RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 PRAM1Q96QH2 718 aa30.15■■■□□ 2.42
MAP1LC3A-202ENST00000374837 CLSPNQ9HAW4 1339 aa30.13■■■□□ 2.41
MAP1LC3A-202ENST00000374837 POGKQ9P215 609 aa30.12■■■□□ 2.41
MAP1LC3A-202ENST00000374837 KNDC1Q76NI1 1749 aa30.11■■■□□ 2.41
MAP1LC3A-202ENST00000374837 NBPF8Q3BBV2 869 aa30.11■■■□□ 2.41
MAP1LC3A-202ENST00000374837 SAFB2Q14151 953 aaKnown RBP eCLIP30.1■■■□□ 2.41
MAP1LC3A-202ENST00000374837 DLC1Q96QB1 1528 aa30.1■■■□□ 2.41
MAP1LC3A-202ENST00000374837 NALCNQ8IZF0 1738 aa30.09■■■□□ 2.41
MAP1LC3A-202ENST00000374837 CCER1Q8TC90 406 aaPredicted RBP30.09■■■□□ 2.41
MAP1LC3A-202ENST00000374837 MST1RQ04912 1400 aa30.08■■■□□ 2.41
MAP1LC3A-202ENST00000374837 RGS17Q9UGC6 210 aaPredicted RBP30.08■■■□□ 2.41
MAP1LC3A-202ENST00000374837 KIAA1210Q9ULL0 1709 aa30.05■■■□□ 2.4
MAP1LC3A-202ENST00000374837 BRINP3Q76B58 766 aa30.04■■■□□ 2.4
MAP1LC3A-202ENST00000374837 ROBO1Q9Y6N7 1651 aa30.02■■■□□ 2.4
MAP1LC3A-202ENST00000374837 C1orf167Q5SNV9 1468 aa30.01■■■□□ 2.4
MAP1LC3A-202ENST00000374837 MINK1Q8N4C8 1332 aaPredicted RBP29.98■■■□□ 2.39
MAP1LC3A-202ENST00000374837 NUTM2FA1L443 756 aa29.98■■■□□ 2.39
MAP1LC3A-202ENST00000374837 ROCK2O75116 1388 aaKnown RBP29.98■■■□□ 2.39
MAP1LC3A-202ENST00000374837 CDC42BPGQ6DT37 1551 aa29.98■■■□□ 2.39
MAP1LC3A-202ENST00000374837 ORAI2Q96SN7 254 aa29.97■■■□□ 2.39
MAP1LC3A-202ENST00000374837 HIRIP3Q9BW71 556 aaPredicted RBP29.97■■■□□ 2.39
MAP1LC3A-202ENST00000374837 TIMELESSQ9UNS1 1208 aa29.96■■■□□ 2.39
MAP1LC3A-202ENST00000374837 TRPM1Q7Z4N2 1603 aa29.94■■■□□ 2.38
MAP1LC3A-202ENST00000374837 ESCO1Q5FWF5 840 aa29.92■■■□□ 2.38
MAP1LC3A-202ENST00000374837 GPRASP1Q5JY77 1395 aa29.91■■■□□ 2.38
MAP1LC3A-202ENST00000374837 DDX17Q92841 729 aaKnown RBP29.9■■■□□ 2.38
MAP1LC3A-202ENST00000374837 ARHGEF28Q8N1W1 1705 aaKnown RBP29.89■■■□□ 2.38
MAP1LC3A-202ENST00000374837 WASLO00401 505 aaPredicted RBP29.89■■■□□ 2.38
MAP1LC3A-202ENST00000374837 POTEAQ6S8J7 498 aa29.89■■■□□ 2.38
MAP1LC3A-202ENST00000374837 CENPJQ9HC77 1338 aaPredicted RBP29.89■■■□□ 2.38
MAP1LC3A-202ENST00000374837 CARD11Q9BXL7 1154 aa29.88■■■□□ 2.37
MAP1LC3A-202ENST00000374837 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
MAP1LC3A-202ENST00000374837 ADGRB2O60241 1585 aa29.85■■■□□ 2.37
MAP1LC3A-202ENST00000374837 AHDC1Q5TGY3 1603 aaPredicted RBP29.85■■■□□ 2.37
MAP1LC3A-202ENST00000374837 FMN2Q9NZ56 1722 aa29.83■■■□□ 2.37
MAP1LC3A-202ENST00000374837 CDK19Q9BWU1 502 aa29.82■■■□□ 2.36
MAP1LC3A-202ENST00000374837 PHLPP1O60346 1717 aa29.81■■■□□ 2.36
MAP1LC3A-202ENST00000374837 PRR36Q9H6K5 1346 aa29.8■■■□□ 2.36
MAP1LC3A-202ENST00000374837 FOXO3O43524 673 aa29.8■■■□□ 2.36
MAP1LC3A-202ENST00000374837 ANKARQ7Z5J8 1434 aa29.79■■■□□ 2.36
MAP1LC3A-202ENST00000374837 PHF8Q9UPP1 1060 aa29.79■■■□□ 2.36
MAP1LC3A-202ENST00000374837 COL16A1Q07092 1604 aaPredicted RBP29.78■■■□□ 2.36
MAP1LC3A-202ENST00000374837 EIF3AQ14152 1382 aaKnown RBP29.78■■■□□ 2.36
MAP1LC3A-202ENST00000374837 JCADQ9P266 1359 aa29.77■■■□□ 2.36
MAP1LC3A-202ENST00000374837 SOS2Q07890 1332 aaPredicted RBP29.77■■■□□ 2.36
MAP1LC3A-202ENST00000374837 NPHP3Q7Z494 1330 aa29.76■■■□□ 2.36
MAP1LC3A-202ENST00000374837 LRRC59Q96AG4 307 aaKnown RBP29.76■■■□□ 2.35
MAP1LC3A-202ENST00000374837 NUDT16Q96DE0 195 aaKnown RBP29.76■■■□□ 2.35
MAP1LC3A-202ENST00000374837 NHSL1Q5SYE7 1610 aa29.74■■■□□ 2.35
MAP1LC3A-202ENST00000374837 PMFBP1Q8TBY8 1022 aa29.74■■■□□ 2.35
MAP1LC3A-202ENST00000374837 TULP4Q9NRJ4 1543 aa29.74■■■□□ 2.35
MAP1LC3A-202ENST00000374837 XPCQ01831 940 aaPredicted RBP29.73■■■□□ 2.35
MAP1LC3A-202ENST00000374837 USP32Q8NFA0 1604 aa29.71■■■□□ 2.35
MAP1LC3A-202ENST00000374837 SRPK2P78362 688 aaKnown RBP29.7■■■□□ 2.35
MAP1LC3A-202ENST00000374837 CABP2Q9NPB3 220 aa29.7■■■□□ 2.35
MAP1LC3A-202ENST00000374837 KRT28Q7Z3Y7 464 aa29.69■■■□□ 2.34
MAP1LC3A-202ENST00000374837 EVC2Q86UK5 1308 aa29.68■■■□□ 2.34
MAP1LC3A-202ENST00000374837 ATP7BP35670 1465 aa29.68■■■□□ 2.34
MAP1LC3A-202ENST00000374837 CCDC61Q9Y6R9 512 aa29.67■■■□□ 2.34
MAP1LC3A-202ENST00000374837 PXDNQ92626 1479 aa29.67■■■□□ 2.34
MAP1LC3A-202ENST00000374837 QRICH2Q9H0J4 1663 aa29.66■■■□□ 2.34
MAP1LC3A-202ENST00000374837 RGPD8O14715 1765 aaPredicted RBP29.65■■■□□ 2.34
MAP1LC3A-202ENST00000374837 ST20-MTHFSA0A0A6YYL1 179 aa29.65■■■□□ 2.34
MAP1LC3A-202ENST00000374837 PSME1Q06323 249 aa29.65■■■□□ 2.34
MAP1LC3A-202ENST00000374837 KIF1AQ12756 1690 aa29.64■■■□□ 2.34
MAP1LC3A-202ENST00000374837 SPATA31A6Q5VVP1 1343 aa29.64■■■□□ 2.34
MAP1LC3A-202ENST00000374837 PNPLA6Q8IY17 1366 aa29.64■■■□□ 2.33
MAP1LC3A-202ENST00000374837 NGDNQ8NEJ9 315 aaKnown RBP29.63■■■□□ 2.33
MAP1LC3A-202ENST00000374837 SBNO2Q9Y2G9 1366 aa29.63■■■□□ 2.33
MAP1LC3A-202ENST00000374837 PLEKHG3A1L390 1219 aa29.61■■■□□ 2.33
MAP1LC3A-202ENST00000374837 USP47Q96K76 1375 aa29.6■■■□□ 2.33
MAP1LC3A-202ENST00000374837 TESK2Q96S53 571 aa29.59■■■□□ 2.33
MAP1LC3A-202ENST00000374837 SPATA31A3Q5VYP0 1347 aa29.59■■■□□ 2.33
MAP1LC3A-202ENST00000374837 NUTM2BA6NNL0 878 aaPredicted RBP29.58■■■□□ 2.33
MAP1LC3A-202ENST00000374837 NUTM2EB1AL46 878 aaPredicted RBP29.58■■■□□ 2.33
MAP1LC3A-202ENST00000374837 NUTM2AQ8IVF1 878 aaPredicted RBP29.58■■■□□ 2.33
MAP1LC3A-202ENST00000374837 ACEP12821 1306 aa29.56■■■□□ 2.32
MAP1LC3A-202ENST00000374837 CABP1Q9NZU7 370 aa29.56■■■□□ 2.32
MAP1LC3A-202ENST00000374837 SHPRHQ149N8 1683 aa29.56■■■□□ 2.32
MAP1LC3A-202ENST00000374837 SBNO1A3KN83 1393 aa29.55■■■□□ 2.32
MAP1LC3A-202ENST00000374837 PPIP5K1Q6PFW1 1433 aa29.54■■■□□ 2.32
MAP1LC3A-202ENST00000374837 POLR3AO14802 1390 aaPredicted RBP29.53■■■□□ 2.32
MAP1LC3A-202ENST00000374837 LRP6O75581 1613 aa29.53■■■□□ 2.32
MAP1LC3A-202ENST00000374837 SLC24A1O60721 1099 aa29.5■■■□□ 2.31
MAP1LC3A-202ENST00000374837 LMOD2Q6P5Q4 547 aa29.5■■■□□ 2.31
MAP1LC3A-202ENST00000374837 TNS3Q68CZ2 1445 aa29.5■■■□□ 2.31
MAP1LC3A-202ENST00000374837 ATAD2Q6PL18 1390 aa29.5■■■□□ 2.31
MAP1LC3A-202ENST00000374837 MEX3CQ5U5Q3 659 aaKnown RBP29.49■■■□□ 2.31
MAP1LC3A-202ENST00000374837 TOPAZ1Q8N9V7 1692 aa29.49■■■□□ 2.31
MAP1LC3A-202ENST00000374837 ITSN1Q15811 1721 aa29.48■■■□□ 2.31
MAP1LC3A-202ENST00000374837 PAK3O75914 559 aaPredicted RBP29.47■■■□□ 2.31
MAP1LC3A-202ENST00000374837 PUS7Q96PZ0 661 aaKnown RBP29.47■■■□□ 2.31
MAP1LC3A-202ENST00000374837 UPF1Q92900 1129 aaKnown RBP eCLIP29.46■■■□□ 2.31
MAP1LC3A-202ENST00000374837 ARHGEF10O15013 1369 aa29.44■■■□□ 2.3
MAP1LC3A-202ENST00000374837 ADAMTS2O95450 1211 aa29.44■■■□□ 2.3
MAP1LC3A-202ENST00000374837 TMF1P82094 1093 aa29.43■■■□□ 2.3
MAP1LC3A-202ENST00000374837 ZNF772Q68DY9 489 aaPredicted RBP29.43■■■□□ 2.3
MAP1LC3A-202ENST00000374837 PLEKHG5O94827 1062 aa29.42■■■□□ 2.3
MAP1LC3A-202ENST00000374837 EIF4G2P78344 907 aaKnown RBP eCLIP29.42■■■□□ 2.3
MAP1LC3A-202ENST00000374837 CABLES1Q8TDN4 633 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms