RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ZRANB1Q9UGI0 708 aa10.54□□□□□ -0.72
CKAP2-203ENST00000378037 ZNF330Q9Y3S2 320 aaPredicted RBP10.54□□□□□ -0.72
CKAP2-203ENST00000378037 ROCK1Q13464 1354 aa10.54□□□□□ -0.72
CKAP2-203ENST00000378037 RPRD2Q5VT52 1461 aaKnown RBP10.53□□□□□ -0.72
CKAP2-203ENST00000378037 BCAR3O75815 825 aa10.53□□□□□ -0.72
CKAP2-203ENST00000378037 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
CKAP2-203ENST00000378037 GOLGA2Q08379 1002 aa10.53□□□□□ -0.72
CKAP2-203ENST00000378037 C20orf194Q5TEA3 1177 aa10.53□□□□□ -0.72
CKAP2-203ENST00000378037 ATP10AO60312 1499 aa10.53□□□□□ -0.72
CKAP2-203ENST00000378037 PANK1Q8TE04 598 aa10.53□□□□□ -0.72
CKAP2-203ENST00000378037 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
CKAP2-203ENST00000378037 USP35Q9P2H5 1018 aa10.52□□□□□ -0.73
CKAP2-203ENST00000378037 EID1Q9Y6B2 187 aa10.52□□□□□ -0.73
CKAP2-203ENST00000378037 POLR1AO95602 1720 aaPredicted RBP10.52□□□□□ -0.73
CKAP2-203ENST00000378037 SPATA31D1Q6ZQQ2 1576 aa10.52□□□□□ -0.73
CKAP2-203ENST00000378037 MADDQ8WXG6 1647 aa10.51□□□□□ -0.73
CKAP2-203ENST00000378037 PZPP20742 1482 aa10.51□□□□□ -0.73
CKAP2-203ENST00000378037 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.51□□□□□ -0.73
CKAP2-203ENST00000378037 CDK19Q9BWU1 502 aa10.51□□□□□ -0.73
CKAP2-203ENST00000378037 NOS1P29475 1434 aa10.51□□□□□ -0.73
CKAP2-203ENST00000378037 NPATQ14207 1427 aa10.51□□□□□ -0.73
CKAP2-203ENST00000378037 DCTN1Q14203 1278 aa10.51□□□□□ -0.73
CKAP2-203ENST00000378037 CAMSAP1Q5T5Y3 1602 aa10.51□□□□□ -0.73
CKAP2-203ENST00000378037 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
CKAP2-203ENST00000378037 EVC2Q86UK5 1308 aa10.51□□□□□ -0.73
CKAP2-203ENST00000378037 LMTK3Q96Q04 1460 aa10.5□□□□□ -0.73
CKAP2-203ENST00000378037 IQSEC2Q5JU85 1478 aa10.5□□□□□ -0.73
CKAP2-203ENST00000378037 ITPRIPQ8IWB1 547 aa10.5□□□□□ -0.73
CKAP2-203ENST00000378037 TERF2IPQ9NYB0 399 aa10.5□□□□□ -0.73
CKAP2-203ENST00000378037 ZBED9Q6R2W3 1325 aa10.5□□□□□ -0.73
CKAP2-203ENST00000378037 MYO3AQ8NEV4 1616 aa10.5□□□□□ -0.73
CKAP2-203ENST00000378037 SLC4A10Q6U841 1118 aa10.5□□□□□ -0.73
CKAP2-203ENST00000378037 SMC4Q9NTJ3 1288 aa10.5□□□□□ -0.73
CKAP2-203ENST00000378037 TET3O43151 1660 aa10.49□□□□□ -0.73
CKAP2-203ENST00000378037 AMPHP49418 695 aa10.49□□□□□ -0.73
CKAP2-203ENST00000378037 TCP11L2Q8N4U5 519 aa10.49□□□□□ -0.73
CKAP2-203ENST00000378037 DUOX2Q9NRD8 1548 aa10.49□□□□□ -0.73
CKAP2-203ENST00000378037 MIS18AQ9NYP9 233 aa10.49□□□□□ -0.73
CKAP2-203ENST00000378037 NGEFQ8N5V2 710 aa10.48□□□□□ -0.73
CKAP2-203ENST00000378037 NME9Q86XW9 330 aa10.48□□□□□ -0.73
CKAP2-203ENST00000378037 EIF3AQ14152 1382 aaKnown RBP10.48□□□□□ -0.73
CKAP2-203ENST00000378037 TESK2Q96S53 571 aa10.48□□□□□ -0.73
CKAP2-203ENST00000378037 ARHGAP31Q2M1Z3 1444 aa10.48□□□□□ -0.73
CKAP2-203ENST00000378037 CGNL1Q0VF96 1302 aa10.48□□□□□ -0.73
CKAP2-203ENST00000378037 RIPK4P57078 832 aa10.47□□□□□ -0.73
CKAP2-203ENST00000378037 EMILIN1Q9Y6C2 1016 aa10.47□□□□□ -0.73
CKAP2-203ENST00000378037 CSB-PGBD3P0DP91 1061 aa10.46□□□□□ -0.73
CKAP2-203ENST00000378037 RRP1P56182 461 aaKnown RBP10.46□□□□□ -0.73
CKAP2-203ENST00000378037 UGGT1Q9NYU2 1555 aa10.46□□□□□ -0.73
CKAP2-203ENST00000378037 RIMS1Q86UR5 1692 aaKnown RBP10.46□□□□□ -0.73
CKAP2-203ENST00000378037 CARD14Q9BXL6 1004 aa10.46□□□□□ -0.73
CKAP2-203ENST00000378037 USHBP1Q8N6Y0 703 aa10.46□□□□□ -0.74
CKAP2-203ENST00000378037 STRCQ7RTU9 1775 aa10.45□□□□□ -0.74
CKAP2-203ENST00000378037 IFT172Q9UG01 1749 aa10.45□□□□□ -0.74
CKAP2-203ENST00000378037 HSPA2P54652 639 aa10.45□□□□□ -0.74
CKAP2-203ENST00000378037 NLRP6P59044 892 aa10.45□□□□□ -0.74
CKAP2-203ENST00000378037 C1orf115Q9H7X2 142 aa10.45□□□□□ -0.74
CKAP2-203ENST00000378037 CCDC9Q9Y3X0 531 aaKnown RBP10.45□□□□□ -0.74
CKAP2-203ENST00000378037 ESCO1Q5FWF5 840 aa10.45□□□□□ -0.74
CKAP2-203ENST00000378037 PPP6R1Q9UPN7 881 aa10.45□□□□□ -0.74
CKAP2-203ENST00000378037 TNNQ9UQP3 1299 aa10.45□□□□□ -0.74
CKAP2-203ENST00000378037 PRKAR2BP31323 418 aa10.44□□□□□ -0.74
CKAP2-203ENST00000378037 COG3Q96JB2 828 aa10.44□□□□□ -0.74
CKAP2-203ENST00000378037 PRAG1Q86YV5 1406 aa10.44□□□□□ -0.74
CKAP2-203ENST00000378037 DMRT2Q9Y5R5 561 aa10.44□□□□□ -0.74
CKAP2-203ENST00000378037 YEATS2Q9ULM3 1422 aa10.44□□□□□ -0.74
CKAP2-203ENST00000378037 DHX29Q7Z478 1369 aaKnown RBP10.43□□□□□ -0.74
CKAP2-203ENST00000378037 KAT6BQ8WYB5 2073 aa10.43□□□□□ -0.74
CKAP2-203ENST00000378037 NSD3Q9BZ95 1437 aa10.43□□□□□ -0.74
CKAP2-203ENST00000378037 EIF2S2P20042 333 aaKnown RBP10.43□□□□□ -0.74
CKAP2-203ENST00000378037 SPINK5Q9NQ38 1064 aaPredicted RBP10.43□□□□□ -0.74
CKAP2-203ENST00000378037 CLTCQ00610 1675 aaKnown RBP10.43□□□□□ -0.74
CKAP2-203ENST00000378037 FOXO3O43524 673 aa10.43□□□□□ -0.74
CKAP2-203ENST00000378037 PLA2R1Q13018 1463 aa10.42□□□□□ -0.74
CKAP2-203ENST00000378037 FAM83GA6ND36 823 aa10.42□□□□□ -0.74
CKAP2-203ENST00000378037 DIAPH1O60610 1272 aaKnown RBP10.42□□□□□ -0.74
CKAP2-203ENST00000378037 HDGFP51858 240 aaKnown RBP10.42□□□□□ -0.74
CKAP2-203ENST00000378037 EFCAB6Q5THR3 1501 aa10.42□□□□□ -0.74
CKAP2-203ENST00000378037 HSP90AA1P07900 732 aaKnown RBP10.41□□□□□ -0.74
CKAP2-203ENST00000378037 UBR1Q8IWV7 1749 aa10.41□□□□□ -0.74
CKAP2-203ENST00000378037 ZC3H6P61129 1189 aaKnown RBP10.41□□□□□ -0.74
CKAP2-203ENST00000378037 A2MP01023 1474 aa10.41□□□□□ -0.74
CKAP2-203ENST00000378037 PSME1Q06323 249 aa10.41□□□□□ -0.74
CKAP2-203ENST00000378037 SULT6B1Q6IMI4 303 aa10.41□□□□□ -0.74
CKAP2-203ENST00000378037 ABTB2Q8N961 1025 aa10.41□□□□□ -0.74
CKAP2-203ENST00000378037 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
CKAP2-203ENST00000378037 FOXD4L1Q9NU39 408 aa10.4□□□□□ -0.74
CKAP2-203ENST00000378037 EXOSC9Q06265 439 aaKnown RBP10.4□□□□□ -0.74
CKAP2-203ENST00000378037 RTF1Q92541 710 aaKnown RBP10.4□□□□□ -0.74
CKAP2-203ENST00000378037 SYNMO15061 1565 aa10.4□□□□□ -0.74
CKAP2-203ENST00000378037 DDX17Q92841 729 aaKnown RBP10.4□□□□□ -0.75
CKAP2-203ENST00000378037 NUDT16Q96DE0 195 aaKnown RBP10.39□□□□□ -0.75
CKAP2-203ENST00000378037 NWD1Q149M9 1564 aa10.39□□□□□ -0.75
CKAP2-203ENST00000378037 SETD1AO15047 1707 aaKnown RBP10.38□□□□□ -0.75
CKAP2-203ENST00000378037 CEP152O94986 1710 aa10.38□□□□□ -0.75
CKAP2-203ENST00000378037 MCM10Q7L590 875 aa10.38□□□□□ -0.75
CKAP2-203ENST00000378037 SLC52A1Q9NWF4 448 aa10.38□□□□□ -0.75
CKAP2-203ENST00000378037 ABCC3O15438 1527 aa10.38□□□□□ -0.75
CKAP2-203ENST00000378037 PER1O15534 1290 aaPredicted RBP10.38□□□□□ -0.75
CKAP2-203ENST00000378037 AMER1Q5JTC6 1135 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms