RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 CDC45O75419 566 aa23.91■■□□□ 1.42
TGFBR1-201ENST00000374990 RPRD2Q5VT52 1461 aaKnown RBP23.91■■□□□ 1.42
TGFBR1-201ENST00000374990 PRAM1Q96QH2 718 aa23.91■■□□□ 1.42
TGFBR1-201ENST00000374990 C11orf95C9JLR9 678 aaPredicted RBP23.91■■□□□ 1.42
TGFBR1-201ENST00000374990 ANO2Q9NQ90 1003 aa23.9■■□□□ 1.42
TGFBR1-201ENST00000374990 CAMSAP2Q08AD1 1489 aa23.9■■□□□ 1.42
TGFBR1-201ENST00000374990 TTC5Q8N0Z6 440 aa23.9■■□□□ 1.42
TGFBR1-201ENST00000374990 PSME1Q06323 249 aa23.89■■□□□ 1.41
TGFBR1-201ENST00000374990 FOXD4L5Q5VV16 416 aaPredicted RBP23.89■■□□□ 1.41
TGFBR1-201ENST00000374990 FOXD4L4Q8WXT5 416 aaPredicted RBP23.89■■□□□ 1.41
TGFBR1-201ENST00000374990 IFIT2P09913 472 aaKnown RBP23.89■■□□□ 1.41
TGFBR1-201ENST00000374990 PDZRN3Q9UPQ7 1066 aa23.89■■□□□ 1.41
TGFBR1-201ENST00000374990 ZNF428Q96B54 188 aa23.88■■□□□ 1.41
TGFBR1-201ENST00000374990 SF3A1Q15459 793 aaKnown RBP23.88■■□□□ 1.41
TGFBR1-201ENST00000374990 GNAI3P08754 354 aa23.88■■□□□ 1.41
TGFBR1-201ENST00000374990 BCAR3O75815 825 aa23.87■■□□□ 1.41
TGFBR1-201ENST00000374990 GCC1Q96CN9 775 aa23.87■■□□□ 1.41
TGFBR1-201ENST00000374990 GAS2L2Q8NHY3 880 aa23.87■■□□□ 1.41
TGFBR1-201ENST00000374990 ZNF692Q9BU19 519 aaPredicted RBP23.87■■□□□ 1.41
TGFBR1-201ENST00000374990 ATAD2Q6PL18 1390 aa23.86■■□□□ 1.41
TGFBR1-201ENST00000374990 FAM184AQ8NB25 1140 aa23.86■■□□□ 1.41
TGFBR1-201ENST00000374990 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
TGFBR1-201ENST00000374990 RNF20Q5VTR2 975 aa23.86■■□□□ 1.41
TGFBR1-201ENST00000374990 RSPH6AQ9H0K4 717 aa23.86■■□□□ 1.41
TGFBR1-201ENST00000374990 H3BQV1 296 aa23.85■■□□□ 1.41
TGFBR1-201ENST00000374990 IFFO2Q5TF58 517 aa23.85■■□□□ 1.41
TGFBR1-201ENST00000374990 NLRP6P59044 892 aa23.85■■□□□ 1.41
TGFBR1-201ENST00000374990 ERC2O15083 957 aa23.85■■□□□ 1.41
TGFBR1-201ENST00000374990 G3BP1Q13283 466 aaKnown RBP eCLIP23.85■■□□□ 1.41
TGFBR1-201ENST00000374990 PLB1Q6P1J6 1458 aa23.84■■□□□ 1.41
TGFBR1-201ENST00000374990 TWISTNBQ3B726 338 aaPredicted RBP23.84■■□□□ 1.41
TGFBR1-201ENST00000374990 GRIN2AQ12879 1464 aa23.84■■□□□ 1.41
TGFBR1-201ENST00000374990 SLFN5Q08AF3 891 aa23.83■■□□□ 1.41
TGFBR1-201ENST00000374990 ATF7IPQ6VMQ6 1270 aa23.83■■□□□ 1.41
TGFBR1-201ENST00000374990 CPLX2Q6PUV4 134 aaKnown RBP23.83■■□□□ 1.4
TGFBR1-201ENST00000374990 NECTIN2Q92692 538 aa23.82■■□□□ 1.4
TGFBR1-201ENST00000374990 UBTFL1P0CB47 393 aaPredicted RBP23.81■■□□□ 1.4
TGFBR1-201ENST00000374990 CABP1Q9NZU7 370 aa23.8■■□□□ 1.4
TGFBR1-201ENST00000374990 MVPQ14764 893 aaKnown RBP23.79■■□□□ 1.4
TGFBR1-201ENST00000374990 CCDC30Q5VVM6 783 aa23.79■■□□□ 1.4
TGFBR1-201ENST00000374990 CDK19Q9BWU1 502 aa23.79■■□□□ 1.4
TGFBR1-201ENST00000374990 RAPGEF4Q8WZA2 1011 aa23.79■■□□□ 1.4
TGFBR1-201ENST00000374990 TSR2Q969E8 191 aaKnown RBP23.79■■□□□ 1.4
TGFBR1-201ENST00000374990 ISY1Q9ULR0 285 aaKnown RBP23.78■■□□□ 1.4
TGFBR1-201ENST00000374990 WWC1Q8IX03 1113 aa23.78■■□□□ 1.4
TGFBR1-201ENST00000374990 FCHSD2O94868 740 aa23.77■■□□□ 1.4
TGFBR1-201ENST00000374990 TOMM22Q9NS69 142 aa23.77■■□□□ 1.4
TGFBR1-201ENST00000374990 URB2Q14146 1524 aaKnown RBP23.76■■□□□ 1.39
TGFBR1-201ENST00000374990 GTF2E1P29083 439 aaPredicted RBP23.76■■□□□ 1.39
TGFBR1-201ENST00000374990 NOB1Q9ULX3 412 aaKnown RBP23.76■■□□□ 1.39
TGFBR1-201ENST00000374990 GOLGA6L19H0YKK7 550 aa23.76■■□□□ 1.39
TGFBR1-201ENST00000374990 MCM2P49736 904 aa23.76■■□□□ 1.39
TGFBR1-201ENST00000374990 TXNDC2Q86VQ3 553 aa23.76■■□□□ 1.39
TGFBR1-201ENST00000374990 MRE11P49959 708 aa23.75■■□□□ 1.39
TGFBR1-201ENST00000374990 SMC3Q9UQE7 1217 aa23.75■■□□□ 1.39
TGFBR1-201ENST00000374990 BECN2A8MW95 431 aa23.75■■□□□ 1.39
TGFBR1-201ENST00000374990 TULP1O00294 542 aaPredicted RBP23.75■■□□□ 1.39
TGFBR1-201ENST00000374990 RABEP1Q15276 862 aa23.75■■□□□ 1.39
TGFBR1-201ENST00000374990 FOXD4L6Q3SYB3 417 aaPredicted RBP23.75■■□□□ 1.39
TGFBR1-201ENST00000374990 FOXD4L3Q6VB84 417 aaPredicted RBP23.75■■□□□ 1.39
TGFBR1-201ENST00000374990 CLASRPQ8N2M8 674 aaKnown RBP23.74■■□□□ 1.39
TGFBR1-201ENST00000374990 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
TGFBR1-201ENST00000374990 KIF14Q15058 1648 aa23.73■■□□□ 1.39
TGFBR1-201ENST00000374990 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.73■■□□□ 1.39
TGFBR1-201ENST00000374990 CCDC9Q9Y3X0 531 aaKnown RBP23.73■■□□□ 1.39
TGFBR1-201ENST00000374990 FRAT2O75474 233 aaPredicted RBP23.72■■□□□ 1.39
TGFBR1-201ENST00000374990 NSD3Q9BZ95 1437 aa23.72■■□□□ 1.39
TGFBR1-201ENST00000374990 RTEL1-TNFRSF6BF6WH68 1400 aa23.71■■□□□ 1.39
TGFBR1-201ENST00000374990 RAPGEF3O95398 923 aa23.71■■□□□ 1.39
TGFBR1-201ENST00000374990 SULT6B1Q6IMI4 303 aa23.71■■□□□ 1.39
TGFBR1-201ENST00000374990 EVA1CP58658 441 aa23.7■■□□□ 1.38
TGFBR1-201ENST00000374990 SYNE3Q6ZMZ3 975 aa23.7■■□□□ 1.38
TGFBR1-201ENST00000374990 TMX4Q9H1E5 349 aaPredicted RBP23.69■■□□□ 1.38
TGFBR1-201ENST00000374990 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
TGFBR1-201ENST00000374990 SURF6O75683 361 aaKnown RBP23.69■■□□□ 1.38
TGFBR1-201ENST00000374990 GNAI2P04899 355 aa23.69■■□□□ 1.38
TGFBR1-201ENST00000374990 TRAK2O60296 914 aa23.69■■□□□ 1.38
TGFBR1-201ENST00000374990 CCT4P50991 539 aaKnown RBP23.69■■□□□ 1.38
TGFBR1-201ENST00000374990 TMPOP42166 694 aaKnown RBP23.68■■□□□ 1.38
TGFBR1-201ENST00000374990 ABTB2Q8N961 1025 aa23.68■■□□□ 1.38
TGFBR1-201ENST00000374990 CCDC61Q9Y6R9 512 aa23.68■■□□□ 1.38
TGFBR1-201ENST00000374990 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
TGFBR1-201ENST00000374990 RASSF8Q8NHQ8 419 aa23.68■■□□□ 1.38
TGFBR1-201ENST00000374990 MCTP1Q6DN14 999 aa23.67■■□□□ 1.38
TGFBR1-201ENST00000374990 CNTROBQ8N137 903 aa23.67■■□□□ 1.38
TGFBR1-201ENST00000374990 CPLX1O14810 134 aa23.67■■□□□ 1.38
TGFBR1-201ENST00000374990 MBD3O95983 291 aa23.67■■□□□ 1.38
TGFBR1-201ENST00000374990 THEMISQ8N1K5 641 aaPredicted RBP23.66■■□□□ 1.38
TGFBR1-201ENST00000374990 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
TGFBR1-201ENST00000374990 VPS37CA5D8V6 355 aaPredicted RBP23.66■■□□□ 1.38
TGFBR1-201ENST00000374990 PLEKHO1Q53GL0 409 aaPredicted RBP23.66■■□□□ 1.38
TGFBR1-201ENST00000374990 MAPKBP1O60336 1514 aa23.66■■□□□ 1.38
TGFBR1-201ENST00000374990 AKAP17AQ02040 695 aaKnown RBP23.66■■□□□ 1.38
TGFBR1-201ENST00000374990 TRDNQ13061 729 aa23.66■■□□□ 1.38
TGFBR1-201ENST00000374990 SLC4A2P04920 1241 aa23.66■■□□□ 1.38
TGFBR1-201ENST00000374990 NLRP2Q9NX02 1062 aa23.65■■□□□ 1.38
TGFBR1-201ENST00000374990 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.65■■□□□ 1.38
TGFBR1-201ENST00000374990 HSP90AA2PQ14568 343 aaPredicted RBP23.64■■□□□ 1.38
TGFBR1-201ENST00000374990 NFE2L2Q16236 605 aa23.64■■□□□ 1.38
TGFBR1-201ENST00000374990 NEK4P51957 841 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms