RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 DISP3Q9P2K9 1392 aa28.71■■■□□ 2.19
H3F3A-204ENST00000366816 NBPF1Q3BBV0 1214 aa28.69■■■□□ 2.18
H3F3A-204ENST00000366816 POGKQ9P215 609 aa28.67■■■□□ 2.18
H3F3A-204ENST00000366816 NUTM2FA1L443 756 aa28.65■■■□□ 2.18
H3F3A-204ENST00000366816 C1orf167Q5SNV9 1468 aa28.65■■■□□ 2.18
H3F3A-204ENST00000366816 ORAI2Q96SN7 254 aa28.64■■■□□ 2.18
H3F3A-204ENST00000366816 DDX17Q92841 729 aaKnown RBP28.63■■■□□ 2.17
H3F3A-204ENST00000366816 DLC1Q96QB1 1528 aa28.63■■■□□ 2.17
H3F3A-204ENST00000366816 PHLPP1O60346 1717 aa28.61■■■□□ 2.17
H3F3A-204ENST00000366816 CDC42BPGQ6DT37 1551 aa28.6■■■□□ 2.17
H3F3A-204ENST00000366816 KIAA1210Q9ULL0 1709 aa28.58■■■□□ 2.17
H3F3A-204ENST00000366816 HIRIP3Q9BW71 556 aaPredicted RBP28.58■■■□□ 2.17
H3F3A-204ENST00000366816 TONSLQ96HA7 1378 aa28.58■■■□□ 2.17
H3F3A-204ENST00000366816 NBPF8Q3BBV2 869 aa28.57■■■□□ 2.16
H3F3A-204ENST00000366816 MINK1Q8N4C8 1332 aaPredicted RBP28.57■■■□□ 2.16
H3F3A-204ENST00000366816 ESCO1Q5FWF5 840 aa28.56■■■□□ 2.16
H3F3A-204ENST00000366816 AHDC1Q5TGY3 1603 aaPredicted RBP28.54■■■□□ 2.16
H3F3A-204ENST00000366816 COL16A1Q07092 1604 aaPredicted RBP28.54■■■□□ 2.16
H3F3A-204ENST00000366816 ARHGEF28Q8N1W1 1705 aaKnown RBP28.51■■■□□ 2.15
H3F3A-204ENST00000366816 FMN2Q9NZ56 1722 aa28.5■■■□□ 2.15
H3F3A-204ENST00000366816 TRPM1Q7Z4N2 1603 aa28.48■■■□□ 2.15
H3F3A-204ENST00000366816 MED1Q15648 1581 aaPredicted RBP28.48■■■□□ 2.15
H3F3A-204ENST00000366816 JCADQ9P266 1359 aa28.48■■■□□ 2.15
H3F3A-204ENST00000366816 NHSL1Q5SYE7 1610 aa28.47■■■□□ 2.15
H3F3A-204ENST00000366816 ROCK2O75116 1388 aaKnown RBP28.47■■■□□ 2.15
H3F3A-204ENST00000366816 FOXO3O43524 673 aa28.46■■■□□ 2.15
H3F3A-204ENST00000366816 ILDR2Q71H61 639 aa28.46■■■□□ 2.15
H3F3A-204ENST00000366816 WASLO00401 505 aaPredicted RBP28.44■■■□□ 2.14
H3F3A-204ENST00000366816 XPCQ01831 940 aaPredicted RBP28.44■■■□□ 2.14
H3F3A-204ENST00000366816 ADGRB2O60241 1585 aa28.43■■■□□ 2.14
H3F3A-204ENST00000366816 LRRC59Q96AG4 307 aaKnown RBP28.43■■■□□ 2.14
H3F3A-204ENST00000366816 CCER1Q8TC90 406 aaPredicted RBP28.42■■■□□ 2.14
H3F3A-204ENST00000366816 RGPD8O14715 1765 aaPredicted RBP28.42■■■□□ 2.14
H3F3A-204ENST00000366816 SOS2Q07890 1332 aaPredicted RBP28.41■■■□□ 2.14
H3F3A-204ENST00000366816 PHF8Q9UPP1 1060 aa28.4■■■□□ 2.14
H3F3A-204ENST00000366816 PRR36Q9H6K5 1346 aa28.4■■■□□ 2.14
H3F3A-204ENST00000366816 CENPJQ9HC77 1338 aaPredicted RBP28.4■■■□□ 2.14
H3F3A-204ENST00000366816 NPHP3Q7Z494 1330 aa28.39■■■□□ 2.13
H3F3A-204ENST00000366816 PMFBP1Q8TBY8 1022 aa28.38■■■□□ 2.13
H3F3A-204ENST00000366816 CDK19Q9BWU1 502 aa28.38■■■□□ 2.13
H3F3A-204ENST00000366816 USP32Q8NFA0 1604 aa28.38■■■□□ 2.13
H3F3A-204ENST00000366816 CLSPNQ9HAW4 1339 aa28.37■■■□□ 2.13
H3F3A-204ENST00000366816 CARD11Q9BXL7 1154 aa28.36■■■□□ 2.13
H3F3A-204ENST00000366816 ANKARQ7Z5J8 1434 aa28.35■■■□□ 2.13
H3F3A-204ENST00000366816 NUTM2BA6NNL0 878 aaPredicted RBP28.35■■■□□ 2.13
H3F3A-204ENST00000366816 NUTM2EB1AL46 878 aaPredicted RBP28.35■■■□□ 2.13
H3F3A-204ENST00000366816 NUTM2AQ8IVF1 878 aaPredicted RBP28.35■■■□□ 2.13
H3F3A-204ENST00000366816 PHF23Q9BUL5 403 aaPredicted RBP28.35■■■□□ 2.13
H3F3A-204ENST00000366816 GPRASP1Q5JY77 1395 aa28.35■■■□□ 2.13
H3F3A-204ENST00000366816 SPATA31A6Q5VVP1 1343 aa28.34■■■□□ 2.13
H3F3A-204ENST00000366816 PNPLA6Q8IY17 1366 aa28.34■■■□□ 2.13
H3F3A-204ENST00000366816 PXDNQ92626 1479 aa28.34■■■□□ 2.13
H3F3A-204ENST00000366816 TULP4Q9NRJ4 1543 aa28.33■■■□□ 2.13
H3F3A-204ENST00000366816 SHPRHQ149N8 1683 aa28.33■■■□□ 2.13
H3F3A-204ENST00000366816 NUDT16Q96DE0 195 aaKnown RBP28.33■■■□□ 2.13
H3F3A-204ENST00000366816 KRT28Q7Z3Y7 464 aa28.32■■■□□ 2.12
H3F3A-204ENST00000366816 EIF3AQ14152 1382 aaKnown RBP28.32■■■□□ 2.12
H3F3A-204ENST00000366816 RALGAPBQ86X10 1494 aa28.32■■■□□ 2.12
H3F3A-204ENST00000366816 LRP6O75581 1613 aa28.31■■■□□ 2.12
H3F3A-204ENST00000366816 KIF1AQ12756 1690 aa28.3■■■□□ 2.12
H3F3A-204ENST00000366816 QRICH2Q9H0J4 1663 aa28.29■■■□□ 2.12
H3F3A-204ENST00000366816 PSME1Q06323 249 aa28.29■■■□□ 2.12
H3F3A-204ENST00000366816 CABP2Q9NPB3 220 aa28.28■■■□□ 2.12
H3F3A-204ENST00000366816 SRPK2P78362 688 aaKnown RBP28.27■■■□□ 2.12
H3F3A-204ENST00000366816 RGS17Q9UGC6 210 aaPredicted RBP28.27■■■□□ 2.12
H3F3A-204ENST00000366816 ATP7BP35670 1465 aa28.27■■■□□ 2.12
H3F3A-204ENST00000366816 MEX3CQ5U5Q3 659 aaKnown RBP28.26■■■□□ 2.11
H3F3A-204ENST00000366816 TIMELESSQ9UNS1 1208 aa28.25■■■□□ 2.11
H3F3A-204ENST00000366816 NGDNQ8NEJ9 315 aaKnown RBP28.24■■■□□ 2.11
H3F3A-204ENST00000366816 SPATA31A3Q5VYP0 1347 aa28.23■■■□□ 2.11
H3F3A-204ENST00000366816 CCDC61Q9Y6R9 512 aa28.22■■■□□ 2.11
H3F3A-204ENST00000366816 SOCS7O14512 581 aa28.2■■■□□ 2.1
H3F3A-204ENST00000366816 PLEKHG5O94827 1062 aa28.2■■■□□ 2.1
H3F3A-204ENST00000366816 ADAMTS2O95450 1211 aa28.2■■■□□ 2.1
H3F3A-204ENST00000366816 LMOD2Q6P5Q4 547 aa28.2■■■□□ 2.1
H3F3A-204ENST00000366816 EVC2Q86UK5 1308 aa28.19■■■□□ 2.1
H3F3A-204ENST00000366816 ITSN1Q15811 1721 aa28.16■■■□□ 2.1
H3F3A-204ENST00000366816 ACEP12821 1306 aa28.16■■■□□ 2.1
H3F3A-204ENST00000366816 SBNO1A3KN83 1393 aa28.15■■■□□ 2.1
H3F3A-204ENST00000366816 PLEKHG3A1L390 1219 aa28.15■■■□□ 2.1
H3F3A-204ENST00000366816 C8orf37Q96NL8 207 aa28.15■■■□□ 2.1
H3F3A-204ENST00000366816 TNS3Q68CZ2 1445 aa28.15■■■□□ 2.1
H3F3A-204ENST00000366816 TOPAZ1Q8N9V7 1692 aa28.14■■■□□ 2.1
H3F3A-204ENST00000366816 POTEAQ6S8J7 498 aa28.14■■■□□ 2.1
H3F3A-204ENST00000366816 CABP1Q9NZU7 370 aa28.14■■■□□ 2.1
H3F3A-204ENST00000366816 PPIP5K1Q6PFW1 1433 aa28.14■■■□□ 2.1
H3F3A-204ENST00000366816 COL22A1Q8NFW1 1626 aaPredicted RBP28.14■■■□□ 2.09
H3F3A-204ENST00000366816 ST20-MTHFSA0A0A6YYL1 179 aa28.13■■■□□ 2.09
H3F3A-204ENST00000366816 PAK3O75914 559 aaPredicted RBP28.13■■■□□ 2.09
H3F3A-204ENST00000366816 CABLES1Q8TDN4 633 aa28.13■■■□□ 2.09
H3F3A-204ENST00000366816 POLR3AO14802 1390 aaPredicted RBP28.11■■■□□ 2.09
H3F3A-204ENST00000366816 SBNO2Q9Y2G9 1366 aa28.1■■■□□ 2.09
H3F3A-204ENST00000366816 TRPM3Q9HCF6 1732 aaPredicted RBP28.09■■■□□ 2.09
H3F3A-204ENST00000366816 NGLY1Q96IV0 654 aa28.09■■■□□ 2.09
H3F3A-204ENST00000366816 AFF2P51816 1311 aa28.09■■■□□ 2.09
H3F3A-204ENST00000366816 TESK2Q96S53 571 aa28.07■■■□□ 2.08
H3F3A-204ENST00000366816 ARHGEF10O15013 1369 aa28.07■■■□□ 2.08
H3F3A-204ENST00000366816 USP47Q96K76 1375 aa28.06■■■□□ 2.08
H3F3A-204ENST00000366816 HAP1P54257 671 aaPredicted RBP28.05■■■□□ 2.08
H3F3A-204ENST00000366816 ZNF772Q68DY9 489 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms