RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 SIRT1Q96EB6 747 aa21.08■□□□□ 0.97
SSR4-203ENST00000370086 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
SSR4-203ENST00000370086 SHPRHQ149N8 1683 aa21.07■□□□□ 0.96
SSR4-203ENST00000370086 JCADQ9P266 1359 aa21.07■□□□□ 0.96
SSR4-203ENST00000370086 DDX17Q92841 729 aaKnown RBP21.06■□□□□ 0.96
SSR4-203ENST00000370086 DLC1Q96QB1 1528 aa21.05■□□□□ 0.96
SSR4-203ENST00000370086 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
SSR4-203ENST00000370086 ORAI2Q96SN7 254 aa21.05■□□□□ 0.96
SSR4-203ENST00000370086 RGPD8O14715 1765 aaPredicted RBP21.02■□□□□ 0.96
SSR4-203ENST00000370086 KIAA1210Q9ULL0 1709 aa21.02■□□□□ 0.96
SSR4-203ENST00000370086 PRAM1Q96QH2 718 aa21.02■□□□□ 0.96
SSR4-203ENST00000370086 SIN3AQ96ST3 1273 aa21.02■□□□□ 0.96
SSR4-203ENST00000370086 PHF23Q9BUL5 403 aaPredicted RBP21.02■□□□□ 0.96
SSR4-203ENST00000370086 TRAK1Q9UPV9 953 aa21.01■□□□□ 0.95
SSR4-203ENST00000370086 SAFB2Q14151 953 aaKnown RBP eCLIP21■□□□□ 0.95
SSR4-203ENST00000370086 ARHGEF28Q8N1W1 1705 aaKnown RBP20.99■□□□□ 0.95
SSR4-203ENST00000370086 NUTM2FA1L443 756 aa20.99■□□□□ 0.95
SSR4-203ENST00000370086 LRP6O75581 1613 aa20.98■□□□□ 0.95
SSR4-203ENST00000370086 ESCO1Q5FWF5 840 aa20.98■□□□□ 0.95
SSR4-203ENST00000370086 RGS17Q9UGC6 210 aaPredicted RBP20.98■□□□□ 0.95
SSR4-203ENST00000370086 POGKQ9P215 609 aa20.97■□□□□ 0.95
SSR4-203ENST00000370086 SPATA31A6Q5VVP1 1343 aa20.97■□□□□ 0.95
SSR4-203ENST00000370086 LRRC59Q96AG4 307 aaKnown RBP20.96■□□□□ 0.95
SSR4-203ENST00000370086 ADGRB2O60241 1585 aa20.96■□□□□ 0.95
SSR4-203ENST00000370086 NEUROD1Q13562 356 aa20.95■□□□□ 0.94
SSR4-203ENST00000370086 L3MBTL2Q969R5 705 aa20.95■□□□□ 0.94
SSR4-203ENST00000370086 SOS2Q07890 1332 aaPredicted RBP20.95■□□□□ 0.94
SSR4-203ENST00000370086 USP32Q8NFA0 1604 aa20.93■□□□□ 0.94
SSR4-203ENST00000370086 KIF1AQ12756 1690 aa20.93■□□□□ 0.94
SSR4-203ENST00000370086 NBPF1Q3BBV0 1214 aa20.92■□□□□ 0.94
SSR4-203ENST00000370086 PNPLA6Q8IY17 1366 aa20.92■□□□□ 0.94
SSR4-203ENST00000370086 FOXO3O43524 673 aa20.91■□□□□ 0.94
SSR4-203ENST00000370086 MINK1Q8N4C8 1332 aaPredicted RBP20.91■□□□□ 0.94
SSR4-203ENST00000370086 PXDNQ92626 1479 aa20.91■□□□□ 0.94
SSR4-203ENST00000370086 NPHP3Q7Z494 1330 aa20.9■□□□□ 0.94
SSR4-203ENST00000370086 NUTM2BA6NNL0 878 aaPredicted RBP20.9■□□□□ 0.94
SSR4-203ENST00000370086 NUTM2EB1AL46 878 aaPredicted RBP20.9■□□□□ 0.94
SSR4-203ENST00000370086 NUTM2AQ8IVF1 878 aaPredicted RBP20.9■□□□□ 0.94
SSR4-203ENST00000370086 HIRIP3Q9BW71 556 aaPredicted RBP20.9■□□□□ 0.94
SSR4-203ENST00000370086 TRPM1Q7Z4N2 1603 aa20.89■□□□□ 0.94
SSR4-203ENST00000370086 XPCQ01831 940 aaPredicted RBP20.88■□□□□ 0.93
SSR4-203ENST00000370086 COL22A1Q8NFW1 1626 aaPredicted RBP20.87■□□□□ 0.93
SSR4-203ENST00000370086 MEX3CQ5U5Q3 659 aaKnown RBP20.87■□□□□ 0.93
SSR4-203ENST00000370086 SOCS7O14512 581 aa20.86■□□□□ 0.93
SSR4-203ENST00000370086 POTEAQ6S8J7 498 aa20.86■□□□□ 0.93
SSR4-203ENST00000370086 ANKARQ7Z5J8 1434 aa20.86■□□□□ 0.93
SSR4-203ENST00000370086 PHF8Q9UPP1 1060 aa20.85■□□□□ 0.93
SSR4-203ENST00000370086 TULP4Q9NRJ4 1543 aa20.84■□□□□ 0.93
SSR4-203ENST00000370086 WASLO00401 505 aaPredicted RBP20.84■□□□□ 0.93
SSR4-203ENST00000370086 PRR36Q9H6K5 1346 aa20.82■□□□□ 0.92
SSR4-203ENST00000370086 KRT28Q7Z3Y7 464 aa20.81■□□□□ 0.92
SSR4-203ENST00000370086 QRICH2Q9H0J4 1663 aa20.8■□□□□ 0.92
SSR4-203ENST00000370086 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
SSR4-203ENST00000370086 ITSN1Q15811 1721 aa20.8■□□□□ 0.92
SSR4-203ENST00000370086 EIF3AQ14152 1382 aaKnown RBP20.8■□□□□ 0.92
SSR4-203ENST00000370086 MARF1Q9Y4F3 1742 aaKnown RBP20.79■□□□□ 0.92
SSR4-203ENST00000370086 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
SSR4-203ENST00000370086 SPATA31A3Q5VYP0 1347 aa20.78■□□□□ 0.92
SSR4-203ENST00000370086 ATP7BP35670 1465 aa20.77■□□□□ 0.92
SSR4-203ENST00000370086 ADAMTS2O95450 1211 aa20.77■□□□□ 0.92
SSR4-203ENST00000370086 TRPM3Q9HCF6 1732 aaPredicted RBP20.77■□□□□ 0.92
SSR4-203ENST00000370086 C8orf37Q96NL8 207 aa20.76■□□□□ 0.91
SSR4-203ENST00000370086 CDK19Q9BWU1 502 aa20.76■□□□□ 0.91
SSR4-203ENST00000370086 TOPAZ1Q8N9V7 1692 aa20.76■□□□□ 0.91
SSR4-203ENST00000370086 AFF2P51816 1311 aa20.76■□□□□ 0.91
SSR4-203ENST00000370086 CENPJQ9HC77 1338 aaPredicted RBP20.76■□□□□ 0.91
SSR4-203ENST00000370086 ROCK2O75116 1388 aaKnown RBP20.75■□□□□ 0.91
SSR4-203ENST00000370086 TONSLQ96HA7 1378 aa20.75■□□□□ 0.91
SSR4-203ENST00000370086 PSME1Q06323 249 aa20.75■□□□□ 0.91
SSR4-203ENST00000370086 ZNF772Q68DY9 489 aaPredicted RBP20.75■□□□□ 0.91
SSR4-203ENST00000370086 NUDT16Q96DE0 195 aaKnown RBP20.75■□□□□ 0.91
SSR4-203ENST00000370086 TNS3Q68CZ2 1445 aa20.74■□□□□ 0.91
SSR4-203ENST00000370086 SBNO1A3KN83 1393 aa20.73■□□□□ 0.91
SSR4-203ENST00000370086 ALS2Q96Q42 1657 aa20.72■□□□□ 0.91
SSR4-203ENST00000370086 ABCA3Q99758 1704 aa20.72■□□□□ 0.91
SSR4-203ENST00000370086 NGLY1Q96IV0 654 aa20.71■□□□□ 0.91
SSR4-203ENST00000370086 PCGF6Q9BYE7 350 aa20.71■□□□□ 0.91
SSR4-203ENST00000370086 GPRASP1Q5JY77 1395 aa20.7■□□□□ 0.9
SSR4-203ENST00000370086 NGDNQ8NEJ9 315 aaKnown RBP20.69■□□□□ 0.9
SSR4-203ENST00000370086 RALGAPBQ86X10 1494 aa20.68■□□□□ 0.9
SSR4-203ENST00000370086 LMOD2Q6P5Q4 547 aa20.67■□□□□ 0.9
SSR4-203ENST00000370086 CABLES1Q8TDN4 633 aa20.67■□□□□ 0.9
SSR4-203ENST00000370086 CCDC61Q9Y6R9 512 aa20.67■□□□□ 0.9
SSR4-203ENST00000370086 SRPK2P78362 688 aaKnown RBP20.66■□□□□ 0.9
SSR4-203ENST00000370086 CABP2Q9NPB3 220 aa20.66■□□□□ 0.9
SSR4-203ENST00000370086 ARHGEF10O15013 1369 aa20.66■□□□□ 0.9
SSR4-203ENST00000370086 CRYBG1Q9Y4K1 1723 aa20.65■□□□□ 0.9
SSR4-203ENST00000370086 POLR3AO14802 1390 aaPredicted RBP20.65■□□□□ 0.9
SSR4-203ENST00000370086 PLEKHG5O94827 1062 aa20.65■□□□□ 0.9
SSR4-203ENST00000370086 FNBP4Q8N3X1 1017 aaPredicted RBP20.65■□□□□ 0.9
SSR4-203ENST00000370086 QTRT2Q9H974 415 aaKnown RBP20.65■□□□□ 0.9
SSR4-203ENST00000370086 ACEP12821 1306 aa20.64■□□□□ 0.89
SSR4-203ENST00000370086 PLEKHG3A1L390 1219 aa20.64■□□□□ 0.89
SSR4-203ENST00000370086 RXRBP28702 533 aa20.64■□□□□ 0.89
SSR4-203ENST00000370086 CARD11Q9BXL7 1154 aa20.64■□□□□ 0.89
SSR4-203ENST00000370086 USP21Q9UK80 565 aa20.64■□□□□ 0.89
SSR4-203ENST00000370086 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
SSR4-203ENST00000370086 EVC2Q86UK5 1308 aa20.61■□□□□ 0.89
SSR4-203ENST00000370086 PAK3O75914 559 aaPredicted RBP20.61■□□□□ 0.89
SSR4-203ENST00000370086 BCL9LQ86UU0 1499 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms