RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RAPGEF6Q8TEU7 1601 aa22.36■■□□□ 1.17
PTPDC1-202ENST00000375360 AIMP1Q12904 312 aaKnown RBP22.36■■□□□ 1.17
PTPDC1-202ENST00000375360 FAM161AQ3B820 660 aa22.36■■□□□ 1.17
PTPDC1-202ENST00000375360 ASXL2Q76L83 1435 aa22.36■■□□□ 1.17
PTPDC1-202ENST00000375360 PTMAP06454 111 aaKnown RBP22.36■■□□□ 1.17
PTPDC1-202ENST00000375360 GZF1Q9H116 711 aaPredicted RBP22.35■■□□□ 1.17
PTPDC1-202ENST00000375360 DENND4BO75064 1496 aaPredicted RBP22.35■■□□□ 1.17
PTPDC1-202ENST00000375360 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
PTPDC1-202ENST00000375360 UGGT2Q9NYU1 1516 aa22.34■■□□□ 1.17
PTPDC1-202ENST00000375360 GOLGA6L4A6NEF3 574 aa22.34■■□□□ 1.17
PTPDC1-202ENST00000375360 NSD3Q9BZ95 1437 aa22.34■■□□□ 1.17
PTPDC1-202ENST00000375360 NEXNQ0ZGT2 675 aa22.34■■□□□ 1.17
PTPDC1-202ENST00000375360 PLCH2O75038 1416 aa22.33■■□□□ 1.17
PTPDC1-202ENST00000375360 KIF16BQ96L93 1317 aa22.33■■□□□ 1.17
PTPDC1-202ENST00000375360 GPATCH3Q96I76 525 aa22.33■■□□□ 1.17
PTPDC1-202ENST00000375360 TRAPPC8Q9Y2L5 1435 aa22.31■■□□□ 1.16
PTPDC1-202ENST00000375360 RTN4Q9NQC3 1192 aaKnown RBP22.3■■□□□ 1.16
PTPDC1-202ENST00000375360 TULP1O00294 542 aaPredicted RBP22.3■■□□□ 1.16
PTPDC1-202ENST00000375360 NOS1P29475 1434 aa22.3■■□□□ 1.16
PTPDC1-202ENST00000375360 POGZQ7Z3K3 1410 aa22.3■■□□□ 1.16
PTPDC1-202ENST00000375360 ATAD2Q6PL18 1390 aa22.3■■□□□ 1.16
PTPDC1-202ENST00000375360 ZNF428Q96B54 188 aa22.3■■□□□ 1.16
PTPDC1-202ENST00000375360 ISY1Q9ULR0 285 aaKnown RBP22.3■■□□□ 1.16
PTPDC1-202ENST00000375360 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
PTPDC1-202ENST00000375360 STRN4Q9NRL3 753 aa22.29■■□□□ 1.16
PTPDC1-202ENST00000375360 THUMPD2Q9BTF0 503 aaKnown RBP22.29■■□□□ 1.16
PTPDC1-202ENST00000375360 TWISTNBQ3B726 338 aaPredicted RBP22.28■■□□□ 1.16
PTPDC1-202ENST00000375360 NME9Q86XW9 330 aa22.28■■□□□ 1.16
PTPDC1-202ENST00000375360 ZC3H6P61129 1189 aaKnown RBP22.27■■□□□ 1.16
PTPDC1-202ENST00000375360 AMOTL2Q9Y2J4 779 aa22.27■■□□□ 1.16
PTPDC1-202ENST00000375360 FRAT2O75474 233 aaPredicted RBP22.26■■□□□ 1.15
PTPDC1-202ENST00000375360 GAS2L2Q8NHY3 880 aa22.26■■□□□ 1.15
PTPDC1-202ENST00000375360 C1orf115Q9H7X2 142 aa22.25■■□□□ 1.15
PTPDC1-202ENST00000375360 C14orf93Q9H972 538 aaKnown RBP22.25■■□□□ 1.15
PTPDC1-202ENST00000375360 FBLN1P23142 703 aa22.25■■□□□ 1.15
PTPDC1-202ENST00000375360 SYCP2Q9BX26 1530 aa22.25■■□□□ 1.15
PTPDC1-202ENST00000375360 FOXD4L5Q5VV16 416 aaPredicted RBP22.24■■□□□ 1.15
PTPDC1-202ENST00000375360 FOXD4L4Q8WXT5 416 aaPredicted RBP22.24■■□□□ 1.15
PTPDC1-202ENST00000375360 KIAA0556O60303 1618 aa22.24■■□□□ 1.15
PTPDC1-202ENST00000375360 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
PTPDC1-202ENST00000375360 MAPKBP1O60336 1514 aa22.24■■□□□ 1.15
PTPDC1-202ENST00000375360 DDX58O95786 925 aaKnown RBP22.23■■□□□ 1.15
PTPDC1-202ENST00000375360 FOXO3O43524 673 aa22.23■■□□□ 1.15
PTPDC1-202ENST00000375360 DISP3Q9P2K9 1392 aa22.22■■□□□ 1.15
PTPDC1-202ENST00000375360 NOB1Q9ULX3 412 aaKnown RBP22.22■■□□□ 1.15
PTPDC1-202ENST00000375360 EMILIN1Q9Y6C2 1016 aa22.22■■□□□ 1.15
PTPDC1-202ENST00000375360 RIC3Q7Z5B4 369 aa22.22■■□□□ 1.15
PTPDC1-202ENST00000375360 WWC1Q8IX03 1113 aa22.22■■□□□ 1.15
PTPDC1-202ENST00000375360 KDM5BQ9UGL1 1544 aa22.21■■□□□ 1.15
PTPDC1-202ENST00000375360 DISP1Q96F81 1524 aa22.21■■□□□ 1.15
PTPDC1-202ENST00000375360 DEKP35659 375 aaKnown RBP22.21■■□□□ 1.15
PTPDC1-202ENST00000375360 SLC4A2P04920 1241 aa22.21■■□□□ 1.15
PTPDC1-202ENST00000375360 DCTN1Q14203 1278 aa22.2■■□□□ 1.14
PTPDC1-202ENST00000375360 PLEKHO1Q53GL0 409 aaPredicted RBP22.2■■□□□ 1.14
PTPDC1-202ENST00000375360 TMPOP42166 694 aaKnown RBP22.19■■□□□ 1.14
PTPDC1-202ENST00000375360 ZNF530Q6P9A1 599 aaPredicted RBP22.19■■□□□ 1.14
PTPDC1-202ENST00000375360 CTTNBP2Q8WZ74 1663 aa22.19■■□□□ 1.14
PTPDC1-202ENST00000375360 TOMM22Q9NS69 142 aa22.19■■□□□ 1.14
PTPDC1-202ENST00000375360 WDR62O43379 1518 aa22.19■■□□□ 1.14
PTPDC1-202ENST00000375360 WASLO00401 505 aaPredicted RBP22.19■■□□□ 1.14
PTPDC1-202ENST00000375360 MIS18AQ9NYP9 233 aa22.19■■□□□ 1.14
PTPDC1-202ENST00000375360 GBP4Q96PP9 640 aa22.18■■□□□ 1.14
PTPDC1-202ENST00000375360 NUP160Q12769 1436 aa22.18■■□□□ 1.14
PTPDC1-202ENST00000375360 DDX54Q8TDD1 881 aaKnown RBP22.18■■□□□ 1.14
PTPDC1-202ENST00000375360 GNL2Q13823 731 aaKnown RBP22.17■■□□□ 1.14
PTPDC1-202ENST00000375360 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
PTPDC1-202ENST00000375360 MSH5O43196 834 aa22.17■■□□□ 1.14
PTPDC1-202ENST00000375360 FCHSD2O94868 740 aa22.17■■□□□ 1.14
PTPDC1-202ENST00000375360 HSP90B1P14625 803 aaKnown RBP22.16■■□□□ 1.14
PTPDC1-202ENST00000375360 FOXD4L6Q3SYB3 417 aaPredicted RBP22.16■■□□□ 1.14
PTPDC1-202ENST00000375360 FOXD4L3Q6VB84 417 aaPredicted RBP22.16■■□□□ 1.14
PTPDC1-202ENST00000375360 IFIT2P09913 472 aaKnown RBP22.16■■□□□ 1.14
PTPDC1-202ENST00000375360 UBTFL1P0CB47 393 aaPredicted RBP22.16■■□□□ 1.14
PTPDC1-202ENST00000375360 HDGFL1Q5TGJ6 251 aa22.16■■□□□ 1.14
PTPDC1-202ENST00000375360 WDR63Q8IWG1 891 aa22.16■■□□□ 1.14
PTPDC1-202ENST00000375360 PRDM11Q9NQV5 511 aa22.16■■□□□ 1.14
PTPDC1-202ENST00000375360 WDR7Q9Y4E6 1490 aa22.16■■□□□ 1.14
PTPDC1-202ENST00000375360 DNTTIP2Q5QJE6 756 aaKnown RBP22.15■■□□□ 1.14
PTPDC1-202ENST00000375360 TOM1L2Q6ZVM7 507 aa22.15■■□□□ 1.14
PTPDC1-202ENST00000375360 ST18O60284 1047 aa22.15■■□□□ 1.14
PTPDC1-202ENST00000375360 G3BP1Q13283 466 aaKnown RBP eCLIP22.15■■□□□ 1.14
PTPDC1-202ENST00000375360 CCDC30Q5VVM6 783 aa22.15■■□□□ 1.14
PTPDC1-202ENST00000375360 DIAPH3Q9NSV4 1193 aa22.14■■□□□ 1.14
PTPDC1-202ENST00000375360 SLFN5Q08AF3 891 aa22.14■■□□□ 1.13
PTPDC1-202ENST00000375360 PDE3AQ14432 1141 aa22.14■■□□□ 1.13
PTPDC1-202ENST00000375360 MCM10Q7L590 875 aa22.13■■□□□ 1.13
PTPDC1-202ENST00000375360 A2MP01023 1474 aa22.13■■□□□ 1.13
PTPDC1-202ENST00000375360 NUTM2BA6NNL0 878 aaPredicted RBP22.13■■□□□ 1.13
PTPDC1-202ENST00000375360 NUTM2EB1AL46 878 aaPredicted RBP22.13■■□□□ 1.13
PTPDC1-202ENST00000375360 TATP17735 454 aaPredicted RBP22.13■■□□□ 1.13
PTPDC1-202ENST00000375360 NUTM2AQ8IVF1 878 aaPredicted RBP22.13■■□□□ 1.13
PTPDC1-202ENST00000375360 SCAF11Q99590 1463 aaKnown RBP22.13■■□□□ 1.13
PTPDC1-202ENST00000375360 ANO2Q9NQ90 1003 aa22.12■■□□□ 1.13
PTPDC1-202ENST00000375360 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
PTPDC1-202ENST00000375360 USHBP1Q8N6Y0 703 aa22.12■■□□□ 1.13
PTPDC1-202ENST00000375360 FAM177BA6PVY3 158 aa22.11■■□□□ 1.13
PTPDC1-202ENST00000375360 TMX4Q9H1E5 349 aaPredicted RBP22.11■■□□□ 1.13
PTPDC1-202ENST00000375360 ATF7IPQ6VMQ6 1270 aa22.11■■□□□ 1.13
PTPDC1-202ENST00000375360 PDZRN3Q9UPQ7 1066 aa22.11■■□□□ 1.13
PTPDC1-202ENST00000375360 SURF6O75683 361 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms