RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 PRAM1Q96QH2 718 aa31.87■■■□□ 2.69
SRM-201ENST00000376957 NEUROD1Q13562 356 aa31.86■■■□□ 2.69
SRM-201ENST00000376957 DLC1Q96QB1 1528 aa31.85■■■□□ 2.69
SRM-201ENST00000376957 TRAK1Q9UPV9 953 aa31.85■■■□□ 2.69
SRM-201ENST00000376957 COL16A1Q07092 1604 aaPredicted RBP31.85■■■□□ 2.69
SRM-201ENST00000376957 LRRC59Q96AG4 307 aaKnown RBP31.84■■■□□ 2.69
SRM-201ENST00000376957 ADGRB1O14514 1584 aa31.84■■■□□ 2.69
SRM-201ENST00000376957 PLEKHH1Q9ULM0 1364 aa31.83■■■□□ 2.69
SRM-201ENST00000376957 ESCO1Q5FWF5 840 aa31.82■■■□□ 2.68
SRM-201ENST00000376957 SPATA31A6Q5VVP1 1343 aa31.81■■■□□ 2.68
SRM-201ENST00000376957 SIN3AQ96ST3 1273 aa31.81■■■□□ 2.68
SRM-201ENST00000376957 SAFB2Q14151 953 aaKnown RBP eCLIP31.8■■■□□ 2.68
SRM-201ENST00000376957 ORAI2Q96SN7 254 aa31.8■■■□□ 2.68
SRM-201ENST00000376957 NHSL1Q5SYE7 1610 aa31.79■■■□□ 2.68
SRM-201ENST00000376957 KIAA1210Q9ULL0 1709 aa31.78■■■□□ 2.68
SRM-201ENST00000376957 L3MBTL2Q969R5 705 aa31.78■■■□□ 2.68
SRM-201ENST00000376957 NPHP3Q7Z494 1330 aa31.75■■■□□ 2.67
SRM-201ENST00000376957 NUTM2FA1L443 756 aa31.75■■■□□ 2.67
SRM-201ENST00000376957 EIF3AQ14152 1382 aaKnown RBP31.72■■■□□ 2.67
SRM-201ENST00000376957 SHPRHQ149N8 1683 aa31.72■■■□□ 2.67
SRM-201ENST00000376957 FMN2Q9NZ56 1722 aa31.72■■■□□ 2.67
SRM-201ENST00000376957 MEX3CQ5U5Q3 659 aaKnown RBP31.71■■■□□ 2.67
SRM-201ENST00000376957 DDX17Q92841 729 aaKnown RBP31.71■■■□□ 2.67
SRM-201ENST00000376957 SOS2Q07890 1332 aaPredicted RBP31.68■■■□□ 2.66
SRM-201ENST00000376957 MINK1Q8N4C8 1332 aaPredicted RBP31.68■■■□□ 2.66
SRM-201ENST00000376957 FOXO3O43524 673 aa31.67■■■□□ 2.66
SRM-201ENST00000376957 TONSLQ96HA7 1378 aa31.67■■■□□ 2.66
SRM-201ENST00000376957 ADGRB2O60241 1585 aa31.64■■■□□ 2.66
SRM-201ENST00000376957 KIF1AQ12756 1690 aa31.64■■■□□ 2.66
SRM-201ENST00000376957 ILDR2Q71H61 639 aa31.64■■■□□ 2.66
SRM-201ENST00000376957 HIRIP3Q9BW71 556 aaPredicted RBP31.64■■■□□ 2.66
SRM-201ENST00000376957 NUTM2BA6NNL0 878 aaPredicted RBP31.63■■■□□ 2.65
SRM-201ENST00000376957 NUTM2EB1AL46 878 aaPredicted RBP31.63■■■□□ 2.65
SRM-201ENST00000376957 NBPF1Q3BBV0 1214 aa31.63■■■□□ 2.65
SRM-201ENST00000376957 NUTM2AQ8IVF1 878 aaPredicted RBP31.63■■■□□ 2.65
SRM-201ENST00000376957 ANKARQ7Z5J8 1434 aa31.63■■■□□ 2.65
SRM-201ENST00000376957 ARHGEF28Q8N1W1 1705 aaKnown RBP31.63■■■□□ 2.65
SRM-201ENST00000376957 WASLO00401 505 aaPredicted RBP31.62■■■□□ 2.65
SRM-201ENST00000376957 PHF8Q9UPP1 1060 aa31.62■■■□□ 2.65
SRM-201ENST00000376957 PSME1Q06323 249 aa31.6■■■□□ 2.65
SRM-201ENST00000376957 PNPLA6Q8IY17 1366 aa31.59■■■□□ 2.65
SRM-201ENST00000376957 ROCK2O75116 1388 aaKnown RBP31.56■■■□□ 2.64
SRM-201ENST00000376957 PCGF6Q9BYE7 350 aa31.56■■■□□ 2.64
SRM-201ENST00000376957 RGPD8O14715 1765 aaPredicted RBP31.55■■■□□ 2.64
SRM-201ENST00000376957 CENPJQ9HC77 1338 aaPredicted RBP31.54■■■□□ 2.64
SRM-201ENST00000376957 XPCQ01831 940 aaPredicted RBP31.54■■■□□ 2.64
SRM-201ENST00000376957 ZNF772Q68DY9 489 aaPredicted RBP31.54■■■□□ 2.64
SRM-201ENST00000376957 KRT28Q7Z3Y7 464 aa31.54■■■□□ 2.64
SRM-201ENST00000376957 TULP4Q9NRJ4 1543 aa31.54■■■□□ 2.64
SRM-201ENST00000376957 PXDNQ92626 1479 aa31.52■■■□□ 2.64
SRM-201ENST00000376957 LRP6O75581 1613 aa31.52■■■□□ 2.64
SRM-201ENST00000376957 TRPM1Q7Z4N2 1603 aa31.52■■■□□ 2.64
SRM-201ENST00000376957 RGS17Q9UGC6 210 aaPredicted RBP31.5■■■□□ 2.63
SRM-201ENST00000376957 PMFBP1Q8TBY8 1022 aa31.49■■■□□ 2.63
SRM-201ENST00000376957 CDK19Q9BWU1 502 aa31.49■■■□□ 2.63
SRM-201ENST00000376957 GPRASP1Q5JY77 1395 aa31.48■■■□□ 2.63
SRM-201ENST00000376957 SOCS7O14512 581 aa31.47■■■□□ 2.63
SRM-201ENST00000376957 NGDNQ8NEJ9 315 aaKnown RBP31.46■■■□□ 2.63
SRM-201ENST00000376957 NUDT16Q96DE0 195 aaKnown RBP31.46■■■□□ 2.63
SRM-201ENST00000376957 SPATA31A3Q5VYP0 1347 aa31.46■■■□□ 2.63
SRM-201ENST00000376957 USP32Q8NFA0 1604 aa31.46■■■□□ 2.63
SRM-201ENST00000376957 ITSN1Q15811 1721 aa31.44■■■□□ 2.62
SRM-201ENST00000376957 C8orf37Q96NL8 207 aa31.44■■■□□ 2.62
SRM-201ENST00000376957 COL22A1Q8NFW1 1626 aaPredicted RBP31.44■■■□□ 2.62
SRM-201ENST00000376957 CLSPNQ9HAW4 1339 aa31.44■■■□□ 2.62
SRM-201ENST00000376957 ADAMTS2O95450 1211 aa31.43■■■□□ 2.62
SRM-201ENST00000376957 SRPK2P78362 688 aaKnown RBP31.43■■■□□ 2.62
SRM-201ENST00000376957 SBNO1A3KN83 1393 aa31.43■■■□□ 2.62
SRM-201ENST00000376957 NBPF8Q3BBV2 869 aa31.42■■■□□ 2.62
SRM-201ENST00000376957 LMOD2Q6P5Q4 547 aa31.42■■■□□ 2.62
SRM-201ENST00000376957 NGLY1Q96IV0 654 aa31.42■■■□□ 2.62
SRM-201ENST00000376957 CCDC61Q9Y6R9 512 aa31.42■■■□□ 2.62
SRM-201ENST00000376957 PRR36Q9H6K5 1346 aa31.42■■■□□ 2.62
SRM-201ENST00000376957 HAP1P54257 671 aaPredicted RBP31.41■■■□□ 2.62
SRM-201ENST00000376957 CARD11Q9BXL7 1154 aa31.41■■■□□ 2.62
SRM-201ENST00000376957 ARHGEF10O15013 1369 aa31.41■■■□□ 2.62
SRM-201ENST00000376957 QRICH2Q9H0J4 1663 aa31.39■■■□□ 2.62
SRM-201ENST00000376957 POTEAQ6S8J7 498 aa31.39■■■□□ 2.62
SRM-201ENST00000376957 TNS3Q68CZ2 1445 aa31.39■■■□□ 2.62
SRM-201ENST00000376957 AFF2P51816 1311 aa31.38■■■□□ 2.61
SRM-201ENST00000376957 EVC2Q86UK5 1308 aa31.38■■■□□ 2.61
SRM-201ENST00000376957 ATP7BP35670 1465 aa31.37■■■□□ 2.61
SRM-201ENST00000376957 TIMELESSQ9UNS1 1208 aa31.36■■■□□ 2.61
SRM-201ENST00000376957 PAK3O75914 559 aaPredicted RBP31.33■■■□□ 2.61
SRM-201ENST00000376957 RALGAPBQ86X10 1494 aa31.33■■■□□ 2.61
SRM-201ENST00000376957 PLEKHG3A1L390 1219 aa31.3■■■□□ 2.6
SRM-201ENST00000376957 RXRBP28702 533 aa31.3■■■□□ 2.6
SRM-201ENST00000376957 CABP2Q9NPB3 220 aa31.3■■■□□ 2.6
SRM-201ENST00000376957 CCER1Q8TC90 406 aaPredicted RBP31.28■■■□□ 2.6
SRM-201ENST00000376957 USP21Q9UK80 565 aa31.28■■■□□ 2.6
SRM-201ENST00000376957 QTRT2Q9H974 415 aaKnown RBP31.27■■■□□ 2.6
SRM-201ENST00000376957 ACEP12821 1306 aa31.26■■■□□ 2.6
SRM-201ENST00000376957 SLC24A1O60721 1099 aa31.26■■■□□ 2.59
SRM-201ENST00000376957 TOPAZ1Q8N9V7 1692 aa31.25■■■□□ 2.59
SRM-201ENST00000376957 PPIP5K1Q6PFW1 1433 aa31.25■■■□□ 2.59
SRM-201ENST00000376957 FNBP4Q8N3X1 1017 aaPredicted RBP31.25■■■□□ 2.59
SRM-201ENST00000376957 POLR3AO14802 1390 aaPredicted RBP31.25■■■□□ 2.59
SRM-201ENST00000376957 MARF1Q9Y4F3 1742 aaKnown RBP31.24■■■□□ 2.59
SRM-201ENST00000376957 PLEKHG5O94827 1062 aa31.24■■■□□ 2.59
SRM-201ENST00000376957 SBNO2Q9Y2G9 1366 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms