RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 CCDC146Q8IYE0 955 aa9.87□□□□□ -0.83
CD46-207ENST00000367041 KNSTRNQ9Y448 316 aa9.87□□□□□ -0.83
CD46-207ENST00000367041 PLB1Q6P1J6 1458 aa9.87□□□□□ -0.83
CD46-207ENST00000367041 RLBP1P12271 317 aa9.87□□□□□ -0.83
CD46-207ENST00000367041 CLEC17AQ6ZS10 378 aa9.87□□□□□ -0.83
CD46-207ENST00000367041 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
CD46-207ENST00000367041 KANK1Q14678 1352 aa9.86□□□□□ -0.83
CD46-207ENST00000367041 RARSP54136 660 aaKnown RBP9.86□□□□□ -0.83
CD46-207ENST00000367041 RAB3GAP1Q15042 981 aa9.86□□□□□ -0.83
CD46-207ENST00000367041 ZSCAN30Q86W11 494 aa9.86□□□□□ -0.83
CD46-207ENST00000367041 RBM25P49756 843 aaKnown RBP9.86□□□□□ -0.83
CD46-207ENST00000367041 SPRYD3Q8NCJ5 442 aa9.86□□□□□ -0.83
CD46-207ENST00000367041 TNPO1Q92973 898 aaKnown RBP9.86□□□□□ -0.83
CD46-207ENST00000367041 TRIM44Q96DX7 344 aaPredicted RBP9.86□□□□□ -0.83
CD46-207ENST00000367041 SKOR2Q2VWA4 1001 aaPredicted RBP9.85□□□□□ -0.83
CD46-207ENST00000367041 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
CD46-207ENST00000367041 SAMD9LQ8IVG5 1584 aa9.85□□□□□ -0.83
CD46-207ENST00000367041 SPHKAPQ2M3C7 1700 aa9.85□□□□□ -0.83
CD46-207ENST00000367041 MAP7D2Q96T17 732 aa9.85□□□□□ -0.83
CD46-207ENST00000367041 KDM5AP29375 1690 aaKnown RBP9.85□□□□□ -0.83
CD46-207ENST00000367041 JPH4Q96JJ6 628 aa9.85□□□□□ -0.83
CD46-207ENST00000367041 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
CD46-207ENST00000367041 DUOX2Q9NRD8 1548 aa9.84□□□□□ -0.83
CD46-207ENST00000367041 HS1BP3Q53T59 392 aa9.84□□□□□ -0.83
CD46-207ENST00000367041 PTMSP20962 102 aa9.84□□□□□ -0.83
CD46-207ENST00000367041 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.83□□□□□ -0.84
CD46-207ENST00000367041 RWDD1Q9H446 243 aaPredicted RBP9.83□□□□□ -0.84
CD46-207ENST00000367041 POLR3AO14802 1390 aaPredicted RBP9.83□□□□□ -0.84
CD46-207ENST00000367041 CDC42BPBQ9Y5S2 1711 aa9.83□□□□□ -0.84
CD46-207ENST00000367041 ZNF500O60304 480 aaPredicted RBP9.83□□□□□ -0.84
CD46-207ENST00000367041 TNNQ9UQP3 1299 aa9.83□□□□□ -0.84
CD46-207ENST00000367041 TTC37Q6PGP7 1564 aa9.83□□□□□ -0.84
CD46-207ENST00000367041 KIAA1210Q9ULL0 1709 aa9.83□□□□□ -0.84
CD46-207ENST00000367041 SMAP1Q8IYB5 467 aaPredicted RBP9.83□□□□□ -0.84
CD46-207ENST00000367041 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.83□□□□□ -0.84
CD46-207ENST00000367041 PREX2Q70Z35 1606 aa9.82□□□□□ -0.84
CD46-207ENST00000367041 SCAF11Q99590 1463 aaKnown RBP9.82□□□□□ -0.84
CD46-207ENST00000367041 PLEKHG5O94827 1062 aa9.82□□□□□ -0.84
CD46-207ENST00000367041 HSCBQ8IWL3 235 aa9.82□□□□□ -0.84
CD46-207ENST00000367041 PDLIM2Q96JY6 352 aa9.81□□□□□ -0.84
CD46-207ENST00000367041 KIF2CQ99661 725 aa9.81□□□□□ -0.84
CD46-207ENST00000367041 ERCC6L2Q5T890 1561 aa9.81□□□□□ -0.84
CD46-207ENST00000367041 HDAC1Q13547 482 aaPredicted RBP9.81□□□□□ -0.84
CD46-207ENST00000367041 RGL3Q3MIN7 710 aa9.81□□□□□ -0.84
CD46-207ENST00000367041 GBP4Q96PP9 640 aa9.81□□□□□ -0.84
CD46-207ENST00000367041 TSPY4P0CV99 314 aa9.8□□□□□ -0.84
CD46-207ENST00000367041 TSPY10P0CW01 314 aa9.8□□□□□ -0.84
CD46-207ENST00000367041 MFAP1P55081 439 aaKnown RBP9.8□□□□□ -0.84
CD46-207ENST00000367041 NCBP3Q53F19 620 aaKnown RBP9.8□□□□□ -0.84
CD46-207ENST00000367041 NOL7Q9UMY1 257 aaKnown RBP9.8□□□□□ -0.84
CD46-207ENST00000367041 CARMIL2Q6F5E8 1435 aa9.8□□□□□ -0.84
CD46-207ENST00000367041 NASPP49321 788 aaPredicted RBP9.8□□□□□ -0.84
CD46-207ENST00000367041 RBM10P98175 930 aaKnown RBP9.8□□□□□ -0.84
CD46-207ENST00000367041 MVPQ14764 893 aaKnown RBP9.8□□□□□ -0.84
CD46-207ENST00000367041 CDCA8Q53HL2 280 aa9.8□□□□□ -0.84
CD46-207ENST00000367041 ZNF445P59923 1031 aa9.8□□□□□ -0.84
CD46-207ENST00000367041 KLHL40Q2TBA0 621 aa9.79□□□□□ -0.84
CD46-207ENST00000367041 WDR63Q8IWG1 891 aa9.79□□□□□ -0.84
CD46-207ENST00000367041 ATP10BO94823 1461 aa9.79□□□□□ -0.84
CD46-207ENST00000367041 ADGRB2O60241 1585 aa9.79□□□□□ -0.84
CD46-207ENST00000367041 CANXP27824 592 aaKnown RBP9.79□□□□□ -0.84
CD46-207ENST00000367041 CCDC27Q2M243 656 aa9.79□□□□□ -0.84
CD46-207ENST00000367041 CFAP74Q9C0B2 1584 aa9.79□□□□□ -0.84
CD46-207ENST00000367041 TRHP20396 242 aaPredicted RBP9.78□□□□□ -0.84
CD46-207ENST00000367041 MTERF4Q7Z6M4 381 aaKnown RBP9.78□□□□□ -0.84
CD46-207ENST00000367041 ERVK-7P63135 1459 aa9.78□□□□□ -0.84
CD46-207ENST00000367041 MYO3AQ8NEV4 1616 aa9.78□□□□□ -0.84
CD46-207ENST00000367041 HNRNPMP52272 730 aaKnown RBP eCLIP9.77□□□□□ -0.859e-8■■■■■ 28.4
CD46-207ENST00000367041 UTP14CQ5TAP6 766 aaKnown RBP9.77□□□□□ -0.85
CD46-207ENST00000367041 UHRF1BP1LA0JNW5 1464 aa9.77□□□□□ -0.85
CD46-207ENST00000367041 DYNC1I1O14576 645 aa9.77□□□□□ -0.85
CD46-207ENST00000367041 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.85
CD46-207ENST00000367041 NEURL4Q96JN8 1562 aa9.77□□□□□ -0.85
CD46-207ENST00000367041 CLTCL1P53675 1640 aa9.77□□□□□ -0.85
CD46-207ENST00000367041 USP32Q8NFA0 1604 aa9.77□□□□□ -0.85
CD46-207ENST00000367041 CD2BP2O95400 341 aaKnown RBP9.76□□□□□ -0.85
CD46-207ENST00000367041 MSNP26038 577 aaKnown RBP9.76□□□□□ -0.85
CD46-207ENST00000367041 RSPH4AQ5TD94 716 aa9.76□□□□□ -0.85
CD46-207ENST00000367041 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
CD46-207ENST00000367041 TRPM2O94759 1503 aa9.75□□□□□ -0.85
CD46-207ENST00000367041 ADGRL1O94910 1474 aa9.75□□□□□ -0.85
CD46-207ENST00000367041 MCM5P33992 734 aa9.75□□□□□ -0.85
CD46-207ENST00000367041 RUNDC1Q96C34 613 aa9.75□□□□□ -0.85
CD46-207ENST00000367041 R3HCC1Q9Y3T6 440 aaKnown RBP9.75□□□□□ -0.85
CD46-207ENST00000367041 KIF13AQ9H1H9 1805 aa9.75□□□□□ -0.85
CD46-207ENST00000367041 SYCP2Q9BX26 1530 aa9.74□□□□□ -0.85
CD46-207ENST00000367041 REREQ9P2R6 1566 aa9.74□□□□□ -0.85
CD46-207ENST00000367041 PPRC1Q5VV67 1664 aaKnown RBP9.74□□□□□ -0.85
CD46-207ENST00000367041 UQCRHLA0A096LP55 91 aa9.74□□□□□ -0.85
CD46-207ENST00000367041 CYP2E1P05181 493 aaPredicted RBP9.74□□□□□ -0.85
CD46-207ENST00000367041 UQCRHP07919 91 aa9.74□□□□□ -0.85
CD46-207ENST00000367041 DMTNQ08495 405 aa9.74□□□□□ -0.85
CD46-207ENST00000367041 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
CD46-207ENST00000367041 FAM13BQ9NYF5 915 aa9.74□□□□□ -0.85
CD46-207ENST00000367041 BAG4O95429 457 aaKnown RBP9.74□□□□□ -0.85
CD46-207ENST00000367041 ZKSCAN5Q9Y2L8 839 aa9.74□□□□□ -0.85
CD46-207ENST00000367041 ZNF518AQ6AHZ1 1483 aa9.74□□□□□ -0.85
CD46-207ENST00000367041 K7ELQ4 463 aaPredicted RBP9.73□□□□□ -0.85
CD46-207ENST00000367041 CT47B1P0C2W7 299 aaPredicted RBP9.73□□□□□ -0.85
CD46-207ENST00000367041 SSFA2P28290 1259 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms