RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 TONSLQ96HA7 1378 aa29.55■■■□□ 2.32
TRIM13-203ENST00000378183 TRPM1Q7Z4N2 1603 aa29.55■■■□□ 2.32
TRIM13-203ENST00000378183 ARHGEF28Q8N1W1 1705 aaKnown RBP29.54■■■□□ 2.32
TRIM13-203ENST00000378183 PRAM1Q96QH2 718 aa29.53■■■□□ 2.32
TRIM13-203ENST00000378183 CDC42BPGQ6DT37 1551 aa29.52■■■□□ 2.32
TRIM13-203ENST00000378183 NBPF8Q3BBV2 869 aa29.52■■■□□ 2.32
TRIM13-203ENST00000378183 CLSPNQ9HAW4 1339 aa29.49■■■□□ 2.31
TRIM13-203ENST00000378183 SAFB2Q14151 953 aaKnown RBP eCLIP29.48■■■□□ 2.31
TRIM13-203ENST00000378183 POGKQ9P215 609 aa29.47■■■□□ 2.31
TRIM13-203ENST00000378183 C1orf167Q5SNV9 1468 aa29.47■■■□□ 2.31
TRIM13-203ENST00000378183 BRINP3Q76B58 766 aa29.46■■■□□ 2.31
TRIM13-203ENST00000378183 FMN2Q9NZ56 1722 aa29.45■■■□□ 2.3
TRIM13-203ENST00000378183 CCER1Q8TC90 406 aaPredicted RBP29.43■■■□□ 2.3
TRIM13-203ENST00000378183 PHLPP1O60346 1717 aa29.42■■■□□ 2.3
TRIM13-203ENST00000378183 ADGRB2O60241 1585 aa29.42■■■□□ 2.3
TRIM13-203ENST00000378183 AHDC1Q5TGY3 1603 aaPredicted RBP29.39■■■□□ 2.3
TRIM13-203ENST00000378183 ROCK2O75116 1388 aaKnown RBP29.39■■■□□ 2.29
TRIM13-203ENST00000378183 ORAI2Q96SN7 254 aa29.38■■■□□ 2.29
TRIM13-203ENST00000378183 RGPD8O14715 1765 aaPredicted RBP29.38■■■□□ 2.29
TRIM13-203ENST00000378183 MINK1Q8N4C8 1332 aaPredicted RBP29.38■■■□□ 2.29
TRIM13-203ENST00000378183 NHSL1Q5SYE7 1610 aa29.38■■■□□ 2.29
TRIM13-203ENST00000378183 COL16A1Q07092 1604 aaPredicted RBP29.36■■■□□ 2.29
TRIM13-203ENST00000378183 NUTM2FA1L443 756 aa29.36■■■□□ 2.29
TRIM13-203ENST00000378183 HIRIP3Q9BW71 556 aaPredicted RBP29.36■■■□□ 2.29
TRIM13-203ENST00000378183 GPRASP1Q5JY77 1395 aa29.36■■■□□ 2.29
TRIM13-203ENST00000378183 RALGAPBQ86X10 1494 aa29.35■■■□□ 2.29
TRIM13-203ENST00000378183 USP32Q8NFA0 1604 aa29.33■■■□□ 2.29
TRIM13-203ENST00000378183 DDX17Q92841 729 aaKnown RBP29.32■■■□□ 2.28
TRIM13-203ENST00000378183 TIMELESSQ9UNS1 1208 aa29.32■■■□□ 2.28
TRIM13-203ENST00000378183 QRICH2Q9H0J4 1663 aa29.31■■■□□ 2.28
TRIM13-203ENST00000378183 ESCO1Q5FWF5 840 aa29.3■■■□□ 2.28
TRIM13-203ENST00000378183 CENPJQ9HC77 1338 aaPredicted RBP29.28■■■□□ 2.28
TRIM13-203ENST00000378183 WASLO00401 505 aaPredicted RBP29.28■■■□□ 2.28
TRIM13-203ENST00000378183 CARD11Q9BXL7 1154 aa29.25■■■□□ 2.27
TRIM13-203ENST00000378183 ANKARQ7Z5J8 1434 aa29.25■■■□□ 2.27
TRIM13-203ENST00000378183 TULP4Q9NRJ4 1543 aa29.25■■■□□ 2.27
TRIM13-203ENST00000378183 KIF1AQ12756 1690 aa29.24■■■□□ 2.27
TRIM13-203ENST00000378183 PRR36Q9H6K5 1346 aa29.23■■■□□ 2.27
TRIM13-203ENST00000378183 CDK19Q9BWU1 502 aa29.21■■■□□ 2.27
TRIM13-203ENST00000378183 SOS2Q07890 1332 aaPredicted RBP29.2■■■□□ 2.27
TRIM13-203ENST00000378183 EIF3AQ14152 1382 aaKnown RBP29.2■■■□□ 2.26
TRIM13-203ENST00000378183 JCADQ9P266 1359 aa29.2■■■□□ 2.26
TRIM13-203ENST00000378183 SHPRHQ149N8 1683 aa29.19■■■□□ 2.26
TRIM13-203ENST00000378183 FOXO3O43524 673 aa29.19■■■□□ 2.26
TRIM13-203ENST00000378183 PXDNQ92626 1479 aa29.18■■■□□ 2.26
TRIM13-203ENST00000378183 PHF8Q9UPP1 1060 aa29.18■■■□□ 2.26
TRIM13-203ENST00000378183 MED1Q15648 1581 aaPredicted RBP29.18■■■□□ 2.26
TRIM13-203ENST00000378183 ATP7BP35670 1465 aa29.17■■■□□ 2.26
TRIM13-203ENST00000378183 NPHP3Q7Z494 1330 aa29.17■■■□□ 2.26
TRIM13-203ENST00000378183 ITSN1Q15811 1721 aa29.15■■■□□ 2.26
TRIM13-203ENST00000378183 LRRC59Q96AG4 307 aaKnown RBP29.15■■■□□ 2.26
TRIM13-203ENST00000378183 NUDT16Q96DE0 195 aaKnown RBP29.15■■■□□ 2.26
TRIM13-203ENST00000378183 XPCQ01831 940 aaPredicted RBP29.14■■■□□ 2.26
TRIM13-203ENST00000378183 TOPAZ1Q8N9V7 1692 aa29.14■■■□□ 2.26
TRIM13-203ENST00000378183 PMFBP1Q8TBY8 1022 aa29.13■■■□□ 2.25
TRIM13-203ENST00000378183 CABP2Q9NPB3 220 aa29.1■■■□□ 2.25
TRIM13-203ENST00000378183 PNPLA6Q8IY17 1366 aa29.09■■■□□ 2.25
TRIM13-203ENST00000378183 SRPK2P78362 688 aaKnown RBP29.08■■■□□ 2.25
TRIM13-203ENST00000378183 KRT28Q7Z3Y7 464 aa29.08■■■□□ 2.25
TRIM13-203ENST00000378183 SBNO2Q9Y2G9 1366 aa29.08■■■□□ 2.25
TRIM13-203ENST00000378183 EVC2Q86UK5 1308 aa29.07■■■□□ 2.24
TRIM13-203ENST00000378183 SPATA31A6Q5VVP1 1343 aa29.06■■■□□ 2.24
TRIM13-203ENST00000378183 CCDC61Q9Y6R9 512 aa29.05■■■□□ 2.24
TRIM13-203ENST00000378183 LRP6O75581 1613 aa29.05■■■□□ 2.24
TRIM13-203ENST00000378183 TRPM3Q9HCF6 1732 aaPredicted RBP29.03■■■□□ 2.24
TRIM13-203ENST00000378183 COL22A1Q8NFW1 1626 aaPredicted RBP29.03■■■□□ 2.24
TRIM13-203ENST00000378183 ST20-MTHFSA0A0A6YYL1 179 aa29.03■■■□□ 2.24
TRIM13-203ENST00000378183 PSME1Q06323 249 aa29.03■■■□□ 2.24
TRIM13-203ENST00000378183 DISP3Q9P2K9 1392 aa29.02■■■□□ 2.24
TRIM13-203ENST00000378183 USP47Q96K76 1375 aa29.01■■■□□ 2.24
TRIM13-203ENST00000378183 SPATA31A3Q5VYP0 1347 aa29.01■■■□□ 2.23
TRIM13-203ENST00000378183 PLEKHG3A1L390 1219 aa29.01■■■□□ 2.23
TRIM13-203ENST00000378183 TESK2Q96S53 571 aa29.01■■■□□ 2.23
TRIM13-203ENST00000378183 NGDNQ8NEJ9 315 aaKnown RBP29■■■□□ 2.23
TRIM13-203ENST00000378183 PPIP5K1Q6PFW1 1433 aa29■■■□□ 2.23
TRIM13-203ENST00000378183 POLR3AO14802 1390 aaPredicted RBP29■■■□□ 2.23
TRIM13-203ENST00000378183 SBNO1A3KN83 1393 aa28.99■■■□□ 2.23
TRIM13-203ENST00000378183 ACEP12821 1306 aa28.97■■■□□ 2.23
TRIM13-203ENST00000378183 TNS3Q68CZ2 1445 aa28.97■■■□□ 2.23
TRIM13-203ENST00000378183 NUTM2BA6NNL0 878 aaPredicted RBP28.97■■■□□ 2.23
TRIM13-203ENST00000378183 NUTM2EB1AL46 878 aaPredicted RBP28.97■■■□□ 2.23
TRIM13-203ENST00000378183 NUTM2AQ8IVF1 878 aaPredicted RBP28.97■■■□□ 2.23
TRIM13-203ENST00000378183 ALS2Q96Q42 1657 aa28.96■■■□□ 2.23
TRIM13-203ENST00000378183 CABP1Q9NZU7 370 aa28.95■■■□□ 2.22
TRIM13-203ENST00000378183 ATAD2Q6PL18 1390 aa28.9■■■□□ 2.22
TRIM13-203ENST00000378183 RGS17Q9UGC6 210 aaPredicted RBP28.9■■■□□ 2.22
TRIM13-203ENST00000378183 PHF23Q9BUL5 403 aaPredicted RBP28.89■■■□□ 2.22
TRIM13-203ENST00000378183 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
TRIM13-203ENST00000378183 ABCA3Q99758 1704 aa28.87■■■□□ 2.21
TRIM13-203ENST00000378183 MEX3CQ5U5Q3 659 aaKnown RBP28.87■■■□□ 2.21
TRIM13-203ENST00000378183 LMOD2Q6P5Q4 547 aa28.87■■■□□ 2.21
TRIM13-203ENST00000378183 ARHGEF10O15013 1369 aa28.87■■■□□ 2.21
TRIM13-203ENST00000378183 MARF1Q9Y4F3 1742 aaKnown RBP28.86■■■□□ 2.21
TRIM13-203ENST00000378183 PUS7Q96PZ0 661 aaKnown RBP28.86■■■□□ 2.21
TRIM13-203ENST00000378183 PAK3O75914 559 aaPredicted RBP28.85■■■□□ 2.21
TRIM13-203ENST00000378183 SLC24A1O60721 1099 aa28.84■■■□□ 2.21
TRIM13-203ENST00000378183 ADAMTS2O95450 1211 aa28.84■■■□□ 2.21
TRIM13-203ENST00000378183 CABLES1Q8TDN4 633 aa28.83■■■□□ 2.21
TRIM13-203ENST00000378183 USP6P35125 1406 aa28.83■■■□□ 2.21
TRIM13-203ENST00000378183 CRYBG1Q9Y4K1 1723 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms