MRPL28-202ENST00000389675 PRR36Q9H6K5 1346 aa22.94■■□□□ 1.26
MRPL28-202ENST00000389675 PMFBP1Q8TBY8 1022 aa22.93■■□□□ 1.26
MRPL28-202ENST00000389675 CABP2Q9NPB3 220 aa22.93■■□□□ 1.26
MRPL28-202ENST00000389675 ATP7BP35670 1465 aa22.92■■□□□ 1.26
MRPL28-202ENST00000389675 ST20-MTHFSA0A0A6YYL1 179 aa22.92■■□□□ 1.26
MRPL28-202ENST00000389675 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
MRPL28-202ENST00000389675 SBNO2Q9Y2G9 1366 aa22.91■■□□□ 1.26
MRPL28-202ENST00000389675 XPCQ01831 940 aaPredicted RBP22.91■■□□□ 1.26
MRPL28-202ENST00000389675 LRRC59Q96AG4 307 aaKnown RBP22.91■■□□□ 1.26
MRPL28-202ENST00000389675 NGDNQ8NEJ9 315 aaKnown RBP22.89■■□□□ 1.25
MRPL28-202ENST00000389675 CCDC61Q9Y6R9 512 aa22.89■■□□□ 1.25
MRPL28-202ENST00000389675 SOS2Q07890 1332 aaPredicted RBP22.88■■□□□ 1.25
MRPL28-202ENST00000389675 SPATA31A6Q5VVP1 1343 aa22.88■■□□□ 1.25
MRPL28-202ENST00000389675 PSME1Q06323 249 aa22.88■■□□□ 1.25
MRPL28-202ENST00000389675 SLC24A1O60721 1099 aa22.87■■□□□ 1.25
MRPL28-202ENST00000389675 KRT28Q7Z3Y7 464 aa22.87■■□□□ 1.25
MRPL28-202ENST00000389675 PXDNQ92626 1479 aa22.85■■□□□ 1.25
MRPL28-202ENST00000389675 TOPAZ1Q8N9V7 1692 aa22.84■■□□□ 1.25
MRPL28-202ENST00000389675 PPIP5K1Q6PFW1 1433 aa22.84■■□□□ 1.25
MRPL28-202ENST00000389675 EIF4G2P78344 907 aaKnown RBP eCLIP22.83■■□□□ 1.25
MRPL28-202ENST00000389675 ZNF772Q68DY9 489 aaPredicted RBP22.83■■□□□ 1.25
MRPL28-202ENST00000389675 TESK2Q96S53 571 aa22.83■■□□□ 1.25
MRPL28-202ENST00000389675 ATAD2Q6PL18 1390 aa22.83■■□□□ 1.25
MRPL28-202ENST00000389675 MEX3CQ5U5Q3 659 aaKnown RBP22.82■■□□□ 1.24
MRPL28-202ENST00000389675 UPF1Q92900 1129 aaKnown RBP eCLIP22.82■■□□□ 1.24
MRPL28-202ENST00000389675 PLEKHG3A1L390 1219 aa22.81■■□□□ 1.24
MRPL28-202ENST00000389675 TMF1P82094 1093 aa22.81■■□□□ 1.24
MRPL28-202ENST00000389675 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
MRPL28-202ENST00000389675 ACEP12821 1306 aa22.81■■□□□ 1.24
MRPL28-202ENST00000389675 PNPLA6Q8IY17 1366 aa22.8■■□□□ 1.24
MRPL28-202ENST00000389675 LMOD2Q6P5Q4 547 aa22.8■■□□□ 1.24
MRPL28-202ENST00000389675 NUTM2BA6NNL0 878 aaPredicted RBP22.78■■□□□ 1.24
MRPL28-202ENST00000389675 NUTM2EB1AL46 878 aaPredicted RBP22.78■■□□□ 1.24
MRPL28-202ENST00000389675 PAK3O75914 559 aaPredicted RBP22.78■■□□□ 1.24
MRPL28-202ENST00000389675 NUTM2AQ8IVF1 878 aaPredicted RBP22.78■■□□□ 1.24
MRPL28-202ENST00000389675 CDK12Q9NYV4 1490 aaPredicted RBP22.78■■□□□ 1.24
MRPL28-202ENST00000389675 SPATA31A3Q5VYP0 1347 aa22.78■■□□□ 1.24
MRPL28-202ENST00000389675 SBNO1A3KN83 1393 aa22.77■■□□□ 1.24
MRPL28-202ENST00000389675 POLR3AO14802 1390 aaPredicted RBP22.77■■□□□ 1.24
MRPL28-202ENST00000389675 TNS3Q68CZ2 1445 aa22.77■■□□□ 1.24
MRPL28-202ENST00000389675 HSPA5P11021 654 aaKnown RBP22.77■■□□□ 1.24
MRPL28-202ENST00000389675 TMC1Q8TDI8 760 aa22.77■■□□□ 1.24
MRPL28-202ENST00000389675 CDCA8Q53HL2 280 aa22.75■■□□□ 1.23
MRPL28-202ENST00000389675 PUS7Q96PZ0 661 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 274.1 ms