RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 DHX57Q6P158 1386 aaKnown RBP24.9■■□□□ 1.58
RER1-202ENST00000378512 STAC3Q96MF2 364 aa24.89■■□□□ 1.58
RER1-202ENST00000378512 STK26Q9P289 416 aa24.89■■□□□ 1.58
RER1-202ENST00000378512 LRPPRCP42704 1394 aaKnown RBP24.89■■□□□ 1.58
RER1-202ENST00000378512 ABCC11Q96J66 1382 aa24.89■■□□□ 1.58
RER1-202ENST00000378512 TMEM132EQ6IEE7 984 aa24.88■■□□□ 1.57
RER1-202ENST00000378512 PNPLA6Q8IY17 1366 aa24.87■■□□□ 1.57
RER1-202ENST00000378512 LRRC59Q96AG4 307 aaKnown RBP24.86■■□□□ 1.57
RER1-202ENST00000378512 YTHDC2Q9H6S0 1430 aaKnown RBP24.86■■□□□ 1.57
RER1-202ENST00000378512 TRIM26Q12899 539 aaPredicted RBP24.86■■□□□ 1.57
RER1-202ENST00000378512 WAPLQ7Z5K2 1190 aa24.86■■□□□ 1.57
RER1-202ENST00000378512 ADGRB1O14514 1584 aa24.85■■□□□ 1.57
RER1-202ENST00000378512 PLEKHH1Q9ULM0 1364 aa24.85■■□□□ 1.57
RER1-202ENST00000378512 CDC42BPGQ6DT37 1551 aa24.83■■□□□ 1.57
RER1-202ENST00000378512 CFAP70Q5T0N1 1121 aa24.82■■□□□ 1.56
RER1-202ENST00000378512 ZNF772Q68DY9 489 aaPredicted RBP24.81■■□□□ 1.56
RER1-202ENST00000378512 DCAF11Q8TEB1 546 aa24.81■■□□□ 1.56
RER1-202ENST00000378512 SIRT1Q96EB6 747 aa24.81■■□□□ 1.56
RER1-202ENST00000378512 AFF2P51816 1311 aa24.8■■□□□ 1.56
RER1-202ENST00000378512 SOS2Q07890 1332 aaPredicted RBP24.8■■□□□ 1.56
RER1-202ENST00000378512 NUTM2FA1L443 756 aa24.8■■□□□ 1.56
RER1-202ENST00000378512 DLC1Q96QB1 1528 aa24.79■■□□□ 1.56
RER1-202ENST00000378512 KIAA1210Q9ULL0 1709 aa24.78■■□□□ 1.56
RER1-202ENST00000378512 C8orf37Q96NL8 207 aa24.78■■□□□ 1.56
RER1-202ENST00000378512 ESCO1Q5FWF5 840 aa24.77■■□□□ 1.56
RER1-202ENST00000378512 ADAMTS2O95450 1211 aa24.76■■□□□ 1.55
RER1-202ENST00000378512 XPCQ01831 940 aaPredicted RBP24.75■■□□□ 1.55
RER1-202ENST00000378512 KDM2AQ9Y2K7 1162 aa24.75■■□□□ 1.55
RER1-202ENST00000378512 PXDNQ92626 1479 aa24.73■■□□□ 1.55
RER1-202ENST00000378512 RXRBP28702 533 aa24.72■■□□□ 1.55
RER1-202ENST00000378512 FMN2Q9NZ56 1722 aa24.72■■□□□ 1.55
RER1-202ENST00000378512 FOXO3O43524 673 aa24.7■■□□□ 1.55
RER1-202ENST00000378512 COL22A1Q8NFW1 1626 aaPredicted RBP24.68■■□□□ 1.54
RER1-202ENST00000378512 ARHGEF28Q8N1W1 1705 aaKnown RBP24.68■■□□□ 1.54
RER1-202ENST00000378512 ADGRB2O60241 1585 aa24.68■■□□□ 1.54
RER1-202ENST00000378512 NPHP3Q7Z494 1330 aa24.68■■□□□ 1.54
RER1-202ENST00000378512 SAFB2Q14151 953 aaKnown RBP eCLIP24.67■■□□□ 1.54
RER1-202ENST00000378512 NGLY1Q96IV0 654 aa24.67■■□□□ 1.54
RER1-202ENST00000378512 SIN3AQ96ST3 1273 aa24.66■■□□□ 1.54
RER1-202ENST00000378512 QTRT2Q9H974 415 aaKnown RBP24.66■■□□□ 1.54
RER1-202ENST00000378512 RGS12O14924 1447 aa24.64■■□□□ 1.54
RER1-202ENST00000378512 PRAM1Q96QH2 718 aa24.64■■□□□ 1.54
RER1-202ENST00000378512 RGPD8O14715 1765 aaPredicted RBP24.63■■□□□ 1.53
RER1-202ENST00000378512 CDK12Q9NYV4 1490 aaPredicted RBP24.63■■□□□ 1.53
RER1-202ENST00000378512 UPF1Q92900 1129 aaKnown RBP eCLIP24.62■■□□□ 1.532e-11■■□□□ 12
RER1-202ENST00000378512 L3MBTL2Q969R5 705 aa24.62■■□□□ 1.53
RER1-202ENST00000378512 TRAK1Q9UPV9 953 aa24.6■■□□□ 1.53
RER1-202ENST00000378512 TRPM1Q7Z4N2 1603 aa24.59■■□□□ 1.53
RER1-202ENST00000378512 RBM6P78332 1123 aaKnown RBP24.59■■□□□ 1.53
RER1-202ENST00000378512 USP21Q9UK80 565 aa24.59■■□□□ 1.53
RER1-202ENST00000378512 KIF1AQ12756 1690 aa24.59■■□□□ 1.53
RER1-202ENST00000378512 USP32Q8NFA0 1604 aa24.58■■□□□ 1.53
RER1-202ENST00000378512 FNBP4Q8N3X1 1017 aaPredicted RBP24.57■■□□□ 1.52
RER1-202ENST00000378512 SPATA31A3Q5VYP0 1347 aa24.56■■□□□ 1.52
RER1-202ENST00000378512 KRT28Q7Z3Y7 464 aa24.55■■□□□ 1.52
RER1-202ENST00000378512 POGKQ9P215 609 aa24.55■■□□□ 1.52
RER1-202ENST00000378512 MARF1Q9Y4F3 1742 aaKnown RBP24.55■■□□□ 1.52
RER1-202ENST00000378512 NBPF1Q3BBV0 1214 aa24.54■■□□□ 1.52
RER1-202ENST00000378512 HIRIP3Q9BW71 556 aaPredicted RBP24.54■■□□□ 1.52
RER1-202ENST00000378512 PHF8Q9UPP1 1060 aa24.54■■□□□ 1.52
RER1-202ENST00000378512 NEUROD1Q13562 356 aa24.53■■□□□ 1.52
RER1-202ENST00000378512 ATRNO75882 1429 aa24.53■■□□□ 1.52
RER1-202ENST00000378512 ANKARQ7Z5J8 1434 aa24.53■■□□□ 1.52
RER1-202ENST00000378512 BCL9LQ86UU0 1499 aa24.53■■□□□ 1.52
RER1-202ENST00000378512 PLEKHG5O94827 1062 aa24.52■■□□□ 1.52
RER1-202ENST00000378512 TRPC5Q9UL62 973 aaPredicted RBP24.51■■□□□ 1.51
RER1-202ENST00000378512 MINK1Q8N4C8 1332 aaPredicted RBP24.5■■□□□ 1.51
RER1-202ENST00000378512 PMFBP1Q8TBY8 1022 aa24.5■■□□□ 1.51
RER1-202ENST00000378512 TULP4Q9NRJ4 1543 aa24.49■■□□□ 1.51
RER1-202ENST00000378512 TNS3Q68CZ2 1445 aa24.48■■□□□ 1.51
RER1-202ENST00000378512 CABLES1Q8TDN4 633 aa24.48■■□□□ 1.51
RER1-202ENST00000378512 PRR36Q9H6K5 1346 aa24.47■■□□□ 1.51
RER1-202ENST00000378512 EIF3AQ14152 1382 aaKnown RBP24.46■■□□□ 1.51
RER1-202ENST00000378512 WASLO00401 505 aaPredicted RBP24.45■■□□□ 1.51
RER1-202ENST00000378512 ITSN1Q15811 1721 aa24.44■■□□□ 1.5
RER1-202ENST00000378512 ABCA3Q99758 1704 aa24.44■■□□□ 1.5
RER1-202ENST00000378512 PSME1Q06323 249 aa24.44■■□□□ 1.5
RER1-202ENST00000378512 GPRASP1Q5JY77 1395 aa24.43■■□□□ 1.5
RER1-202ENST00000378512 QRICH2Q9H0J4 1663 aa24.43■■□□□ 1.5
RER1-202ENST00000378512 NBPF8Q3BBV2 869 aa24.43■■□□□ 1.5
RER1-202ENST00000378512 LMOD2Q6P5Q4 547 aa24.43■■□□□ 1.5
RER1-202ENST00000378512 SLIT2O94813 1529 aa24.42■■□□□ 1.5
RER1-202ENST00000378512 SBNO1A3KN83 1393 aa24.42■■□□□ 1.5
RER1-202ENST00000378512 ATP7BP35670 1465 aa24.42■■□□□ 1.5
RER1-202ENST00000378512 TOPAZ1Q8N9V7 1692 aa24.42■■□□□ 1.5
RER1-202ENST00000378512 TRPM3Q9HCF6 1732 aaPredicted RBP24.41■■□□□ 1.5
RER1-202ENST00000378512 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.4■■□□□ 1.5
RER1-202ENST00000378512 TONSLQ96HA7 1378 aa24.4■■□□□ 1.5
RER1-202ENST00000378512 GLI3P10071 1580 aa24.39■■□□□ 1.5
RER1-202ENST00000378512 GJD4Q96KN9 370 aaPredicted RBP24.39■■□□□ 1.5
RER1-202ENST00000378512 UNC5CLQ8IV45 518 aa24.38■■□□□ 1.49
RER1-202ENST00000378512 ROCK2O75116 1388 aaKnown RBP24.38■■□□□ 1.49
RER1-202ENST00000378512 CENPJQ9HC77 1338 aaPredicted RBP24.37■■□□□ 1.49
RER1-202ENST00000378512 HAP1P54257 671 aaPredicted RBP24.37■■□□□ 1.49
RER1-202ENST00000378512 RALGAPBQ86X10 1494 aa24.37■■□□□ 1.49
RER1-202ENST00000378512 PLCH1Q4KWH8 1693 aa24.37■■□□□ 1.49
RER1-202ENST00000378512 ATAD2Q6PL18 1390 aa24.36■■□□□ 1.49
RER1-202ENST00000378512 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
RER1-202ENST00000378512 ARHGEF10O15013 1369 aa24.35■■□□□ 1.49
RER1-202ENST00000378512 EP400Q96L91 3159 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms