RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 IFIT2P09913 472 aaKnown RBP9.37□□□□□ -0.91
COL21A1-203ENST00000370819 NEK4P51957 841 aa9.37□□□□□ -0.91
COL21A1-203ENST00000370819 CASKIN1Q8WXD9 1431 aa9.37□□□□□ -0.91
COL21A1-203ENST00000370819 C11orf95C9JLR9 678 aaPredicted RBP9.37□□□□□ -0.91
COL21A1-203ENST00000370819 PRPF40AO75400 957 aaKnown RBP9.37□□□□□ -0.91
COL21A1-203ENST00000370819 FBXW7Q969H0 707 aa9.37□□□□□ -0.91
COL21A1-203ENST00000370819 EID1Q9Y6B2 187 aa9.37□□□□□ -0.91
COL21A1-203ENST00000370819 CUX1P39880 1505 aa9.36□□□□□ -0.91
COL21A1-203ENST00000370819 DNMBPQ6XZF7 1577 aa9.36□□□□□ -0.91
COL21A1-203ENST00000370819 IFT57Q9NWB7 429 aa9.36□□□□□ -0.91
COL21A1-203ENST00000370819 TRHP20396 242 aaPredicted RBP9.36□□□□□ -0.91
COL21A1-203ENST00000370819 HOMER1Q86YM7 354 aa9.36□□□□□ -0.91
COL21A1-203ENST00000370819 MPNDQ8N594 471 aa9.36□□□□□ -0.91
COL21A1-203ENST00000370819 SLC12A5Q9H2X9 1139 aa9.36□□□□□ -0.91
COL21A1-203ENST00000370819 GAPVD1Q14C86 1478 aa9.36□□□□□ -0.91
COL21A1-203ENST00000370819 WDR62O43379 1518 aa9.35□□□□□ -0.91
COL21A1-203ENST00000370819 TSPYL4Q9UJ04 414 aa9.35□□□□□ -0.91
COL21A1-203ENST00000370819 FOSBP53539 338 aa9.35□□□□□ -0.91
COL21A1-203ENST00000370819 RBM10P98175 930 aaKnown RBP9.35□□□□□ -0.91
COL21A1-203ENST00000370819 PDE4CQ08493 712 aa9.35□□□□□ -0.91
COL21A1-203ENST00000370819 MCM4P33991 863 aa9.35□□□□□ -0.91
COL21A1-203ENST00000370819 TPD52L1Q16890 204 aaPredicted RBP9.35□□□□□ -0.91
COL21A1-203ENST00000370819 ROCK1Q13464 1354 aa9.35□□□□□ -0.91
COL21A1-203ENST00000370819 NEXNQ0ZGT2 675 aa9.34□□□□□ -0.91
COL21A1-203ENST00000370819 FYCO1Q9BQS8 1478 aa9.34□□□□□ -0.91
COL21A1-203ENST00000370819 CPLX2Q6PUV4 134 aaKnown RBP9.34□□□□□ -0.91
COL21A1-203ENST00000370819 SASS6Q6UVJ0 657 aa9.34□□□□□ -0.91
COL21A1-203ENST00000370819 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
COL21A1-203ENST00000370819 CPLX1O14810 134 aa9.34□□□□□ -0.91
COL21A1-203ENST00000370819 PRKAR2BP31323 418 aa9.34□□□□□ -0.91
COL21A1-203ENST00000370819 CCDC27Q2M243 656 aa9.34□□□□□ -0.91
COL21A1-203ENST00000370819 C20orf194Q5TEA3 1177 aa9.34□□□□□ -0.91
COL21A1-203ENST00000370819 RNF20Q5VTR2 975 aa9.34□□□□□ -0.91
COL21A1-203ENST00000370819 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
COL21A1-203ENST00000370819 C1orf141Q5JVX7 400 aa9.33□□□□□ -0.92
COL21A1-203ENST00000370819 HFM1A2PYH4 1435 aa9.33□□□□□ -0.92
COL21A1-203ENST00000370819 MBD3O95983 291 aa9.33□□□□□ -0.92
COL21A1-203ENST00000370819 AFAP1Q8N556 730 aa9.33□□□□□ -0.92
COL21A1-203ENST00000370819 GRPEL1Q9HAV7 217 aa9.33□□□□□ -0.92
COL21A1-203ENST00000370819 CCDC39Q9UFE4 941 aa9.33□□□□□ -0.92
COL21A1-203ENST00000370819 NOB1Q9ULX3 412 aaKnown RBP9.33□□□□□ -0.92
COL21A1-203ENST00000370819 G3BP1Q13283 466 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL21A1-203ENST00000370819 ESPNB1AK53 854 aa9.32□□□□□ -0.92
COL21A1-203ENST00000370819 RABEP1Q15276 862 aa9.32□□□□□ -0.92
COL21A1-203ENST00000370819 FIBPO43427 364 aa9.32□□□□□ -0.92
COL21A1-203ENST00000370819 TSR1Q2NL82 804 aaKnown RBP9.32□□□□□ -0.92
COL21A1-203ENST00000370819 CCDC73Q6ZRK6 1079 aa9.32□□□□□ -0.92
COL21A1-203ENST00000370819 CHMP4CQ96CF2 233 aa9.32□□□□□ -0.92
COL21A1-203ENST00000370819 MRC2Q9UBG0 1479 aa9.32□□□□□ -0.92
COL21A1-203ENST00000370819 TOPBP1Q92547 1522 aa9.31□□□□□ -0.92
COL21A1-203ENST00000370819 SURF6O75683 361 aaKnown RBP9.31□□□□□ -0.92
COL21A1-203ENST00000370819 APPP05067 770 aa9.31□□□□□ -0.92
COL21A1-203ENST00000370819 NCBP3Q53F19 620 aaKnown RBP9.31□□□□□ -0.92
COL21A1-203ENST00000370819 UBTFL1P0CB47 393 aaPredicted RBP9.31□□□□□ -0.92
COL21A1-203ENST00000370819 TWISTNBQ3B726 338 aaPredicted RBP9.31□□□□□ -0.92
COL21A1-203ENST00000370819 ATF7IPQ6VMQ6 1270 aa9.31□□□□□ -0.92
COL21A1-203ENST00000370819 MAP7D2Q96T17 732 aa9.31□□□□□ -0.92
COL21A1-203ENST00000370819 PRXQ9BXM0 1461 aa9.31□□□□□ -0.92
COL21A1-203ENST00000370819 TPM1P09493 284 aa9.31□□□□□ -0.92
COL21A1-203ENST00000370819 AKAP17AQ02040 695 aaKnown RBP9.31□□□□□ -0.92
COL21A1-203ENST00000370819 CCDC173Q0VFZ6 552 aa9.31□□□□□ -0.92
COL21A1-203ENST00000370819 MVPQ14764 893 aaKnown RBP9.3□□□□□ -0.92
COL21A1-203ENST00000370819 SDF4Q9BRK5 362 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 TRIM5Q9C035 493 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 KIAA1107Q9UPP5 1409 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 ERC2O15083 957 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 TPM2P07951 284 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 GTF2E1P29083 439 aaPredicted RBP9.3□□□□□ -0.92
COL21A1-203ENST00000370819 GCC1Q96CN9 775 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 ERICH3Q5RHP9 1530 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 GPS2Q13227 327 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 HSP90AB4PQ58FF6 505 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 SYNE3Q6ZMZ3 975 aa9.3□□□□□ -0.92
COL21A1-203ENST00000370819 K7ELQ4 463 aaPredicted RBP9.29□□□□□ -0.92
COL21A1-203ENST00000370819 TRIM29Q14134 588 aa9.29□□□□□ -0.92
COL21A1-203ENST00000370819 TSPY26PQ9H489 355 aa9.29□□□□□ -0.92
COL21A1-203ENST00000370819 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.29□□□□□ -0.92
COL21A1-203ENST00000370819 MARCH6O60337 910 aa9.29□□□□□ -0.92
COL21A1-203ENST00000370819 DDX58O95786 925 aaKnown RBP9.29□□□□□ -0.92
COL21A1-203ENST00000370819 SLFN5Q08AF3 891 aa9.29□□□□□ -0.92
COL21A1-203ENST00000370819 AIMP1Q12904 312 aaKnown RBP9.29□□□□□ -0.92
COL21A1-203ENST00000370819 CLASRPQ8N2M8 674 aaKnown RBP9.29□□□□□ -0.92
COL21A1-203ENST00000370819 MNS1Q8NEH6 495 aa9.29□□□□□ -0.92
COL21A1-203ENST00000370819 GNAI3P08754 354 aa9.28□□□□□ -0.92
COL21A1-203ENST00000370819 MTERF4Q7Z6M4 381 aaKnown RBP9.28□□□□□ -0.92
COL21A1-203ENST00000370819 SPC24Q8NBT2 197 aa9.28□□□□□ -0.92
COL21A1-203ENST00000370819 NAIPQ13075 1403 aa9.28□□□□□ -0.92
COL21A1-203ENST00000370819 TTC5Q8N0Z6 440 aa9.28□□□□□ -0.92
COL21A1-203ENST00000370819 FMNL2Q96PY5 1086 aa9.28□□□□□ -0.92
COL21A1-203ENST00000370819 TRDNQ13061 729 aa9.28□□□□□ -0.92
COL21A1-203ENST00000370819 LRRFIP1Q32MZ4 808 aaKnown RBP9.28□□□□□ -0.92
COL21A1-203ENST00000370819 NEUROD6Q96NK8 337 aa9.28□□□□□ -0.92
COL21A1-203ENST00000370819 AQRO60306 1485 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL21A1-203ENST00000370819 IPO7O95373 1038 aaKnown RBP9.27□□□□□ -0.92
COL21A1-203ENST00000370819 MCM2P49736 904 aa9.27□□□□□ -0.92
COL21A1-203ENST00000370819 NUTM2GQ5VZR2 741 aa9.27□□□□□ -0.92
COL21A1-203ENST00000370819 CHD1LQ86WJ1 897 aa9.27□□□□□ -0.92
COL21A1-203ENST00000370819 WDR63Q8IWG1 891 aa9.27□□□□□ -0.92
COL21A1-203ENST00000370819 TARBP1Q13395 1621 aaKnown RBP9.27□□□□□ -0.93
COL21A1-203ENST00000370819 TEX35Q5T0J7 233 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms