RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 STAC3Q96MF2 364 aa33.07■■■□□ 2.88
COL9A2-201ENST00000372736 SHPRHQ149N8 1683 aa33.05■■■□□ 2.88
COL9A2-201ENST00000372736 DLC1Q96QB1 1528 aa33.05■■■□□ 2.88
COL9A2-201ENST00000372736 SIRT1Q96EB6 747 aa33.03■■■□□ 2.88
COL9A2-201ENST00000372736 FMN2Q9NZ56 1722 aa33■■■□□ 2.87
COL9A2-201ENST00000372736 PHF23Q9BUL5 403 aaPredicted RBP32.98■■■□□ 2.87
COL9A2-201ENST00000372736 TRIM26Q12899 539 aaPredicted RBP32.97■■■□□ 2.87
COL9A2-201ENST00000372736 DDX17Q92841 729 aaKnown RBP32.96■■■□□ 2.87
COL9A2-201ENST00000372736 ORAI2Q96SN7 254 aa32.96■■■□□ 2.87
COL9A2-201ENST00000372736 KIAA1210Q9ULL0 1709 aa32.95■■■□□ 2.87
COL9A2-201ENST00000372736 PRAM1Q96QH2 718 aa32.94■■■□□ 2.86
COL9A2-201ENST00000372736 LRP6O75581 1613 aa32.93■■■□□ 2.86
COL9A2-201ENST00000372736 ADGRB2O60241 1585 aa32.92■■■□□ 2.86
COL9A2-201ENST00000372736 SPATA31A6Q5VVP1 1343 aa32.91■■■□□ 2.86
COL9A2-201ENST00000372736 ARHGEF28Q8N1W1 1705 aaKnown RBP32.91■■■□□ 2.86
COL9A2-201ENST00000372736 TRAK1Q9UPV9 953 aa32.88■■■□□ 2.85
COL9A2-201ENST00000372736 SAFB2Q14151 953 aaKnown RBP eCLIP32.87■■■□□ 2.85
COL9A2-201ENST00000372736 SIN3AQ96ST3 1273 aa32.87■■■□□ 2.85
COL9A2-201ENST00000372736 RGS17Q9UGC6 210 aaPredicted RBP32.87■■■□□ 2.85
COL9A2-201ENST00000372736 SOS2Q07890 1332 aaPredicted RBP32.86■■■□□ 2.85
COL9A2-201ENST00000372736 NUTM2FA1L443 756 aa32.85■■■□□ 2.85
COL9A2-201ENST00000372736 ESCO1Q5FWF5 840 aa32.85■■■□□ 2.85
COL9A2-201ENST00000372736 LRRC59Q96AG4 307 aaKnown RBP32.85■■■□□ 2.85
COL9A2-201ENST00000372736 POGKQ9P215 609 aa32.85■■■□□ 2.85
COL9A2-201ENST00000372736 KIF1AQ12756 1690 aa32.85■■■□□ 2.85
COL9A2-201ENST00000372736 PNPLA6Q8IY17 1366 aa32.84■■■□□ 2.85
COL9A2-201ENST00000372736 RGPD8O14715 1765 aaPredicted RBP32.84■■■□□ 2.85
COL9A2-201ENST00000372736 PXDNQ92626 1479 aa32.83■■■□□ 2.85
COL9A2-201ENST00000372736 USP32Q8NFA0 1604 aa32.81■■■□□ 2.84
COL9A2-201ENST00000372736 L3MBTL2Q969R5 705 aa32.81■■■□□ 2.84
COL9A2-201ENST00000372736 NPHP3Q7Z494 1330 aa32.79■■■□□ 2.84
COL9A2-201ENST00000372736 NEUROD1Q13562 356 aa32.76■■■□□ 2.83
COL9A2-201ENST00000372736 ANKARQ7Z5J8 1434 aa32.76■■■□□ 2.83
COL9A2-201ENST00000372736 NBPF1Q3BBV0 1214 aa32.75■■■□□ 2.83
COL9A2-201ENST00000372736 COL22A1Q8NFW1 1626 aaPredicted RBP32.75■■■□□ 2.83
COL9A2-201ENST00000372736 MINK1Q8N4C8 1332 aaPredicted RBP32.75■■■□□ 2.83
COL9A2-201ENST00000372736 SOCS7O14512 581 aa32.74■■■□□ 2.83
COL9A2-201ENST00000372736 FOXO3O43524 673 aa32.74■■■□□ 2.83
COL9A2-201ENST00000372736 HIRIP3Q9BW71 556 aaPredicted RBP32.74■■■□□ 2.83
COL9A2-201ENST00000372736 TRPM1Q7Z4N2 1603 aa32.73■■■□□ 2.83
COL9A2-201ENST00000372736 NUTM2BA6NNL0 878 aaPredicted RBP32.72■■■□□ 2.83
COL9A2-201ENST00000372736 NUTM2EB1AL46 878 aaPredicted RBP32.72■■■□□ 2.83
COL9A2-201ENST00000372736 NUTM2AQ8IVF1 878 aaPredicted RBP32.72■■■□□ 2.83
COL9A2-201ENST00000372736 TULP4Q9NRJ4 1543 aa32.72■■■□□ 2.83
COL9A2-201ENST00000372736 MEX3CQ5U5Q3 659 aaKnown RBP32.71■■■□□ 2.83
COL9A2-201ENST00000372736 XPCQ01831 940 aaPredicted RBP32.7■■■□□ 2.83
COL9A2-201ENST00000372736 POTEAQ6S8J7 498 aa32.69■■■□□ 2.82
COL9A2-201ENST00000372736 PHF8Q9UPP1 1060 aa32.68■■■□□ 2.82
COL9A2-201ENST00000372736 EIF3AQ14152 1382 aaKnown RBP32.68■■■□□ 2.82
COL9A2-201ENST00000372736 WASLO00401 505 aaPredicted RBP32.66■■■□□ 2.82
COL9A2-201ENST00000372736 PRR36Q9H6K5 1346 aa32.65■■■□□ 2.82
COL9A2-201ENST00000372736 ATP7BP35670 1465 aa32.61■■■□□ 2.81
COL9A2-201ENST00000372736 ITSN1Q15811 1721 aa32.61■■■□□ 2.81
COL9A2-201ENST00000372736 QRICH2Q9H0J4 1663 aa32.59■■■□□ 2.81
COL9A2-201ENST00000372736 SPATA31A3Q5VYP0 1347 aa32.58■■■□□ 2.81
COL9A2-201ENST00000372736 KRT28Q7Z3Y7 464 aa32.58■■■□□ 2.81
COL9A2-201ENST00000372736 TNS3Q68CZ2 1445 aa32.58■■■□□ 2.81
COL9A2-201ENST00000372736 TRPM3Q9HCF6 1732 aaPredicted RBP32.57■■■□□ 2.8
COL9A2-201ENST00000372736 TOPAZ1Q8N9V7 1692 aa32.56■■■□□ 2.8
COL9A2-201ENST00000372736 ZNF772Q68DY9 489 aaPredicted RBP32.56■■■□□ 2.8
COL9A2-201ENST00000372736 PMFBP1Q8TBY8 1022 aa32.56■■■□□ 2.8
COL9A2-201ENST00000372736 AFF2P51816 1311 aa32.55■■■□□ 2.8
COL9A2-201ENST00000372736 MARF1Q9Y4F3 1742 aaKnown RBP32.55■■■□□ 2.8
COL9A2-201ENST00000372736 TONSLQ96HA7 1378 aa32.55■■■□□ 2.8
COL9A2-201ENST00000372736 CENPJQ9HC77 1338 aaPredicted RBP32.54■■■□□ 2.8
COL9A2-201ENST00000372736 ADAMTS2O95450 1211 aa32.54■■■□□ 2.8
COL9A2-201ENST00000372736 NBPF8Q3BBV2 869 aa32.54■■■□□ 2.8
COL9A2-201ENST00000372736 C8orf37Q96NL8 207 aa32.54■■■□□ 2.8
COL9A2-201ENST00000372736 SBNO1A3KN83 1393 aa32.54■■■□□ 2.8
COL9A2-201ENST00000372736 ROCK2O75116 1388 aaKnown RBP32.54■■■□□ 2.8
COL9A2-201ENST00000372736 PSME1Q06323 249 aa32.51■■■□□ 2.79
COL9A2-201ENST00000372736 CDK19Q9BWU1 502 aa32.51■■■□□ 2.79
COL9A2-201ENST00000372736 GPRASP1Q5JY77 1395 aa32.5■■■□□ 2.79
COL9A2-201ENST00000372736 ABCA3Q99758 1704 aa32.49■■■□□ 2.79
COL9A2-201ENST00000372736 NUDT16Q96DE0 195 aaKnown RBP32.49■■■□□ 2.79
COL9A2-201ENST00000372736 ALS2Q96Q42 1657 aa32.48■■■□□ 2.79
COL9A2-201ENST00000372736 RALGAPBQ86X10 1494 aa32.46■■■□□ 2.79
COL9A2-201ENST00000372736 ARHGEF10O15013 1369 aa32.45■■■□□ 2.78
COL9A2-201ENST00000372736 NGLY1Q96IV0 654 aa32.44■■■□□ 2.78
COL9A2-201ENST00000372736 NGDNQ8NEJ9 315 aaKnown RBP32.41■■■□□ 2.78
COL9A2-201ENST00000372736 POLR3AO14802 1390 aaPredicted RBP32.4■■■□□ 2.78
COL9A2-201ENST00000372736 FNBP4Q8N3X1 1017 aaPredicted RBP32.39■■■□□ 2.78
COL9A2-201ENST00000372736 CCDC61Q9Y6R9 512 aa32.39■■■□□ 2.78
COL9A2-201ENST00000372736 LMOD2Q6P5Q4 547 aa32.37■■■□□ 2.77
COL9A2-201ENST00000372736 PCGF6Q9BYE7 350 aa32.37■■■□□ 2.77
COL9A2-201ENST00000372736 CRYBG1Q9Y4K1 1723 aa32.37■■■□□ 2.77
COL9A2-201ENST00000372736 CDK12Q9NYV4 1490 aaPredicted RBP32.36■■■□□ 2.77
COL9A2-201ENST00000372736 SRPK2P78362 688 aaKnown RBP32.36■■■□□ 2.77
COL9A2-201ENST00000372736 RXRBP28702 533 aa32.35■■■□□ 2.77
COL9A2-201ENST00000372736 CABLES1Q8TDN4 633 aa32.35■■■□□ 2.77
COL9A2-201ENST00000372736 CABP2Q9NPB3 220 aa32.35■■■□□ 2.77
COL9A2-201ENST00000372736 PPIP5K1Q6PFW1 1433 aa32.34■■■□□ 2.77
COL9A2-201ENST00000372736 PLEKHG3A1L390 1219 aa32.34■■■□□ 2.77
COL9A2-201ENST00000372736 QTRT2Q9H974 415 aaKnown RBP32.34■■■□□ 2.77
COL9A2-201ENST00000372736 USP21Q9UK80 565 aa32.34■■■□□ 2.77
COL9A2-201ENST00000372736 BCL9LQ86UU0 1499 aa32.34■■■□□ 2.77
COL9A2-201ENST00000372736 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.34■■■□□ 2.77
COL9A2-201ENST00000372736 ACEP12821 1306 aa32.32■■■□□ 2.76
COL9A2-201ENST00000372736 CARD11Q9BXL7 1154 aa32.32■■■□□ 2.76
COL9A2-201ENST00000372736 ATRNO75882 1429 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms