RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 IPO8O15397 1037 aaKnown RBP13.32□□□□□ -0.28
USP6NL-202ENST00000379237 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
USP6NL-202ENST00000379237 CASKIN1Q8WXD9 1431 aa13.32□□□□□ -0.28
USP6NL-202ENST00000379237 LRSAM1Q6UWE0 723 aa13.32□□□□□ -0.28
USP6NL-202ENST00000379237 TEX35Q5T0J7 233 aa13.31□□□□□ -0.28
USP6NL-202ENST00000379237 NKTRP30414 1462 aaKnown RBP13.31□□□□□ -0.28
USP6NL-202ENST00000379237 RBM25P49756 843 aaKnown RBP13.31□□□□□ -0.28
USP6NL-202ENST00000379237 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
USP6NL-202ENST00000379237 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
USP6NL-202ENST00000379237 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
USP6NL-202ENST00000379237 CFAP44Q96MT7 982 aa13.31□□□□□ -0.28
USP6NL-202ENST00000379237 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
USP6NL-202ENST00000379237 ESF1Q9H501 851 aaKnown RBP13.31□□□□□ -0.28
USP6NL-202ENST00000379237 ATP2B3Q16720 1220 aa13.3□□□□□ -0.28
USP6NL-202ENST00000379237 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
USP6NL-202ENST00000379237 SNX21Q969T3 373 aa13.3□□□□□ -0.28
USP6NL-202ENST00000379237 NINLQ9Y2I6 1382 aa13.3□□□□□ -0.28
USP6NL-202ENST00000379237 ZNF445P59923 1031 aa13.3□□□□□ -0.28
USP6NL-202ENST00000379237 TSPYL1Q9H0U9 437 aa13.3□□□□□ -0.28
USP6NL-202ENST00000379237 GOLGA6L4A6NEF3 574 aa13.29□□□□□ -0.28
USP6NL-202ENST00000379237 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
USP6NL-202ENST00000379237 CUX1P39880 1505 aa13.29□□□□□ -0.28
USP6NL-202ENST00000379237 MVPQ14764 893 aaKnown RBP13.29□□□□□ -0.28
USP6NL-202ENST00000379237 RABEP1Q15276 862 aa13.29□□□□□ -0.28
USP6NL-202ENST00000379237 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
USP6NL-202ENST00000379237 GOLGA6L1Q8N7Z2 621 aa13.29□□□□□ -0.28
USP6NL-202ENST00000379237 OGFRQ9NZT2 677 aa13.29□□□□□ -0.28
USP6NL-202ENST00000379237 FEZ1Q99689 392 aa13.29□□□□□ -0.28
USP6NL-202ENST00000379237 PCF11O94913 1555 aaKnown RBP13.28□□□□□ -0.28
USP6NL-202ENST00000379237 TPD52L1Q16890 204 aaPredicted RBP13.28□□□□□ -0.28
USP6NL-202ENST00000379237 TMEM51Q9NW97 253 aa13.28□□□□□ -0.28
USP6NL-202ENST00000379237 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
USP6NL-202ENST00000379237 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
USP6NL-202ENST00000379237 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
USP6NL-202ENST00000379237 ADCY5O95622 1261 aa13.27□□□□□ -0.28
USP6NL-202ENST00000379237 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.28
USP6NL-202ENST00000379237 PARD3Q8TEW0 1356 aa13.27□□□□□ -0.28
USP6NL-202ENST00000379237 SPATA31E1Q6ZUB1 1445 aa13.27□□□□□ -0.29
USP6NL-202ENST00000379237 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.29
USP6NL-202ENST00000379237 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-202ENST00000379237 TNNQ9UQP3 1299 aa13.27□□□□□ -0.29
USP6NL-202ENST00000379237 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-202ENST00000379237 MCCP23508 829 aa13.27□□□□□ -0.29
USP6NL-202ENST00000379237 GTF2F1P35269 517 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP6NL-202ENST00000379237 NGEFQ8N5V2 710 aa13.26□□□□□ -0.29
USP6NL-202ENST00000379237 CDC45O75419 566 aa13.26□□□□□ -0.29
USP6NL-202ENST00000379237 TPM3P06753 285 aa13.26□□□□□ -0.29
USP6NL-202ENST00000379237 RARSP54136 660 aaKnown RBP13.26□□□□□ -0.29
USP6NL-202ENST00000379237 GPS2Q13227 327 aa13.26□□□□□ -0.29
USP6NL-202ENST00000379237 KRT222Q8N1A0 295 aa13.26□□□□□ -0.29
USP6NL-202ENST00000379237 C16orf45Q96MC5 204 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-202ENST00000379237 CHMP3Q9Y3E7 222 aa13.26□□□□□ -0.29
USP6NL-202ENST00000379237 RIOK3O14730 519 aaKnown RBP13.25□□□□□ -0.29
USP6NL-202ENST00000379237 FAM184AQ8NB25 1140 aa13.25□□□□□ -0.29
USP6NL-202ENST00000379237 PIBF1Q8WXW3 757 aa13.25□□□□□ -0.29
USP6NL-202ENST00000379237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.24□□□□□ -0.29
USP6NL-202ENST00000379237 GABPB1Q06547 395 aaPredicted RBP13.24□□□□□ -0.29
USP6NL-202ENST00000379237 ZFP91Q96JP5 570 aaPredicted RBP13.24□□□□□ -0.29
USP6NL-202ENST00000379237 RLBP1P12271 317 aa13.24□□□□□ -0.29
USP6NL-202ENST00000379237 WWC1Q8IX03 1113 aa13.23□□□□□ -0.29
USP6NL-202ENST00000379237 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
USP6NL-202ENST00000379237 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
USP6NL-202ENST00000379237 NRDCO43847 1150 aa13.23□□□□□ -0.29
USP6NL-202ENST00000379237 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
USP6NL-202ENST00000379237 GDPD2Q9HCC8 539 aa13.22□□□□□ -0.29
USP6NL-202ENST00000379237 SENP3Q9H4L4 574 aaPredicted RBP13.22□□□□□ -0.29
USP6NL-202ENST00000379237 GPATCH11Q8N954 259 aa13.22□□□□□ -0.29
USP6NL-202ENST00000379237 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
USP6NL-202ENST00000379237 NEK4P51957 841 aa13.21□□□□□ -0.29
USP6NL-202ENST00000379237 ZBTB9Q96C00 473 aa13.21□□□□□ -0.29
USP6NL-202ENST00000379237 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.29
USP6NL-202ENST00000379237 TNNT1P13805 278 aa13.21□□□□□ -0.29
USP6NL-202ENST00000379237 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.29
USP6NL-202ENST00000379237 LMBRD1Q9NUN5 540 aa13.21□□□□□ -0.29
USP6NL-202ENST00000379237 GTF2A1P52655 376 aaPredicted RBP13.21□□□□□ -0.3
USP6NL-202ENST00000379237 NOL10Q9BSC4 688 aaKnown RBP13.2□□□□□ -0.3
USP6NL-202ENST00000379237 TRIM5Q9C035 493 aa13.2□□□□□ -0.3
USP6NL-202ENST00000379237 REC8O95072 547 aa13.2□□□□□ -0.3
USP6NL-202ENST00000379237 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
USP6NL-202ENST00000379237 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
USP6NL-202ENST00000379237 TMX1Q9H3N1 280 aa13.2□□□□□ -0.3
USP6NL-202ENST00000379237 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
USP6NL-202ENST00000379237 TMEM63CQ9P1W3 806 aa13.2□□□□□ -0.3
USP6NL-202ENST00000379237 ZRSR1Q15695 479 aaKnown RBP13.2□□□□□ -0.3
USP6NL-202ENST00000379237 C1orf115Q9H7X2 142 aa13.2□□□□□ -0.3
USP6NL-202ENST00000379237 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP6NL-202ENST00000379237 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
USP6NL-202ENST00000379237 TBC1D9Q6ZT07 1266 aa13.19□□□□□ -0.3
USP6NL-202ENST00000379237 POLR3GO15318 223 aaPredicted RBP13.19□□□□□ -0.3
USP6NL-202ENST00000379237 KIAA1107Q9UPP5 1409 aa13.19□□□□□ -0.3
USP6NL-202ENST00000379237 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
USP6NL-202ENST00000379237 ZMYM4Q5VZL5 1548 aa13.18□□□□□ -0.3
USP6NL-202ENST00000379237 FIBPO43427 364 aa13.18□□□□□ -0.3
USP6NL-202ENST00000379237 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
USP6NL-202ENST00000379237 PDLIM2Q96JY6 352 aa13.18□□□□□ -0.3
USP6NL-202ENST00000379237 TOMM22Q9NS69 142 aa13.17□□□□□ -0.3
USP6NL-202ENST00000379237 ARGLU1Q9NWB6 273 aaPredicted RBP13.17□□□□□ -0.3
USP6NL-202ENST00000379237 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
USP6NL-202ENST00000379237 SRPK2P78362 688 aaKnown RBP13.17□□□□□ -0.3
USP6NL-202ENST00000379237 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms