RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 KCNA1Q09470 495 aa8.15□□□□□ -1.1
ERCC4-202ENST00000389138 TYW1BQ6NUM6 668 aa8.15□□□□□ -1.1
ERCC4-202ENST00000389138 ZNF526Q8TF50 670 aaPredicted RBP8.15□□□□□ -1.1
ERCC4-202ENST00000389138 MYT1LQ9UL68 1186 aa8.15□□□□□ -1.1
ERCC4-202ENST00000389138 ERICH3Q5RHP9 1530 aa8.15□□□□□ -1.1
ERCC4-202ENST00000389138 MLLT3P42568 568 aaPredicted RBP8.15□□□□□ -1.11
ERCC4-202ENST00000389138 PPP4R3BQ5MIZ7 849 aa8.15□□□□□ -1.11
ERCC4-202ENST00000389138 DDX12PQ92771 950 aa8.15□□□□□ -1.11
ERCC4-202ENST00000389138 MAP3K4Q9Y6R4 1608 aa8.14□□□□□ -1.11
ERCC4-202ENST00000389138 EMP3P54852 163 aa8.14□□□□□ -1.11
ERCC4-202ENST00000389138 PARP9Q8IXQ6 854 aa8.14□□□□□ -1.11
ERCC4-202ENST00000389138 ERBB3P21860 1342 aa8.13□□□□□ -1.11
ERCC4-202ENST00000389138 CUL7Q14999 1698 aa8.13□□□□□ -1.11
ERCC4-202ENST00000389138 PPP1R15AO75807 674 aaPredicted RBP8.13□□□□□ -1.11
ERCC4-202ENST00000389138 ZNF454Q8N9F8 522 aa8.13□□□□□ -1.11
ERCC4-202ENST00000389138 PCDHGA10Q9Y5H3 936 aa8.13□□□□□ -1.11
ERCC4-202ENST00000389138 SND1Q7KZF4 910 aaKnown RBP eCLIP8.12□□□□□ -1.11
ERCC4-202ENST00000389138 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
ERCC4-202ENST00000389138 COL17A1Q9UMD9 1497 aaPredicted RBP8.12□□□□□ -1.11
ERCC4-202ENST00000389138 OSBPP22059 807 aa8.12□□□□□ -1.11
ERCC4-202ENST00000389138 CANXP27824 592 aaKnown RBP8.12□□□□□ -1.11
ERCC4-202ENST00000389138 IVNS1ABPQ9Y6Y0 642 aa8.12□□□□□ -1.11
ERCC4-202ENST00000389138 BIVM-ERCC5R4GMW8 1640 aa8.12□□□□□ -1.11
ERCC4-202ENST00000389138 RBM47A0AV96 593 aaKnown RBP8.11□□□□□ -1.11
ERCC4-202ENST00000389138 PATL2C9JE40 543 aaKnown RBP8.11□□□□□ -1.11
ERCC4-202ENST00000389138 SOCS7O14512 581 aa8.11□□□□□ -1.11
ERCC4-202ENST00000389138 SIRT1Q96EB6 747 aa8.11□□□□□ -1.11
ERCC4-202ENST00000389138 EN1Q05925 392 aaPredicted RBP8.1□□□□□ -1.11
ERCC4-202ENST00000389138 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
ERCC4-202ENST00000389138 KIF21BO75037 1637 aa8.1□□□□□ -1.11
ERCC4-202ENST00000389138 ANKRD13AQ8IZ07 590 aa8.09□□□□□ -1.11
ERCC4-202ENST00000389138 MARVELD3Q96A59 401 aa8.09□□□□□ -1.11
ERCC4-202ENST00000389138 MRRFQ96E11 262 aaKnown RBP8.09□□□□□ -1.11
ERCC4-202ENST00000389138 WRNQ14191 1432 aaPredicted RBP eCLIP8.08□□□□□ -1.12
ERCC4-202ENST00000389138 VARS2Q5ST30 1063 aaKnown RBP8.08□□□□□ -1.12
ERCC4-202ENST00000389138 COG6Q9Y2V7 657 aa8.08□□□□□ -1.12
ERCC4-202ENST00000389138 ACIN1Q9UKV3 1341 aaKnown RBP8.08□□□□□ -1.12
ERCC4-202ENST00000389138 ABCC2Q92887 1545 aa8.08□□□□□ -1.12
ERCC4-202ENST00000389138 ILDR2Q71H61 639 aa8.08□□□□□ -1.12
ERCC4-202ENST00000389138 TXNDC2Q86VQ3 553 aa8.08□□□□□ -1.12
ERCC4-202ENST00000389138 PLB1Q6P1J6 1458 aa8.08□□□□□ -1.12
ERCC4-202ENST00000389138 TEX14Q8IWB6 1497 aa8.08□□□□□ -1.12
ERCC4-202ENST00000389138 ASXL2Q76L83 1435 aa8.07□□□□□ -1.12
ERCC4-202ENST00000389138 ZC3H4Q9UPT8 1303 aaKnown RBP8.07□□□□□ -1.12
ERCC4-202ENST00000389138 LOC102724159A0A0B4J2E5 919 aa8.07□□□□□ -1.12
ERCC4-202ENST00000389138 FAM205CA6NFA0 338 aa8.07□□□□□ -1.12
ERCC4-202ENST00000389138 GPR37O15354 613 aa8.07□□□□□ -1.12
ERCC4-202ENST00000389138 PWP2Q15269 919 aaKnown RBP8.07□□□□□ -1.12
ERCC4-202ENST00000389138 CCDC136Q96JN2 1154 aa8.07□□□□□ -1.12
ERCC4-202ENST00000389138 BCL2L12Q9HB09 334 aa8.07□□□□□ -1.12
ERCC4-202ENST00000389138 MAP3K7O43318 606 aa8.06□□□□□ -1.12
ERCC4-202ENST00000389138 KCNH8Q96L42 1107 aa8.06□□□□□ -1.12
ERCC4-202ENST00000389138 DRC1Q96MC2 740 aa8.06□□□□□ -1.12
ERCC4-202ENST00000389138 PBX2P40425 430 aa8.06□□□□□ -1.12
ERCC4-202ENST00000389138 SKIV2LQ15477 1246 aaKnown RBP8.06□□□□□ -1.12
ERCC4-202ENST00000389138 ZNF687Q8N1G0 1237 aa8.06□□□□□ -1.12
ERCC4-202ENST00000389138 HS3ST6Q96QI5 342 aa8.06□□□□□ -1.12
ERCC4-202ENST00000389138 ZNF330Q9Y3S2 320 aaPredicted RBP8.06□□□□□ -1.12
ERCC4-202ENST00000389138 A0A0U1RQG5 324 aaPredicted RBP8.05□□□□□ -1.12
ERCC4-202ENST00000389138 PTPREP23469 700 aa8.05□□□□□ -1.12
ERCC4-202ENST00000389138 FGD1P98174 961 aa8.05□□□□□ -1.12
ERCC4-202ENST00000389138 CERKQ8TCT0 537 aa8.05□□□□□ -1.12
ERCC4-202ENST00000389138 RBM33Q96EV2 1170 aaKnown RBP8.05□□□□□ -1.12
ERCC4-202ENST00000389138 ADAM33Q9BZ11 813 aa8.05□□□□□ -1.12
ERCC4-202ENST00000389138 SPATA31D1Q6ZQQ2 1576 aa8.05□□□□□ -1.12
ERCC4-202ENST00000389138 AMHR2Q16671 573 aa8.05□□□□□ -1.12
ERCC4-202ENST00000389138 C6orf132Q5T0Z8 1188 aa8.05□□□□□ -1.12
ERCC4-202ENST00000389138 ADAMTSL3P82987 1691 aa8.04□□□□□ -1.12
ERCC4-202ENST00000389138 EPRSP07814 1512 aaKnown RBP8.04□□□□□ -1.12
ERCC4-202ENST00000389138 KIAA0586Q9BVV6 1533 aa8.04□□□□□ -1.12
ERCC4-202ENST00000389138 NUTM2FA1L443 756 aa8.04□□□□□ -1.12
ERCC4-202ENST00000389138 NOL8Q76FK4 1167 aaKnown RBP8.04□□□□□ -1.12
ERCC4-202ENST00000389138 PCMTD1Q96MG8 357 aaPredicted RBP8.04□□□□□ -1.12
ERCC4-202ENST00000389138 RIPOR2Q9Y4F9 1068 aa8.04□□□□□ -1.12
ERCC4-202ENST00000389138 PCF11O94913 1555 aaKnown RBP8.04□□□□□ -1.12
ERCC4-202ENST00000389138 PRIM1P49642 420 aaKnown RBP8.03□□□□□ -1.12
ERCC4-202ENST00000389138 ZNF662Q6ZS27 426 aa8.03□□□□□ -1.12
ERCC4-202ENST00000389138 DISP3Q9P2K9 1392 aa8.03□□□□□ -1.12
ERCC4-202ENST00000389138 ZCCHC11Q5TAX3 1644 aaKnown RBP8.03□□□□□ -1.12
ERCC4-202ENST00000389138 MARCH6O60337 910 aa8.03□□□□□ -1.12
ERCC4-202ENST00000389138 FCHSD2O94868 740 aa8.03□□□□□ -1.12
ERCC4-202ENST00000389138 CCDC102AQ96A19 550 aa8.03□□□□□ -1.12
ERCC4-202ENST00000389138 ANKRD62A6NC57 917 aa8.02□□□□□ -1.13
ERCC4-202ENST00000389138 ARHGAP33O14559 1287 aa8.02□□□□□ -1.13
ERCC4-202ENST00000389138 GIMAP6Q6P9H5 292 aa8.02□□□□□ -1.13
ERCC4-202ENST00000389138 SREK1Q8WXA9 508 aaKnown RBP8.02□□□□□ -1.13
ERCC4-202ENST00000389138 CFAP43Q8NDM7 1665 aa8.02□□□□□ -1.13
ERCC4-202ENST00000389138 UHRF1BP1LA0JNW5 1464 aa8.01□□□□□ -1.13
ERCC4-202ENST00000389138 PPP1R3GB7ZBB8 358 aa8.01□□□□□ -1.13
ERCC4-202ENST00000389138 MS4A1P11836 297 aa8.01□□□□□ -1.13
ERCC4-202ENST00000389138 PTPRMP28827 1452 aa8.01□□□□□ -1.13
ERCC4-202ENST00000389138 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8□□□□□ -1.13
ERCC4-202ENST00000389138 HIRIP3Q9BW71 556 aaPredicted RBP8□□□□□ -1.13
ERCC4-202ENST00000389138 PTPRGP23470 1445 aa8□□□□□ -1.13
ERCC4-202ENST00000389138 NCLP19338 710 aaKnown RBP8□□□□□ -1.13
ERCC4-202ENST00000389138 TSR1Q2NL82 804 aaKnown RBP8□□□□□ -1.13
ERCC4-202ENST00000389138 PTGDRQ13258 359 aa7.99□□□□□ -1.13
ERCC4-202ENST00000389138 HIC1Q14526 733 aa7.99□□□□□ -1.13
ERCC4-202ENST00000389138 USTQ9Y2C2 406 aa7.99□□□□□ -1.13
ERCC4-202ENST00000389138 BCORL1Q5H9F3 1711 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms