RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 FAM135AQ9P2D6 1515 aa18.43■□□□□ 0.54
UBQLN1-202ENST00000376395 TMEM57Q8N5G2 664 aa18.43■□□□□ 0.54
UBQLN1-202ENST00000376395 PRKAR2BP31323 418 aa18.42■□□□□ 0.54
UBQLN1-202ENST00000376395 UHRF1BP1Q6BDS2 1440 aa18.42■□□□□ 0.54
UBQLN1-202ENST00000376395 KDM2BQ8NHM5 1336 aa18.42■□□□□ 0.54
UBQLN1-202ENST00000376395 DDX11L8A8MPP1 907 aa18.42■□□□□ 0.54
UBQLN1-202ENST00000376395 ADAMTS12P58397 1594 aa18.41■□□□□ 0.54
UBQLN1-202ENST00000376395 MCM4P33991 863 aa18.41■□□□□ 0.54
UBQLN1-202ENST00000376395 PRKCSHP14314 528 aaPredicted RBP18.41■□□□□ 0.54
UBQLN1-202ENST00000376395 ATF7IPQ6VMQ6 1270 aa18.41■□□□□ 0.54
UBQLN1-202ENST00000376395 NECTIN2Q92692 538 aa18.41■□□□□ 0.54
UBQLN1-202ENST00000376395 CALD1Q05682 793 aaKnown RBP18.4■□□□□ 0.54
UBQLN1-202ENST00000376395 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
UBQLN1-202ENST00000376395 BCORL1Q5H9F3 1711 aa18.4■□□□□ 0.54
UBQLN1-202ENST00000376395 WDR63Q8IWG1 891 aa18.39■□□□□ 0.54
UBQLN1-202ENST00000376395 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
UBQLN1-202ENST00000376395 A2MP01023 1474 aa18.39■□□□□ 0.53
UBQLN1-202ENST00000376395 OS9Q13438 667 aaPredicted RBP18.39■□□□□ 0.53
UBQLN1-202ENST00000376395 PRAM1Q96QH2 718 aa18.39■□□□□ 0.53
UBQLN1-202ENST00000376395 TRIM6-TRIM34B2RNG4 842 aa18.38■□□□□ 0.53
UBQLN1-202ENST00000376395 TMPOP42166 694 aaKnown RBP18.38■□□□□ 0.53
UBQLN1-202ENST00000376395 TRIM27P14373 513 aa18.38■□□□□ 0.53
UBQLN1-202ENST00000376395 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
UBQLN1-202ENST00000376395 SYCP2Q9BX26 1530 aa18.37■□□□□ 0.53
UBQLN1-202ENST00000376395 CABP1Q9NZU7 370 aa18.37■□□□□ 0.53
UBQLN1-202ENST00000376395 RAPGEF3O95398 923 aa18.36■□□□□ 0.53
UBQLN1-202ENST00000376395 PANK2Q9BZ23 570 aa18.36■□□□□ 0.53
UBQLN1-202ENST00000376395 KIF16BQ96L93 1317 aa18.35■□□□□ 0.53
UBQLN1-202ENST00000376395 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
UBQLN1-202ENST00000376395 COL17A1Q9UMD9 1497 aaPredicted RBP18.35■□□□□ 0.53
UBQLN1-202ENST00000376395 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
UBQLN1-202ENST00000376395 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
UBQLN1-202ENST00000376395 KCNJ4P48050 445 aa18.34■□□□□ 0.53
UBQLN1-202ENST00000376395 TAOK2Q9UL54 1235 aa18.34■□□□□ 0.53
UBQLN1-202ENST00000376395 KDM5CP41229 1560 aa18.34■□□□□ 0.53
UBQLN1-202ENST00000376395 FAM43AQ8N2R8 423 aa18.34■□□□□ 0.53
UBQLN1-202ENST00000376395 LTV1Q96GA3 475 aaPredicted RBP18.34■□□□□ 0.53
UBQLN1-202ENST00000376395 HSP90AA2PQ14568 343 aaPredicted RBP18.33■□□□□ 0.53
UBQLN1-202ENST00000376395 RILPL2Q969X0 211 aa18.33■□□□□ 0.53
UBQLN1-202ENST00000376395 TBC1D32Q96NH3 1257 aa18.33■□□□□ 0.52
UBQLN1-202ENST00000376395 MCCP23508 829 aa18.32■□□□□ 0.52
UBQLN1-202ENST00000376395 ARHGEF12Q9NZN5 1544 aa18.32■□□□□ 0.52
UBQLN1-202ENST00000376395 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
UBQLN1-202ENST00000376395 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
UBQLN1-202ENST00000376395 GPRASP1Q5JY77 1395 aa18.31■□□□□ 0.52
UBQLN1-202ENST00000376395 HAP1P54257 671 aaPredicted RBP18.31■□□□□ 0.52
UBQLN1-202ENST00000376395 CHD1LQ86WJ1 897 aa18.31■□□□□ 0.52
UBQLN1-202ENST00000376395 ADGRL2O95490 1459 aa18.3■□□□□ 0.52
UBQLN1-202ENST00000376395 MRE11P49959 708 aa18.3■□□□□ 0.52
UBQLN1-202ENST00000376395 LRRIQ1Q96JM4 1722 aa18.3■□□□□ 0.52
UBQLN1-202ENST00000376395 ITSN2Q9NZM3 1697 aa18.3■□□□□ 0.52
UBQLN1-202ENST00000376395 TRAPPC8Q9Y2L5 1435 aa18.29■□□□□ 0.52
UBQLN1-202ENST00000376395 COG3Q96JB2 828 aa18.29■□□□□ 0.52
UBQLN1-202ENST00000376395 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
UBQLN1-202ENST00000376395 ST18O60284 1047 aa18.28■□□□□ 0.52
UBQLN1-202ENST00000376395 AAMPQ13685 434 aa18.28■□□□□ 0.52
UBQLN1-202ENST00000376395 TWISTNBQ3B726 338 aaPredicted RBP18.28■□□□□ 0.52
UBQLN1-202ENST00000376395 MPNDQ8N594 471 aa18.28■□□□□ 0.52
UBQLN1-202ENST00000376395 RRS1Q15050 365 aaKnown RBP18.28■□□□□ 0.52
UBQLN1-202ENST00000376395 RNF214Q8ND24 703 aa18.28■□□□□ 0.52
UBQLN1-202ENST00000376395 ASXL1Q8IXJ9 1541 aa18.28■□□□□ 0.52
UBQLN1-202ENST00000376395 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.52
UBQLN1-202ENST00000376395 GRPEL1Q9HAV7 217 aa18.27■□□□□ 0.52
UBQLN1-202ENST00000376395 NOS1P29475 1434 aa18.27■□□□□ 0.52
UBQLN1-202ENST00000376395 PTMSP20962 102 aa18.27■□□□□ 0.52
UBQLN1-202ENST00000376395 CFAP44Q96MT7 982 aa18.27■□□□□ 0.51
UBQLN1-202ENST00000376395 CDK19Q9BWU1 502 aa18.27■□□□□ 0.51
UBQLN1-202ENST00000376395 STK31Q9BXU1 1019 aa18.27■□□□□ 0.51
UBQLN1-202ENST00000376395 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.51
UBQLN1-202ENST00000376395 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
UBQLN1-202ENST00000376395 HMMRO75330 724 aa18.25■□□□□ 0.51
UBQLN1-202ENST00000376395 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
UBQLN1-202ENST00000376395 MBD5Q9P267 1494 aa18.25■□□□□ 0.51
UBQLN1-202ENST00000376395 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.51
UBQLN1-202ENST00000376395 GNAI1P63096 354 aa18.25■□□□□ 0.51
UBQLN1-202ENST00000376395 LMOD3Q0VAK6 560 aa18.25■□□□□ 0.51
UBQLN1-202ENST00000376395 WAPLQ7Z5K2 1190 aa18.25■□□□□ 0.51
UBQLN1-202ENST00000376395 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
UBQLN1-202ENST00000376395 ZMYM4Q5VZL5 1548 aa18.25■□□□□ 0.51
UBQLN1-202ENST00000376395 NASPP49321 788 aaPredicted RBP18.24■□□□□ 0.51
UBQLN1-202ENST00000376395 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
UBQLN1-202ENST00000376395 CDC45O75419 566 aa18.23■□□□□ 0.51
UBQLN1-202ENST00000376395 NINLQ9Y2I6 1382 aa18.23■□□□□ 0.51
UBQLN1-202ENST00000376395 SKOR2Q2VWA4 1001 aaPredicted RBP18.23■□□□□ 0.51
UBQLN1-202ENST00000376395 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
UBQLN1-202ENST00000376395 FGD1P98174 961 aa18.22■□□□□ 0.51
UBQLN1-202ENST00000376395 KIAA1211Q6ZU35 1233 aa18.22■□□□□ 0.51
UBQLN1-202ENST00000376395 ZNF428Q96B54 188 aa18.22■□□□□ 0.51
UBQLN1-202ENST00000376395 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
UBQLN1-202ENST00000376395 NAP1L2Q9ULW6 460 aaPredicted RBP18.22■□□□□ 0.51
UBQLN1-202ENST00000376395 PRPF40AO75400 957 aaKnown RBP18.22■□□□□ 0.51
UBQLN1-202ENST00000376395 TNPO1Q92973 898 aaKnown RBP18.22■□□□□ 0.51
UBQLN1-202ENST00000376395 SMARCA5O60264 1052 aaPredicted RBP18.22■□□□□ 0.51
UBQLN1-202ENST00000376395 GOLGA6L4A6NEF3 574 aa18.21■□□□□ 0.51
UBQLN1-202ENST00000376395 EMILIN1Q9Y6C2 1016 aa18.21■□□□□ 0.51
UBQLN1-202ENST00000376395 FAM83GA6ND36 823 aa18.21■□□□□ 0.5
UBQLN1-202ENST00000376395 SSFA2P28290 1259 aa18.21■□□□□ 0.5
UBQLN1-202ENST00000376395 TXNDC2Q86VQ3 553 aa18.21■□□□□ 0.5
UBQLN1-202ENST00000376395 AMPHP49418 695 aa18.2■□□□□ 0.5
UBQLN1-202ENST00000376395 IDI1Q13907 227 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms