RNA–Protein interactions for RNA: ENST00000378247.7

SPIRE2-201, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPIRE2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-201ENST00000378247 HSP90AA2PQ14568 343 aaPredicted RBP23.85■■□□□ 1.41
SPIRE2-201ENST00000378247 SMC4Q9NTJ3 1288 aa23.85■■□□□ 1.41
SPIRE2-201ENST00000378247 ABCC1P33527 1531 aa23.85■■□□□ 1.41
SPIRE2-201ENST00000378247 LNPKQ9C0E8 428 aa23.85■■□□□ 1.41
SPIRE2-201ENST00000378247 ASXL1Q8IXJ9 1541 aa23.85■■□□□ 1.41
SPIRE2-201ENST00000378247 TMEM132EQ6IEE7 984 aa23.84■■□□□ 1.41
SPIRE2-201ENST00000378247 GGT6Q6P531 493 aa23.84■■□□□ 1.41
SPIRE2-201ENST00000378247 HSCBQ8IWL3 235 aa23.84■■□□□ 1.41
SPIRE2-201ENST00000378247 ADGRL1O94910 1474 aa23.83■■□□□ 1.41
SPIRE2-201ENST00000378247 CHMP5Q9NZZ3 219 aa23.83■■□□□ 1.41
SPIRE2-201ENST00000378247 KANK1Q14678 1352 aa23.83■■□□□ 1.41
SPIRE2-201ENST00000378247 MAST1Q9Y2H9 1570 aa23.82■■□□□ 1.4
SPIRE2-201ENST00000378247 ARID3AQ99856 593 aa23.82■■□□□ 1.4
SPIRE2-201ENST00000378247 ADGRF5Q8IZF2 1346 aa23.82■■□□□ 1.4
SPIRE2-201ENST00000378247 NLRP1Q9C000 1473 aa23.81■■□□□ 1.4
SPIRE2-201ENST00000378247 TRIM44Q96DX7 344 aaPredicted RBP23.81■■□□□ 1.4
SPIRE2-201ENST00000378247 ERBB4Q15303 1308 aa23.81■■□□□ 1.4
SPIRE2-201ENST00000378247 INSRP06213 1382 aa23.81■■□□□ 1.4
SPIRE2-201ENST00000378247 RUNDC1Q96C34 613 aa23.81■■□□□ 1.4
SPIRE2-201ENST00000378247 GRPEL1Q9HAV7 217 aa23.81■■□□□ 1.4
SPIRE2-201ENST00000378247 DZIP1LQ8IYY4 767 aaKnown RBP23.79■■□□□ 1.4
SPIRE2-201ENST00000378247 ZBTB7CA1YPR0 619 aa23.79■■□□□ 1.4
SPIRE2-201ENST00000378247 HSP90AB1P08238 724 aaKnown RBP23.79■■□□□ 1.4
SPIRE2-201ENST00000378247 EXOSC9Q06265 439 aaKnown RBP23.79■■□□□ 1.4
SPIRE2-201ENST00000378247 GAS2L3Q86XJ1 694 aa23.79■■□□□ 1.4
SPIRE2-201ENST00000378247 PIK3C2GO75747 1445 aa23.78■■□□□ 1.4
SPIRE2-201ENST00000378247 PLXNC1O60486 1568 aa23.78■■□□□ 1.4
SPIRE2-201ENST00000378247 MVPQ14764 893 aaKnown RBP23.78■■□□□ 1.4
SPIRE2-201ENST00000378247 PKNOX2Q96KN3 472 aa23.78■■□□□ 1.4
SPIRE2-201ENST00000378247 RBM42Q9BTD8 480 aaKnown RBP23.77■■□□□ 1.4
SPIRE2-201ENST00000378247 ZKSCAN2Q63HK3 967 aa23.77■■□□□ 1.4
SPIRE2-201ENST00000378247 C1orf115Q9H7X2 142 aa23.76■■□□□ 1.39
SPIRE2-201ENST00000378247 FSD2A1L4K1 749 aa23.76■■□□□ 1.39
SPIRE2-201ENST00000378247 CYB5RLQ6IPT4 315 aa23.76■■□□□ 1.39
SPIRE2-201ENST00000378247 ZMYND15Q9H091 742 aa23.76■■□□□ 1.39
SPIRE2-201ENST00000378247 UNC13BO14795 1591 aa23.75■■□□□ 1.39
SPIRE2-201ENST00000378247 ESPNB1AK53 854 aa23.74■■□□□ 1.39
SPIRE2-201ENST00000378247 NCLP19338 710 aaKnown RBP23.74■■□□□ 1.39
SPIRE2-201ENST00000378247 TNPO1Q92973 898 aaKnown RBP23.74■■□□□ 1.39
SPIRE2-201ENST00000378247 TRIM27P14373 513 aa23.73■■□□□ 1.39
SPIRE2-201ENST00000378247 CLCN1P35523 988 aa23.73■■□□□ 1.39
SPIRE2-201ENST00000378247 MRE11P49959 708 aa23.73■■□□□ 1.39
SPIRE2-201ENST00000378247 RAPGEF3O95398 923 aa23.73■■□□□ 1.39
SPIRE2-201ENST00000378247 RTEL1-TNFRSF6BF6WH68 1400 aa23.72■■□□□ 1.39
SPIRE2-201ENST00000378247 ELL2O00472 640 aaPredicted RBP23.72■■□□□ 1.39
SPIRE2-201ENST00000378247 NOB1Q9ULX3 412 aaKnown RBP23.72■■□□□ 1.39
SPIRE2-201ENST00000378247 SCAF11Q99590 1463 aaKnown RBP23.72■■□□□ 1.39
SPIRE2-201ENST00000378247 SSH1Q8WYL5 1049 aa23.72■■□□□ 1.39
SPIRE2-201ENST00000378247 NSD3Q9BZ95 1437 aa23.72■■□□□ 1.39
SPIRE2-201ENST00000378247 GLIPR1L2Q4G1C9 344 aa23.72■■□□□ 1.39
SPIRE2-201ENST00000378247 CD109Q6YHK3 1445 aa23.71■■□□□ 1.39
SPIRE2-201ENST00000378247 CD2BP2O95400 341 aaKnown RBP23.71■■□□□ 1.39
SPIRE2-201ENST00000378247 IQGAP3Q86VI3 1631 aa23.71■■□□□ 1.39
SPIRE2-201ENST00000378247 TMEM57Q8N5G2 664 aa23.7■■□□□ 1.38
SPIRE2-201ENST00000378247 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
SPIRE2-201ENST00000378247 ATP7AQ04656 1500 aa23.69■■□□□ 1.38
SPIRE2-201ENST00000378247 ANKRD45Q5TZF3 282 aa23.67■■□□□ 1.38
SPIRE2-201ENST00000378247 CFAP53Q96M91 514 aa23.67■■□□□ 1.38
SPIRE2-201ENST00000378247 RBM10P98175 930 aaKnown RBP23.66■■□□□ 1.38
SPIRE2-201ENST00000378247 FBLN1P23142 703 aa23.66■■□□□ 1.38
SPIRE2-201ENST00000378247 GGNBP2Q9H3C7 697 aa23.65■■□□□ 1.38
SPIRE2-201ENST00000378247 DDX11L8A8MPP1 907 aa23.64■■□□□ 1.37
SPIRE2-201ENST00000378247 SSFA2P28290 1259 aa23.64■■□□□ 1.37
SPIRE2-201ENST00000378247 CABP2Q9NPB3 220 aa23.64■■□□□ 1.37
SPIRE2-201ENST00000378247 APBB1O00213 710 aa23.63■■□□□ 1.37
SPIRE2-201ENST00000378247 EIF2AK4Q9P2K8 1649 aaKnown RBP23.63■■□□□ 1.37
SPIRE2-201ENST00000378247 TPRNQ4KMQ1 711 aa23.63■■□□□ 1.37
SPIRE2-201ENST00000378247 FOXD4L5Q5VV16 416 aaPredicted RBP23.63■■□□□ 1.37
SPIRE2-201ENST00000378247 FOXD4L4Q8WXT5 416 aaPredicted RBP23.63■■□□□ 1.37
SPIRE2-201ENST00000378247 STK26Q9P289 416 aa23.63■■□□□ 1.37
SPIRE2-201ENST00000378247 ATP10AO60312 1499 aa23.62■■□□□ 1.37
SPIRE2-201ENST00000378247 WDR63Q8IWG1 891 aa23.61■■□□□ 1.37
SPIRE2-201ENST00000378247 CHAMP1Q96JM3 812 aa23.61■■□□□ 1.37
SPIRE2-201ENST00000378247 ARAP3Q8WWN8 1544 aa23.61■■□□□ 1.37
SPIRE2-201ENST00000378247 ZNF692Q9BU19 519 aaPredicted RBP23.61■■□□□ 1.37
SPIRE2-201ENST00000378247 ATF7IPQ6VMQ6 1270 aa23.6■■□□□ 1.37
SPIRE2-201ENST00000378247 THUMPD2Q9BTF0 503 aaKnown RBP23.6■■□□□ 1.37
SPIRE2-201ENST00000378247 UGGT1Q9NYU2 1555 aa23.6■■□□□ 1.37
SPIRE2-201ENST00000378247 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
SPIRE2-201ENST00000378247 ERVK-7P63135 1459 aa23.59■■□□□ 1.37
SPIRE2-201ENST00000378247 DDX49Q9Y6V7 483 aaKnown RBP23.59■■□□□ 1.37
SPIRE2-201ENST00000378247 DDX19BQ9UMR2 479 aa23.57■■□□□ 1.36
SPIRE2-201ENST00000378247 POLR3AO14802 1390 aaPredicted RBP23.57■■□□□ 1.36
SPIRE2-201ENST00000378247 NINLQ9Y2I6 1382 aa23.57■■□□□ 1.36
SPIRE2-201ENST00000378247 RIPK4P57078 832 aa23.57■■□□□ 1.36
SPIRE2-201ENST00000378247 GBP4Q96PP9 640 aa23.57■■□□□ 1.36
SPIRE2-201ENST00000378247 SYNMO15061 1565 aa23.57■■□□□ 1.36
SPIRE2-201ENST00000378247 KIAA1211Q6ZU35 1233 aa23.56■■□□□ 1.36
SPIRE2-201ENST00000378247 ZNF518AQ6AHZ1 1483 aa23.55■■□□□ 1.36
SPIRE2-201ENST00000378247 GAS2L2Q8NHY3 880 aa23.55■■□□□ 1.36
SPIRE2-201ENST00000378247 MPNDQ8N594 471 aa23.54■■□□□ 1.36
SPIRE2-201ENST00000378247 NASPP49321 788 aaPredicted RBP23.54■■□□□ 1.36
SPIRE2-201ENST00000378247 MCTP1Q6DN14 999 aa23.54■■□□□ 1.36
SPIRE2-201ENST00000378247 TMPOP42166 694 aaKnown RBP23.53■■□□□ 1.36
SPIRE2-201ENST00000378247 CHD1LQ86WJ1 897 aa23.53■■□□□ 1.36
SPIRE2-201ENST00000378247 NGEFQ8N5V2 710 aa23.53■■□□□ 1.36
SPIRE2-201ENST00000378247 MADDQ8WXG6 1647 aa23.53■■□□□ 1.36
SPIRE2-201ENST00000378247 NPC1L1Q9UHC9 1359 aa23.52■■□□□ 1.36
SPIRE2-201ENST00000378247 VIRMAQ69YN4 1812 aaKnown RBP23.52■■□□□ 1.36
SPIRE2-201ENST00000378247 RRP9O43818 475 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms