RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 LOC100996750A0A140TA64 210 aa8.65□□□□□ -1.02
RNU6-839P-201ENST00000363347 AMHR2Q16671 573 aa8.65□□□□□ -1.02
RNU6-839P-201ENST00000363347 PARP9Q8IXQ6 854 aa8.65□□□□□ -1.02
RNU6-839P-201ENST00000363347 KRTAP4-6Q9BYQ5 205 aa8.65□□□□□ -1.02
RNU6-839P-201ENST00000363347 TMEM134Q9H6X4 195 aa8.65□□□□□ -1.02
RNU6-839P-201ENST00000363347 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
RNU6-839P-201ENST00000363347 CYP4X1Q8N118 509 aa8.64□□□□□ -1.03
RNU6-839P-201ENST00000363347 TTLL12Q14166 644 aaPredicted RBP8.63□□□□□ -1.03
RNU6-839P-201ENST00000363347 FAM117AQ9C073 453 aa8.63□□□□□ -1.03
RNU6-839P-201ENST00000363347 RPIAP49247 311 aa8.62□□□□□ -1.03
RNU6-839P-201ENST00000363347 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
RNU6-839P-201ENST00000363347 RBM46Q8TBY0 533 aaKnown RBP8.61□□□□□ -1.03
RNU6-839P-201ENST00000363347 TERTO14746 1132 aaKnown RBP8.59□□□□□ -1.03
RNU6-839P-201ENST00000363347 SCUBE3Q8IX30 993 aa8.59□□□□□ -1.03
RNU6-839P-201ENST00000363347 DDRGK1Q96HY6 314 aa8.59□□□□□ -1.03
RNU6-839P-201ENST00000363347 PLEKHG3A1L390 1219 aa8.58□□□□□ -1.04
RNU6-839P-201ENST00000363347 CD2BP2O95400 341 aaKnown RBP8.58□□□□□ -1.04
RNU6-839P-201ENST00000363347 SPSB2Q99619 263 aa8.58□□□□□ -1.04
RNU6-839P-201ENST00000363347 RCCD1A6NED2 376 aa8.57□□□□□ -1.04
RNU6-839P-201ENST00000363347 FAM181BA6NEQ2 426 aa8.57□□□□□ -1.04
RNU6-839P-201ENST00000363347 SLC10A3P09131 477 aa8.57□□□□□ -1.04
RNU6-839P-201ENST00000363347 SNRPBP14678 240 aaKnown RBP8.57□□□□□ -1.04
RNU6-839P-201ENST00000363347 GIGYF2Q6Y7W6 1299 aaKnown RBP8.57□□□□□ -1.04
RNU6-839P-201ENST00000363347 ATP13A2Q9NQ11 1180 aa8.57□□□□□ -1.04
RNU6-839P-201ENST00000363347 ADGRG1Q9Y653 693 aa8.57□□□□□ -1.04
RNU6-839P-201ENST00000363347 FCF1Q9Y324 198 aaKnown RBP8.56□□□□□ -1.04
RNU6-839P-201ENST00000363347 TTC24A2A3L6 582 aaPredicted RBP8.55□□□□□ -1.04
RNU6-839P-201ENST00000363347 TRIM47Q96LD4 638 aa8.55□□□□□ -1.04
RNU6-839P-201ENST00000363347 MS4A1P11836 297 aa8.54□□□□□ -1.04
RNU6-839P-201ENST00000363347 PUS10Q3MIT2 529 aaKnown RBP8.54□□□□□ -1.04
RNU6-839P-201ENST00000363347 REPIN1Q9BWE0 567 aaKnown RBP8.54□□□□□ -1.04
RNU6-839P-201ENST00000363347 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
RNU6-839P-201ENST00000363347 CLCN1P35523 988 aa8.53□□□□□ -1.04
RNU6-839P-201ENST00000363347 MDM2Q00987 491 aaPredicted RBP8.53□□□□□ -1.04
RNU6-839P-201ENST00000363347 FAM161AQ3B820 660 aa8.53□□□□□ -1.04
RNU6-839P-201ENST00000363347 PHOX2BQ99453 314 aa8.52□□□□□ -1.05
RNU6-839P-201ENST00000363347 GPCPD1Q9NPB8 672 aa8.51□□□□□ -1.05
RNU6-839P-201ENST00000363347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.5□□□□□ -1.05
RNU6-839P-201ENST00000363347 SMPD1P17405 629 aa8.5□□□□□ -1.05
RNU6-839P-201ENST00000363347 NLRP7Q8WX94 980 aa8.5□□□□□ -1.05
RNU6-839P-201ENST00000363347 METTL3Q86U44 580 aaKnown RBP8.49□□□□□ -1.05
RNU6-839P-201ENST00000363347 KIFC2Q96AC6 838 aa8.49□□□□□ -1.05
RNU6-839P-201ENST00000363347 OATP04181 439 aa8.48□□□□□ -1.05
RNU6-839P-201ENST00000363347 SNIP1Q8TAD8 396 aaKnown RBP8.48□□□□□ -1.05
RNU6-839P-201ENST00000363347 ZBTB24O43167 697 aaPredicted RBP8.47□□□□□ -1.05
RNU6-839P-201ENST00000363347 RSPH4AQ5TD94 716 aa8.47□□□□□ -1.05
RNU6-839P-201ENST00000363347 PXYLP1Q8TE99 480 aa8.47□□□□□ -1.05
RNU6-839P-201ENST00000363347 SLC16A10Q8TF71 515 aa8.47□□□□□ -1.05
RNU6-839P-201ENST00000363347 SUPT5HO00267 1087 aaKnown RBP8.46□□□□□ -1.06
RNU6-839P-201ENST00000363347 WNT7AO00755 349 aa8.46□□□□□ -1.06
RNU6-839P-201ENST00000363347 ZSCAN1Q8NBB4 408 aa8.46□□□□□ -1.06
RNU6-839P-201ENST00000363347 THAP11Q96EK4 314 aa8.46□□□□□ -1.06
RNU6-839P-201ENST00000363347 GOPCQ9HD26 462 aa8.46□□□□□ -1.06
RNU6-839P-201ENST00000363347 SSTR3P32745 418 aaPredicted RBP8.45□□□□□ -1.06
RNU6-839P-201ENST00000363347 PCMTD1Q96MG8 357 aaPredicted RBP8.45□□□□□ -1.06
RNU6-839P-201ENST00000363347 MORN1Q5T089 497 aa8.44□□□□□ -1.06
RNU6-839P-201ENST00000363347 FAM160A2Q8N612 972 aaPredicted RBP8.44□□□□□ -1.06
RNU6-839P-201ENST00000363347 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
RNU6-839P-201ENST00000363347 FAM217BQ9NTX9 383 aaPredicted RBP8.44□□□□□ -1.06
RNU6-839P-201ENST00000363347 J3QL48 77 aa8.43□□□□□ -1.06
RNU6-839P-201ENST00000363347 FMNL1O95466 1100 aaPredicted RBP8.43□□□□□ -1.06
RNU6-839P-201ENST00000363347 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
RNU6-839P-201ENST00000363347 GMPRP36959 345 aa8.43□□□□□ -1.06
RNU6-839P-201ENST00000363347 SH3D19Q5HYK7 790 aa8.43□□□□□ -1.06
RNU6-839P-201ENST00000363347 BEGAINQ9BUH8 593 aa8.43□□□□□ -1.06
RNU6-839P-201ENST00000363347 MRGPRX2Q96LB1 330 aa8.42□□□□□ -1.06
RNU6-839P-201ENST00000363347 NXF1Q9UBU9 619 aaKnown RBP8.42□□□□□ -1.06
RNU6-839P-201ENST00000363347 SUZ12Q15022 739 aaKnown RBP8.41□□□□□ -1.06
RNU6-839P-201ENST00000363347 HPS1Q92902 700 aa8.41□□□□□ -1.06
RNU6-839P-201ENST00000363347 FUT2Q10981 343 aa8.4□□□□□ -1.06
RNU6-839P-201ENST00000363347 TRIM32Q13049 653 aa8.4□□□□□ -1.06
RNU6-839P-201ENST00000363347 IRF7Q92985 503 aa8.4□□□□□ -1.06
RNU6-839P-201ENST00000363347 NPAS3Q8IXF0 933 aa8.39□□□□□ -1.07
RNU6-839P-201ENST00000363347 ZMYND15Q9H091 742 aa8.39□□□□□ -1.07
RNU6-839P-201ENST00000363347 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
RNU6-839P-201ENST00000363347 SLC27A5Q9Y2P5 690 aa8.39□□□□□ -1.07
RNU6-839P-201ENST00000363347 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
RNU6-839P-201ENST00000363347 ATP6V1AP38606 617 aa8.38□□□□□ -1.07
RNU6-839P-201ENST00000363347 MSS51Q4VC12 460 aa8.38□□□□□ -1.07
RNU6-839P-201ENST00000363347 ATP1B4Q9UN42 357 aaPredicted RBP8.38□□□□□ -1.07
RNU6-839P-201ENST00000363347 FLIIQ13045 1269 aa8.37□□□□□ -1.07
RNU6-839P-201ENST00000363347 SKIV2LQ15477 1246 aaKnown RBP8.37□□□□□ -1.07
RNU6-839P-201ENST00000363347 RDH13Q8NBN7 331 aa8.37□□□□□ -1.07
RNU6-839P-201ENST00000363347 BRICD5Q6PL45 260 aa8.36□□□□□ -1.07
RNU6-839P-201ENST00000363347 ARXQ96QS3 562 aa8.36□□□□□ -1.07
RNU6-839P-201ENST00000363347 POLR3EQ9NVU0 708 aa8.36□□□□□ -1.07
RNU6-839P-201ENST00000363347 MYSM1Q5VVJ2 828 aa8.35□□□□□ -1.07
RNU6-839P-201ENST00000363347 PROCA1Q8NCQ7 364 aaPredicted RBP8.35□□□□□ -1.07
RNU6-839P-201ENST00000363347 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
RNU6-839P-201ENST00000363347 H3BM21 787 aa8.33□□□□□ -1.08
RNU6-839P-201ENST00000363347 CLK2P49760 499 aaKnown RBP8.33□□□□□ -1.08
RNU6-839P-201ENST00000363347 VEGFBP49765 207 aa8.33□□□□□ -1.08
RNU6-839P-201ENST00000363347 RNF19BQ6ZMZ0 732 aa8.32□□□□□ -1.08
RNU6-839P-201ENST00000363347 ERBB4Q15303 1308 aa8.31□□□□□ -1.08
RNU6-839P-201ENST00000363347 DDX11L8A8MPP1 907 aa8.31□□□□□ -1.08
RNU6-839P-201ENST00000363347 SULF1Q8IWU6 871 aa8.31□□□□□ -1.08
RNU6-839P-201ENST00000363347 CD46P15529 392 aa8.3□□□□□ -1.08
RNU6-839P-201ENST00000363347 GCGRP47871 477 aa8.3□□□□□ -1.08
RNU6-839P-201ENST00000363347 MMP16P51512 607 aa8.3□□□□□ -1.08
RNU6-839P-201ENST00000363347 MCM6Q14566 821 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms