RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
TOP1-201ENST00000361337 DUSP27Q5VZP5 1158 aa11.77□□□□□ -0.52
TOP1-201ENST00000361337 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.52
TOP1-201ENST00000361337 NRXN1Q9ULB1 1477 aa11.77□□□□□ -0.53
TOP1-201ENST00000361337 UBE2Q2Q8WVN8 375 aa11.76□□□□□ -0.53
TOP1-201ENST00000361337 COL17A1Q9UMD9 1497 aaPredicted RBP11.76□□□□□ -0.53
TOP1-201ENST00000361337 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
TOP1-201ENST00000361337 PLA2R1Q13018 1463 aa11.75□□□□□ -0.53
TOP1-201ENST00000361337 U2SURPO15042 1029 aaKnown RBP11.75□□□□□ -0.53
TOP1-201ENST00000361337 TRPM2O94759 1503 aa11.75□□□□□ -0.53
TOP1-201ENST00000361337 CCDC146Q8IYE0 955 aa11.75□□□□□ -0.53
TOP1-201ENST00000361337 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
TOP1-201ENST00000361337 A2MP01023 1474 aa11.75□□□□□ -0.53
TOP1-201ENST00000361337 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
TOP1-201ENST00000361337 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
TOP1-201ENST00000361337 A0A0G2JS52 829 aa11.74□□□□□ -0.53
TOP1-201ENST00000361337 CENPQQ7L2Z9 268 aaPredicted RBP11.74□□□□□ -0.53
TOP1-201ENST00000361337 TXNDC2Q86VQ3 553 aa11.74□□□□□ -0.53
TOP1-201ENST00000361337 ERBINQ96RT1 1412 aa11.74□□□□□ -0.53
TOP1-201ENST00000361337 ADGRF5Q8IZF2 1346 aa11.74□□□□□ -0.53
TOP1-201ENST00000361337 USP32Q8NFA0 1604 aa11.73□□□□□ -0.53
TOP1-201ENST00000361337 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
TOP1-201ENST00000361337 CLTCQ00610 1675 aaKnown RBP11.73□□□□□ -0.53
TOP1-201ENST00000361337 PPP2R1AP30153 589 aa11.73□□□□□ -0.53
TOP1-201ENST00000361337 BCAR3O75815 825 aa11.72□□□□□ -0.53
TOP1-201ENST00000361337 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
TOP1-201ENST00000361337 CDCA8Q53HL2 280 aa11.71□□□□□ -0.53
TOP1-201ENST00000361337 GZF1Q9H116 711 aaPredicted RBP11.71□□□□□ -0.53
TOP1-201ENST00000361337 DMRT2Q9Y5R5 561 aa11.71□□□□□ -0.53
TOP1-201ENST00000361337 ZNF521Q96K83 1311 aa11.71□□□□□ -0.53
TOP1-201ENST00000361337 HSP90AA2PQ14568 343 aaPredicted RBP11.71□□□□□ -0.53
TOP1-201ENST00000361337 SEC24BO95487 1268 aa11.71□□□□□ -0.54
TOP1-201ENST00000361337 MORC1Q86VD1 984 aa11.71□□□□□ -0.54
TOP1-201ENST00000361337 IGHDP01880 384 aa11.7□□□□□ -0.54
TOP1-201ENST00000361337 RTEL1-TNFRSF6BF6WH68 1400 aa11.7□□□□□ -0.54
TOP1-201ENST00000361337 NUTM2GQ5VZR2 741 aa11.7□□□□□ -0.54
TOP1-201ENST00000361337 WAPLQ7Z5K2 1190 aa11.7□□□□□ -0.54
TOP1-201ENST00000361337 SLC12A5Q9H2X9 1139 aa11.7□□□□□ -0.54
TOP1-201ENST00000361337 HSP90AA1P07900 732 aaKnown RBP11.7□□□□□ -0.54
TOP1-201ENST00000361337 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
TOP1-201ENST00000361337 CLTCL1P53675 1640 aa11.69□□□□□ -0.54
TOP1-201ENST00000361337 CAMSAP1Q5T5Y3 1602 aa11.69□□□□□ -0.54
TOP1-201ENST00000361337 SYNMO15061 1565 aa11.69□□□□□ -0.54
TOP1-201ENST00000361337 CANXP27824 592 aaKnown RBP11.69□□□□□ -0.54
TOP1-201ENST00000361337 HDGFP51858 240 aaKnown RBP11.69□□□□□ -0.54
TOP1-201ENST00000361337 SPRYD3Q8NCJ5 442 aa11.69□□□□□ -0.54
TOP1-201ENST00000361337 CFAP65Q6ZU64 1925 aaKnown RBP11.69□□□□□ -0.54
TOP1-201ENST00000361337 RIMS1Q86UR5 1692 aaKnown RBP11.68□□□□□ -0.54
TOP1-201ENST00000361337 USP19O94966 1318 aa11.68□□□□□ -0.54
TOP1-201ENST00000361337 SLFN5Q08AF3 891 aa11.68□□□□□ -0.54
TOP1-201ENST00000361337 PRAM1Q96QH2 718 aa11.68□□□□□ -0.54
TOP1-201ENST00000361337 APAF1O14727 1248 aa11.67□□□□□ -0.54
TOP1-201ENST00000361337 PNNQ9H307 717 aaKnown RBP11.67□□□□□ -0.54
TOP1-201ENST00000361337 DIP2BQ9P265 1576 aa11.67□□□□□ -0.54
TOP1-201ENST00000361337 PTPRTO14522 1441 aa11.67□□□□□ -0.54
TOP1-201ENST00000361337 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
TOP1-201ENST00000361337 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
TOP1-201ENST00000361337 INSRP06213 1382 aa11.66□□□□□ -0.54
TOP1-201ENST00000361337 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
TOP1-201ENST00000361337 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
TOP1-201ENST00000361337 LTV1Q96GA3 475 aaPredicted RBP11.66□□□□□ -0.54
TOP1-201ENST00000361337 KNDC1Q76NI1 1749 aa11.66□□□□□ -0.54
TOP1-201ENST00000361337 PMFBP1Q8TBY8 1022 aa11.65□□□□□ -0.54
TOP1-201ENST00000361337 GGNBP2Q9H3C7 697 aa11.65□□□□□ -0.54
TOP1-201ENST00000361337 RRP7AQ9Y3A4 280 aaKnown RBP11.65□□□□□ -0.54
TOP1-201ENST00000361337 NGDNQ8NEJ9 315 aaKnown RBP11.65□□□□□ -0.54
TOP1-201ENST00000361337 ANKRD26Q9UPS8 1709 aa11.65□□□□□ -0.54
TOP1-201ENST00000361337 SLKQ9H2G2 1235 aaPredicted RBP11.65□□□□□ -0.54
TOP1-201ENST00000361337 CENPJQ9HC77 1338 aaPredicted RBP11.64□□□□□ -0.55
TOP1-201ENST00000361337 DIP2CQ9Y2E4 1556 aa11.64□□□□□ -0.55
TOP1-201ENST00000361337 PANK1Q8TE04 598 aa11.64□□□□□ -0.55
TOP1-201ENST00000361337 TRIM44Q96DX7 344 aaPredicted RBP11.64□□□□□ -0.55
TOP1-201ENST00000361337 YEATS2Q9ULM3 1422 aa11.63□□□□□ -0.55
TOP1-201ENST00000361337 TRMT2AQ8IZ69 625 aaKnown RBP11.63□□□□□ -0.55
TOP1-201ENST00000361337 ADGRB3O60242 1522 aa11.63□□□□□ -0.55
TOP1-201ENST00000361337 ZMYND15Q9H091 742 aa11.63□□□□□ -0.55
TOP1-201ENST00000361337 RIMBP3CA6NJZ7 1639 aa11.63□□□□□ -0.55
TOP1-201ENST00000361337 RIMBP3BA6NNM3 1639 aa11.63□□□□□ -0.55
TOP1-201ENST00000361337 RIMBP3Q9UFD9 1639 aa11.63□□□□□ -0.55
TOP1-201ENST00000361337 U2AF1L5P0DN76 240 aaPredicted RBP11.62□□□□□ -0.55
TOP1-201ENST00000361337 U2AF1Q01081 240 aaKnown RBP eCLIP11.62□□□□□ -0.552e-15■■■■□ 21.7
TOP1-201ENST00000361337 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.62□□□□□ -0.55
TOP1-201ENST00000361337 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
TOP1-201ENST00000361337 FBLN1P23142 703 aa11.62□□□□□ -0.55
TOP1-201ENST00000361337 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
TOP1-201ENST00000361337 TNNQ9UQP3 1299 aa11.62□□□□□ -0.55
TOP1-201ENST00000361337 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
TOP1-201ENST00000361337 TMEM131LA2VDJ0 1609 aa11.62□□□□□ -0.55
TOP1-201ENST00000361337 KIF1BO60333 1816 aa11.61□□□□□ -0.55
TOP1-201ENST00000361337 HSPA2P54652 639 aa11.61□□□□□ -0.55
TOP1-201ENST00000361337 SLC52A1Q9NWF4 448 aa11.61□□□□□ -0.55
TOP1-201ENST00000361337 HDGFL2Q7Z4V5 671 aaPredicted RBP11.6□□□□□ -0.55
TOP1-201ENST00000361337 UGGT1Q9NYU2 1555 aa11.6□□□□□ -0.55
TOP1-201ENST00000361337 ATP7AQ04656 1500 aa11.6□□□□□ -0.55
TOP1-201ENST00000361337 EIF3AQ14152 1382 aaKnown RBP11.59□□□□□ -0.55
TOP1-201ENST00000361337 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
TOP1-201ENST00000361337 ARHGEF28Q8N1W1 1705 aaKnown RBP11.59□□□□□ -0.55
TOP1-201ENST00000361337 MYO5BQ9ULV0 1848 aa11.59□□□□□ -0.55
TOP1-201ENST00000361337 CABP1Q9NZU7 370 aa11.59□□□□□ -0.55
TOP1-201ENST00000361337 TSPOAP1O95153 1857 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms