RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 WDR7Q9Y4E6 1490 aa23.64■■□□□ 1.38
CSPG5-202ENST00000383738 RUNDC1Q96C34 613 aa23.64■■□□□ 1.37
CSPG5-202ENST00000383738 MSNP26038 577 aaKnown RBP23.64■■□□□ 1.37
CSPG5-202ENST00000383738 SYTL4Q96C24 671 aaPredicted RBP23.63■■□□□ 1.37
CSPG5-202ENST00000383738 E9PSI1 815 aa23.63■■□□□ 1.37
CSPG5-202ENST00000383738 CALD1Q05682 793 aaKnown RBP23.63■■□□□ 1.37
CSPG5-202ENST00000383738 TEFQ10587 303 aa23.63■■□□□ 1.37
CSPG5-202ENST00000383738 PANK1Q8TE04 598 aa23.63■■□□□ 1.37
CSPG5-202ENST00000383738 CENPQQ7L2Z9 268 aaPredicted RBP23.62■■□□□ 1.37
CSPG5-202ENST00000383738 NUDT16Q96DE0 195 aaKnown RBP23.62■■□□□ 1.37
CSPG5-202ENST00000383738 PKNOX2Q96KN3 472 aa23.61■■□□□ 1.37
CSPG5-202ENST00000383738 CHMP3Q9Y3E7 222 aa23.61■■□□□ 1.37
CSPG5-202ENST00000383738 SULT6B1Q6IMI4 303 aa23.6■■□□□ 1.37
CSPG5-202ENST00000383738 THUMPD2Q9BTF0 503 aaKnown RBP23.6■■□□□ 1.37
CSPG5-202ENST00000383738 AMOTL2Q9Y2J4 779 aa23.6■■□□□ 1.37
CSPG5-202ENST00000383738 RTEL1-TNFRSF6BF6WH68 1400 aa23.59■■□□□ 1.37
CSPG5-202ENST00000383738 FOXO3O43524 673 aa23.59■■□□□ 1.37
CSPG5-202ENST00000383738 NME9Q86XW9 330 aa23.59■■□□□ 1.37
CSPG5-202ENST00000383738 CFAP65Q6ZU64 1925 aaKnown RBP23.59■■□□□ 1.37
CSPG5-202ENST00000383738 ZC3H6P61129 1189 aaKnown RBP23.59■■□□□ 1.37
CSPG5-202ENST00000383738 KDM5BQ9UGL1 1544 aa23.58■■□□□ 1.37
CSPG5-202ENST00000383738 DISP3Q9P2K9 1392 aa23.58■■□□□ 1.36
CSPG5-202ENST00000383738 CCDC61Q9Y6R9 512 aa23.58■■□□□ 1.36
CSPG5-202ENST00000383738 C20orf194Q5TEA3 1177 aa23.56■■□□□ 1.36
CSPG5-202ENST00000383738 BCAR3O75815 825 aa23.56■■□□□ 1.36
CSPG5-202ENST00000383738 BRD4O60885 1362 aaPredicted RBP23.55■■□□□ 1.36
CSPG5-202ENST00000383738 C1orf141Q5JVX7 400 aa23.55■■□□□ 1.36
CSPG5-202ENST00000383738 RPGRIP1LQ68CZ1 1315 aa23.54■■□□□ 1.36
CSPG5-202ENST00000383738 NCKAP5LQ9HCH0 1330 aa23.54■■□□□ 1.36
CSPG5-202ENST00000383738 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
CSPG5-202ENST00000383738 RWDD1Q9H446 243 aaPredicted RBP23.54■■□□□ 1.36
CSPG5-202ENST00000383738 NSD3Q9BZ95 1437 aa23.54■■□□□ 1.36
CSPG5-202ENST00000383738 STRN4Q9NRL3 753 aa23.54■■□□□ 1.36
CSPG5-202ENST00000383738 ABCC2Q92887 1545 aa23.54■■□□□ 1.36
CSPG5-202ENST00000383738 FOXD4L5Q5VV16 416 aaPredicted RBP23.53■■□□□ 1.36
CSPG5-202ENST00000383738 FOXD4L4Q8WXT5 416 aaPredicted RBP23.53■■□□□ 1.36
CSPG5-202ENST00000383738 EMILIN1Q9Y6C2 1016 aa23.52■■□□□ 1.36
CSPG5-202ENST00000383738 A2MP01023 1474 aa23.52■■□□□ 1.35
CSPG5-202ENST00000383738 EXOSC9Q06265 439 aaKnown RBP23.52■■□□□ 1.35
CSPG5-202ENST00000383738 ZKSCAN2Q63HK3 967 aa23.51■■□□□ 1.35
CSPG5-202ENST00000383738 C14orf93Q9H972 538 aaKnown RBP23.51■■□□□ 1.35
CSPG5-202ENST00000383738 KCNJ4P48050 445 aa23.51■■□□□ 1.35
CSPG5-202ENST00000383738 HSPA2P54652 639 aa23.5■■□□□ 1.35
CSPG5-202ENST00000383738 DCTN1Q14203 1278 aa23.5■■□□□ 1.35
CSPG5-202ENST00000383738 TSPYL4Q9UJ04 414 aa23.5■■□□□ 1.35
CSPG5-202ENST00000383738 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
CSPG5-202ENST00000383738 FAM13BQ9NYF5 915 aa23.49■■□□□ 1.35
CSPG5-202ENST00000383738 MIS18AQ9NYP9 233 aa23.48■■□□□ 1.35
CSPG5-202ENST00000383738 CHMP4BQ9H444 224 aaKnown RBP23.48■■□□□ 1.35
CSPG5-202ENST00000383738 ERCC6L2Q5T890 1561 aa23.47■■□□□ 1.35
CSPG5-202ENST00000383738 AIMP1Q12904 312 aaKnown RBP23.47■■□□□ 1.35
CSPG5-202ENST00000383738 NAP1L2Q9ULW6 460 aaPredicted RBP23.47■■□□□ 1.35
CSPG5-202ENST00000383738 USHBP1Q8N6Y0 703 aa23.46■■□□□ 1.35
CSPG5-202ENST00000383738 RAPGEF4Q8WZA2 1011 aa23.46■■□□□ 1.35
CSPG5-202ENST00000383738 POGZQ7Z3K3 1410 aa23.46■■□□□ 1.35
CSPG5-202ENST00000383738 FKBP5Q13451 457 aaPredicted RBP23.46■■□□□ 1.35
CSPG5-202ENST00000383738 ZRANB1Q9UGI0 708 aa23.46■■□□□ 1.35
CSPG5-202ENST00000383738 PIP4K2BP78356 416 aa23.45■■□□□ 1.35
CSPG5-202ENST00000383738 ANKRD45Q5TZF3 282 aa23.45■■□□□ 1.34
CSPG5-202ENST00000383738 NUTM2BA6NNL0 878 aaPredicted RBP23.45■■□□□ 1.34
CSPG5-202ENST00000383738 NUTM2EB1AL46 878 aaPredicted RBP23.45■■□□□ 1.34
CSPG5-202ENST00000383738 FOXD4L6Q3SYB3 417 aaPredicted RBP23.45■■□□□ 1.34
CSPG5-202ENST00000383738 FOXD4L3Q6VB84 417 aaPredicted RBP23.45■■□□□ 1.34
CSPG5-202ENST00000383738 NUTM2AQ8IVF1 878 aaPredicted RBP23.45■■□□□ 1.34
CSPG5-202ENST00000383738 SAMD9Q5K651 1589 aa23.44■■□□□ 1.34
CSPG5-202ENST00000383738 SMG6Q86US8 1419 aaKnown RBP23.44■■□□□ 1.34
CSPG5-202ENST00000383738 CASC1Q6TDU7 716 aa23.44■■□□□ 1.34
CSPG5-202ENST00000383738 TCOF1Q13428 1488 aaKnown RBP23.43■■□□□ 1.34
CSPG5-202ENST00000383738 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
CSPG5-202ENST00000383738 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
CSPG5-202ENST00000383738 CFAP43Q8NDM7 1665 aa23.42■■□□□ 1.34
CSPG5-202ENST00000383738 DZIP1LQ8IYY4 767 aaKnown RBP23.42■■□□□ 1.34
CSPG5-202ENST00000383738 TRIM6-TRIM34B2RNG4 842 aa23.41■■□□□ 1.34
CSPG5-202ENST00000383738 ZNF518AQ6AHZ1 1483 aa23.41■■□□□ 1.34
CSPG5-202ENST00000383738 A0A0U1RQG5 324 aaPredicted RBP23.41■■□□□ 1.34
CSPG5-202ENST00000383738 WASLO00401 505 aaPredicted RBP23.41■■□□□ 1.34
CSPG5-202ENST00000383738 GBP4Q96PP9 640 aa23.41■■□□□ 1.34
CSPG5-202ENST00000383738 FAM43AQ8N2R8 423 aa23.41■■□□□ 1.34
CSPG5-202ENST00000383738 RBM10P98175 930 aaKnown RBP23.4■■□□□ 1.34
CSPG5-202ENST00000383738 TESK2Q96S53 571 aa23.4■■□□□ 1.34
CSPG5-202ENST00000383738 C1orf115Q9H7X2 142 aa23.4■■□□□ 1.34
CSPG5-202ENST00000383738 PZPP20742 1482 aa23.4■■□□□ 1.34
CSPG5-202ENST00000383738 NOL8Q76FK4 1167 aaKnown RBP23.4■■□□□ 1.34
CSPG5-202ENST00000383738 ZNF692Q9BU19 519 aaPredicted RBP23.39■■□□□ 1.33
CSPG5-202ENST00000383738 FGD1P98174 961 aa23.38■■□□□ 1.33
CSPG5-202ENST00000383738 TTC5Q8N0Z6 440 aa23.37■■□□□ 1.33
CSPG5-202ENST00000383738 DDX54Q8TDD1 881 aaKnown RBP23.37■■□□□ 1.33
CSPG5-202ENST00000383738 UBE2Q2Q8WVN8 375 aa23.37■■□□□ 1.33
CSPG5-202ENST00000383738 DDX49Q9Y6V7 483 aaKnown RBP23.37■■□□□ 1.33
CSPG5-202ENST00000383738 MCM10Q7L590 875 aa23.36■■□□□ 1.33
CSPG5-202ENST00000383738 GNAI1P63096 354 aa23.36■■□□□ 1.33
CSPG5-202ENST00000383738 LNPKQ9C0E8 428 aa23.36■■□□□ 1.33
CSPG5-202ENST00000383738 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
CSPG5-202ENST00000383738 ATAD2Q6PL18 1390 aa23.34■■□□□ 1.33
CSPG5-202ENST00000383738 TRAK2O60296 914 aa23.33■■□□□ 1.33
CSPG5-202ENST00000383738 TNRQ92752 1358 aa23.33■■□□□ 1.33
CSPG5-202ENST00000383738 PRDM11Q9NQV5 511 aa23.33■■□□□ 1.32
CSPG5-202ENST00000383738 WWC1Q8IX03 1113 aa23.32■■□□□ 1.32
CSPG5-202ENST00000383738 TAF7LQ5H9L4 462 aa23.32■■□□□ 1.32
CSPG5-202ENST00000383738 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms