RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TRPC5Q9UL62 973 aaPredicted RBP18.25■□□□□ 0.51
LSM2-208ENST00000375661 USP21Q9UK80 565 aa18.24■□□□□ 0.51
LSM2-208ENST00000375661 FNBP4Q8N3X1 1017 aaPredicted RBP18.23■□□□□ 0.51
LSM2-208ENST00000375661 ATRNO75882 1429 aa18.22■□□□□ 0.51
LSM2-208ENST00000375661 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
LSM2-208ENST00000375661 MYOM2P54296 1465 aa18.2■□□□□ 0.5
LSM2-208ENST00000375661 FOXD1Q16676 465 aa18.2■□□□□ 0.5
LSM2-208ENST00000375661 KNDC1Q76NI1 1749 aa18.19■□□□□ 0.5
LSM2-208ENST00000375661 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.19■□□□□ 0.5
LSM2-208ENST00000375661 PXDNQ92626 1479 aa18.19■□□□□ 0.5
LSM2-208ENST00000375661 IFT172Q9UG01 1749 aa18.18■□□□□ 0.5
LSM2-208ENST00000375661 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
LSM2-208ENST00000375661 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
LSM2-208ENST00000375661 TECPR2O15040 1411 aa18.17■□□□□ 0.5
LSM2-208ENST00000375661 ESCO1Q5FWF5 840 aa18.16■□□□□ 0.5
LSM2-208ENST00000375661 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
LSM2-208ENST00000375661 CCDC125Q86Z20 511 aa18.15■□□□□ 0.5
LSM2-208ENST00000375661 BCL9LQ86UU0 1499 aa18.14■□□□□ 0.5
LSM2-208ENST00000375661 FMN2Q9NZ56 1722 aa18.14■□□□□ 0.49
LSM2-208ENST00000375661 ANKRD30BQ9BXX2 1392 aa18.13■□□□□ 0.49
LSM2-208ENST00000375661 CCDC144AA2RUR9 1427 aa18.12■□□□□ 0.49
LSM2-208ENST00000375661 FOXO3O43524 673 aa18.11■□□□□ 0.49
LSM2-208ENST00000375661 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
LSM2-208ENST00000375661 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
LSM2-208ENST00000375661 ADGRF5Q8IZF2 1346 aa18.1■□□□□ 0.49
LSM2-208ENST00000375661 GJD4Q96KN9 370 aaPredicted RBP18.1■□□□□ 0.49
LSM2-208ENST00000375661 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
LSM2-208ENST00000375661 USP32Q8NFA0 1604 aa18.08■□□□□ 0.48
LSM2-208ENST00000375661 SLIT2O94813 1529 aa18.08■□□□□ 0.48
LSM2-208ENST00000375661 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
LSM2-208ENST00000375661 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
LSM2-208ENST00000375661 PIK3C2GO75747 1445 aa18.06■□□□□ 0.48
LSM2-208ENST00000375661 SPATA31A3Q5VYP0 1347 aa18.06■□□□□ 0.48
LSM2-208ENST00000375661 GLI3P10071 1580 aa18.06■□□□□ 0.48
LSM2-208ENST00000375661 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
LSM2-208ENST00000375661 UNC5CLQ8IV45 518 aa18.06■□□□□ 0.48
LSM2-208ENST00000375661 SIRT1Q96EB6 747 aa18.06■□□□□ 0.48
LSM2-208ENST00000375661 STK26Q9P289 416 aa18.06■□□□□ 0.48
LSM2-208ENST00000375661 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
LSM2-208ENST00000375661 NWD2Q9ULI1 1742 aa18.05■□□□□ 0.48
LSM2-208ENST00000375661 YTHDC2Q9H6S0 1430 aaKnown RBP18.05■□□□□ 0.48
LSM2-208ENST00000375661 RALGAPBQ86X10 1494 aa18.04■□□□□ 0.48
LSM2-208ENST00000375661 EP400Q96L91 3159 aa18.03■□□□□ 0.48
LSM2-208ENST00000375661 RGL3Q3MIN7 710 aa18.03■□□□□ 0.48
LSM2-208ENST00000375661 BLMP54132 1417 aaPredicted RBP18.03■□□□□ 0.48
LSM2-208ENST00000375661 PLEKHH1Q9ULM0 1364 aa18.03■□□□□ 0.48
LSM2-208ENST00000375661 PLCH1Q4KWH8 1693 aa18.03■□□□□ 0.48
LSM2-208ENST00000375661 NUTM2FA1L443 756 aa18.02■□□□□ 0.48
LSM2-208ENST00000375661 ABCA3Q99758 1704 aa18.02■□□□□ 0.48
LSM2-208ENST00000375661 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
LSM2-208ENST00000375661 KRT28Q7Z3Y7 464 aa18.01■□□□□ 0.47
LSM2-208ENST00000375661 ACIN1Q9UKV3 1341 aaKnown RBP18■□□□□ 0.47
LSM2-208ENST00000375661 TNS3Q68CZ2 1445 aa18■□□□□ 0.47
LSM2-208ENST00000375661 PSME1Q06323 249 aa18■□□□□ 0.47
LSM2-208ENST00000375661 MPHOSPH9Q99550 1183 aa18■□□□□ 0.47
LSM2-208ENST00000375661 SBNO1A3KN83 1393 aa17.99■□□□□ 0.47
LSM2-208ENST00000375661 NRXN1Q9ULB1 1477 aa17.99■□□□□ 0.47
LSM2-208ENST00000375661 C14orf93Q9H972 538 aaKnown RBP17.98■□□□□ 0.47
LSM2-208ENST00000375661 ARHGEF10O15013 1369 aa17.97■□□□□ 0.47
LSM2-208ENST00000375661 DHX57Q6P158 1386 aaKnown RBP17.97■□□□□ 0.47
LSM2-208ENST00000375661 TRIM26Q12899 539 aaPredicted RBP17.97■□□□□ 0.47
LSM2-208ENST00000375661 VPS72Q15906 364 aa17.97■□□□□ 0.47
LSM2-208ENST00000375661 PHF8Q9UPP1 1060 aa17.97■□□□□ 0.47
LSM2-208ENST00000375661 HAP1P54257 671 aaPredicted RBP17.96■□□□□ 0.47
LSM2-208ENST00000375661 DLC1Q96QB1 1528 aa17.95■□□□□ 0.46
LSM2-208ENST00000375661 ONECUT3O60422 494 aaPredicted RBP17.95■□□□□ 0.46
LSM2-208ENST00000375661 SF3B2Q13435 895 aaKnown RBP17.95■□□□□ 0.46
LSM2-208ENST00000375661 ADGRB2O60241 1585 aa17.95■□□□□ 0.46
LSM2-208ENST00000375661 SEPT12Q8IYM1 358 aa17.94■□□□□ 0.46
LSM2-208ENST00000375661 ANKARQ7Z5J8 1434 aa17.94■□□□□ 0.46
LSM2-208ENST00000375661 NRAPQ86VF7 1730 aa17.92■□□□□ 0.46
LSM2-208ENST00000375661 LRP5O75197 1615 aa17.92■□□□□ 0.46
LSM2-208ENST00000375661 TRPM3Q9HCF6 1732 aaPredicted RBP17.92■□□□□ 0.46
LSM2-208ENST00000375661 SRCAPQ6ZRS2 3230 aa17.91■□□□□ 0.46
LSM2-208ENST00000375661 ALS2Q96Q42 1657 aa17.9■□□□□ 0.46
LSM2-208ENST00000375661 CFAP70Q5T0N1 1121 aa17.9■□□□□ 0.46
LSM2-208ENST00000375661 CABLES1Q8TDN4 633 aa17.9■□□□□ 0.46
LSM2-208ENST00000375661 COL14A1Q05707 1796 aaKnown RBP17.89■□□□□ 0.45
LSM2-208ENST00000375661 KRT27Q7Z3Y8 459 aa17.89■□□□□ 0.45
LSM2-208ENST00000375661 DEFB132Q7Z7B7 95 aa17.89■□□□□ 0.45
LSM2-208ENST00000375661 PRAM1Q96QH2 718 aa17.89■□□□□ 0.45
LSM2-208ENST00000375661 CCDC9Q9Y3X0 531 aaKnown RBP17.88■□□□□ 0.45
LSM2-208ENST00000375661 EIF3AQ14152 1382 aaKnown RBP17.88■□□□□ 0.45
LSM2-208ENST00000375661 RAB3GAP2Q9H2M9 1393 aa17.88■□□□□ 0.45
LSM2-208ENST00000375661 RGPD1P0DJD0 1748 aa17.87■□□□□ 0.45
LSM2-208ENST00000375661 LMOD2Q6P5Q4 547 aa17.87■□□□□ 0.45
LSM2-208ENST00000375661 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
LSM2-208ENST00000375661 FAM83GA6ND36 823 aa17.86■□□□□ 0.45
LSM2-208ENST00000375661 POGKQ9P215 609 aa17.86■□□□□ 0.45
LSM2-208ENST00000375661 CRYBG1Q9Y4K1 1723 aa17.86■□□□□ 0.45
LSM2-208ENST00000375661 SAFB2Q14151 953 aaKnown RBP eCLIP17.85■□□□□ 0.45
LSM2-208ENST00000375661 TULP4Q9NRJ4 1543 aa17.84■□□□□ 0.45
LSM2-208ENST00000375661 GPRASP1Q5JY77 1395 aa17.84■□□□□ 0.45
LSM2-208ENST00000375661 BAG6P46379 1132 aa17.84■□□□□ 0.45
LSM2-208ENST00000375661 PMFBP1Q8TBY8 1022 aa17.84■□□□□ 0.45
LSM2-208ENST00000375661 ITSN1Q15811 1721 aa17.84■□□□□ 0.45
LSM2-208ENST00000375661 HRCP23327 699 aa17.83■□□□□ 0.44
LSM2-208ENST00000375661 THSD7AQ9UPZ6 1657 aa17.81■□□□□ 0.44
LSM2-208ENST00000375661 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
LSM2-208ENST00000375661 BTG4Q9NY30 223 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms