RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 OFD1O75665 1012 aa18.8■□□□□ 0.6
CHST3-201ENST00000373115 NAT10Q9H0A0 1025 aaKnown RBP18.8■□□□□ 0.6
CHST3-201ENST00000373115 DIAPH1O60610 1272 aaKnown RBP18.8■□□□□ 0.6
CHST3-201ENST00000373115 DHX37Q8IY37 1157 aaKnown RBP18.8■□□□□ 0.6
CHST3-201ENST00000373115 PANK1Q8TE04 598 aa18.8■□□□□ 0.6
CHST3-201ENST00000373115 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
CHST3-201ENST00000373115 RDXP35241 583 aaKnown RBP18.79■□□□□ 0.6
CHST3-201ENST00000373115 ROCK1Q13464 1354 aa18.79■□□□□ 0.6
CHST3-201ENST00000373115 AIMP1Q12904 312 aaKnown RBP18.79■□□□□ 0.6
CHST3-201ENST00000373115 CCDC191Q8NCU4 936 aa18.79■□□□□ 0.6
CHST3-201ENST00000373115 TRIM5Q9C035 493 aa18.79■□□□□ 0.6
CHST3-201ENST00000373115 SDF4Q9BRK5 362 aa18.79■□□□□ 0.6
CHST3-201ENST00000373115 DDX58O95786 925 aaKnown RBP18.78■□□□□ 0.6
CHST3-201ENST00000373115 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
CHST3-201ENST00000373115 SPC24Q8NBT2 197 aa18.78■□□□□ 0.6
CHST3-201ENST00000373115 API5Q9BZZ5 524 aaKnown RBP18.78■□□□□ 0.6
CHST3-201ENST00000373115 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
CHST3-201ENST00000373115 USP47Q96K76 1375 aa18.78■□□□□ 0.6
CHST3-201ENST00000373115 CWC15Q9P013 229 aaKnown RBP18.78■□□□□ 0.6
CHST3-201ENST00000373115 HMOX1P09601 288 aa18.78■□□□□ 0.6
CHST3-201ENST00000373115 RALYLQ86SE5 291 aaKnown RBP18.78■□□□□ 0.6
CHST3-201ENST00000373115 CCDC173Q0VFZ6 552 aa18.77■□□□□ 0.6
CHST3-201ENST00000373115 TSPYL4Q9UJ04 414 aa18.77■□□□□ 0.6
CHST3-201ENST00000373115 FMNL2Q96PY5 1086 aa18.77■□□□□ 0.59
CHST3-201ENST00000373115 MRE11P49959 708 aa18.77■□□□□ 0.59
CHST3-201ENST00000373115 ERC2O15083 957 aa18.76■□□□□ 0.59
CHST3-201ENST00000373115 DCTN1Q14203 1278 aa18.76■□□□□ 0.59
CHST3-201ENST00000373115 TRAK2O60296 914 aa18.76■□□□□ 0.59
CHST3-201ENST00000373115 CEBPZQ03701 1054 aaKnown RBP18.75■□□□□ 0.59
CHST3-201ENST00000373115 BRPF3Q9ULD4 1205 aa18.75■□□□□ 0.59
CHST3-201ENST00000373115 BRMS1Q9HCU9 246 aa18.75■□□□□ 0.59
CHST3-201ENST00000373115 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.75■□□□□ 0.59
CHST3-201ENST00000373115 FHOD3Q2V2M9 1422 aa18.74■□□□□ 0.59
CHST3-201ENST00000373115 RIC3Q7Z5B4 369 aa18.74■□□□□ 0.59
CHST3-201ENST00000373115 TSPYL1Q9H0U9 437 aa18.74■□□□□ 0.59
CHST3-201ENST00000373115 ATP2B1P20020 1258 aa18.74■□□□□ 0.59
CHST3-201ENST00000373115 TSPY26PQ9H489 355 aa18.74■□□□□ 0.59
CHST3-201ENST00000373115 AXDND1Q5T1B0 1012 aaPredicted RBP18.73■□□□□ 0.59
CHST3-201ENST00000373115 PRPF40AO75400 957 aaKnown RBP18.73■□□□□ 0.59
CHST3-201ENST00000373115 ERCC4Q92889 916 aaPredicted RBP18.73■□□□□ 0.59
CHST3-201ENST00000373115 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
CHST3-201ENST00000373115 MPNDQ8N594 471 aa18.72■□□□□ 0.59
CHST3-201ENST00000373115 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
CHST3-201ENST00000373115 CDC45O75419 566 aa18.72■□□□□ 0.59
CHST3-201ENST00000373115 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
CHST3-201ENST00000373115 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
CHST3-201ENST00000373115 NINLQ9Y2I6 1382 aa18.71■□□□□ 0.59
CHST3-201ENST00000373115 RBM33Q96EV2 1170 aaKnown RBP18.71■□□□□ 0.59
CHST3-201ENST00000373115 LEKR1Q6ZMV7 388 aa18.71■□□□□ 0.58
CHST3-201ENST00000373115 IKQ13123 557 aaPredicted RBP18.7■□□□□ 0.58
CHST3-201ENST00000373115 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
CHST3-201ENST00000373115 CNTROBQ8N137 903 aa18.7■□□□□ 0.58
CHST3-201ENST00000373115 MYO6Q9UM54 1294 aa18.69■□□□□ 0.58
CHST3-201ENST00000373115 KLHL34Q8N239 644 aa18.69■□□□□ 0.58
CHST3-201ENST00000373115 CCDC66A2RUB6 948 aa18.69■□□□□ 0.58
CHST3-201ENST00000373115 PSME1Q06323 249 aa18.69■□□□□ 0.58
CHST3-201ENST00000373115 PSMA5P28066 241 aa18.69■□□□□ 0.58
CHST3-201ENST00000373115 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
CHST3-201ENST00000373115 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
CHST3-201ENST00000373115 XBP1P17861 261 aa18.68■□□□□ 0.58
CHST3-201ENST00000373115 FSD1Q9BTV5 496 aa18.68■□□□□ 0.58
CHST3-201ENST00000373115 UACAQ9BZF9 1416 aa18.68■□□□□ 0.58
CHST3-201ENST00000373115 LETM1O95202 739 aaPredicted RBP18.68■□□□□ 0.58
CHST3-201ENST00000373115 STK11IPQ8N1F8 1099 aa18.68■□□□□ 0.58
CHST3-201ENST00000373115 DHX57Q6P158 1386 aaKnown RBP18.68■□□□□ 0.58
CHST3-201ENST00000373115 MAGEC2Q9UBF1 373 aaPredicted RBP18.68■□□□□ 0.58
CHST3-201ENST00000373115 NEFHP12036 1026 aa18.68■□□□□ 0.58
CHST3-201ENST00000373115 SMARCE1Q969G3 411 aa18.68■□□□□ 0.58
CHST3-201ENST00000373115 KINO60870 393 aaKnown RBP18.67■□□□□ 0.58
CHST3-201ENST00000373115 UBTFL1P0CB47 393 aaPredicted RBP18.67■□□□□ 0.58
CHST3-201ENST00000373115 HSP90AB4PQ58FF6 505 aa18.67■□□□□ 0.58
CHST3-201ENST00000373115 TMEM132AQ24JP5 1023 aa18.67■□□□□ 0.58
CHST3-201ENST00000373115 IL27Q8NEV9 243 aa18.67■□□□□ 0.58
CHST3-201ENST00000373115 MTERF4Q7Z6M4 381 aaKnown RBP18.67■□□□□ 0.58
CHST3-201ENST00000373115 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
CHST3-201ENST00000373115 FIBPO43427 364 aa18.66■□□□□ 0.58
CHST3-201ENST00000373115 FILIP1LQ4L180 1135 aa18.66■□□□□ 0.58
CHST3-201ENST00000373115 ZNF428Q96B54 188 aa18.66■□□□□ 0.58
CHST3-201ENST00000373115 CT47B1P0C2W7 299 aaPredicted RBP18.66■□□□□ 0.58
CHST3-201ENST00000373115 C1orf115Q9H7X2 142 aa18.65■□□□□ 0.58
CHST3-201ENST00000373115 FAM177A1Q8N128 213 aaPredicted RBP18.65■□□□□ 0.58
CHST3-201ENST00000373115 ANKRD62A6NC57 917 aa18.65■□□□□ 0.58
CHST3-201ENST00000373115 CDK5RAP3Q96JB5 506 aa18.65■□□□□ 0.58
CHST3-201ENST00000373115 NEK4P51957 841 aa18.65■□□□□ 0.58
CHST3-201ENST00000373115 NUTM2GQ5VZR2 741 aa18.65■□□□□ 0.58
CHST3-201ENST00000373115 FAM177BA6PVY3 158 aa18.65■□□□□ 0.58
CHST3-201ENST00000373115 VGFO15240 615 aaPredicted RBP18.65■□□□□ 0.58
CHST3-201ENST00000373115 GNAI1P63096 354 aa18.64■□□□□ 0.57
CHST3-201ENST00000373115 STK3Q13188 491 aa18.64■□□□□ 0.57
CHST3-201ENST00000373115 NACADO15069 1562 aa18.63■□□□□ 0.57
CHST3-201ENST00000373115 SERPINC1P01008 464 aa18.63■□□□□ 0.57
CHST3-201ENST00000373115 FAM193AP78312 1265 aa18.62■□□□□ 0.57
CHST3-201ENST00000373115 SYCP1Q15431 976 aa18.62■□□□□ 0.57
CHST3-201ENST00000373115 PKNOX2Q96KN3 472 aa18.62■□□□□ 0.57
CHST3-201ENST00000373115 MEX3CQ5U5Q3 659 aaKnown RBP18.62■□□□□ 0.57
CHST3-201ENST00000373115 CENPHQ9H3R5 247 aa18.61■□□□□ 0.57
CHST3-201ENST00000373115 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
CHST3-201ENST00000373115 MAP4K4O95819 1239 aaPredicted RBP18.61■□□□□ 0.57
CHST3-201ENST00000373115 CCP110O43303 1012 aa18.6■□□□□ 0.57
CHST3-201ENST00000373115 ENOX2Q16206 610 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms