RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 GRPEL1Q9HAV7 217 aa13.79□□□□□ -0.2
TMC3-201ENST00000359440 EXOSC9Q06265 439 aaKnown RBP13.79□□□□□ -0.2
TMC3-201ENST00000359440 HSP90AB4PQ58FF6 505 aa13.79□□□□□ -0.2
TMC3-201ENST00000359440 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
TMC3-201ENST00000359440 AMPHP49418 695 aa13.78□□□□□ -0.2
TMC3-201ENST00000359440 WWC1Q8IX03 1113 aa13.78□□□□□ -0.2
TMC3-201ENST00000359440 ZKSCAN1P17029 563 aaPredicted RBP13.78□□□□□ -0.2
TMC3-201ENST00000359440 MINK1Q8N4C8 1332 aaPredicted RBP13.78□□□□□ -0.2
TMC3-201ENST00000359440 KIF14Q15058 1648 aa13.78□□□□□ -0.2
TMC3-201ENST00000359440 SNAPC4Q5SXM2 1469 aa13.78□□□□□ -0.2
TMC3-201ENST00000359440 GNL2Q13823 731 aaKnown RBP13.78□□□□□ -0.2
TMC3-201ENST00000359440 DUSP27Q5VZP5 1158 aa13.78□□□□□ -0.2
TMC3-201ENST00000359440 GPRASP1Q5JY77 1395 aa13.77□□□□□ -0.2
TMC3-201ENST00000359440 ABCC11Q96J66 1382 aa13.77□□□□□ -0.2
TMC3-201ENST00000359440 K7ELQ4 463 aaPredicted RBP13.77□□□□□ -0.2
TMC3-201ENST00000359440 NOL8Q76FK4 1167 aaKnown RBP13.77□□□□□ -0.2
TMC3-201ENST00000359440 DHX29Q7Z478 1369 aaKnown RBP13.77□□□□□ -0.2
TMC3-201ENST00000359440 ANO8Q9HCE9 1232 aaPredicted RBP13.77□□□□□ -0.21
TMC3-201ENST00000359440 DIAPH3Q9NSV4 1193 aa13.77□□□□□ -0.21
TMC3-201ENST00000359440 GOLGA6L19H0YKK7 550 aa13.76□□□□□ -0.21
TMC3-201ENST00000359440 RRP9O43818 475 aaKnown RBP13.76□□□□□ -0.21
TMC3-201ENST00000359440 HMGN5P82970 282 aaKnown RBP13.76□□□□□ -0.21
TMC3-201ENST00000359440 ESPNB1AK53 854 aa13.76□□□□□ -0.21
TMC3-201ENST00000359440 NUP160Q12769 1436 aa13.76□□□□□ -0.21
TMC3-201ENST00000359440 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
TMC3-201ENST00000359440 CTTNBP2Q8WZ74 1663 aa13.76□□□□□ -0.21
TMC3-201ENST00000359440 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
TMC3-201ENST00000359440 INSRP06213 1382 aa13.75□□□□□ -0.21
TMC3-201ENST00000359440 FOXD4L5Q5VV16 416 aaPredicted RBP13.75□□□□□ -0.21
TMC3-201ENST00000359440 FOXD4L4Q8WXT5 416 aaPredicted RBP13.75□□□□□ -0.21
TMC3-201ENST00000359440 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
TMC3-201ENST00000359440 ARHGEF12Q9NZN5 1544 aa13.75□□□□□ -0.21
TMC3-201ENST00000359440 HSP90B1P14625 803 aaKnown RBP13.75□□□□□ -0.21
TMC3-201ENST00000359440 FAM13BQ9NYF5 915 aa13.74□□□□□ -0.21
TMC3-201ENST00000359440 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
TMC3-201ENST00000359440 LMOD2Q6P5Q4 547 aa13.74□□□□□ -0.21
TMC3-201ENST00000359440 GGNBP2Q9H3C7 697 aa13.74□□□□□ -0.21
TMC3-201ENST00000359440 CHD1LQ86WJ1 897 aa13.74□□□□□ -0.21
TMC3-201ENST00000359440 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
TMC3-201ENST00000359440 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.73□□□□□ -0.21
TMC3-201ENST00000359440 RNF123Q5XPI4 1314 aa13.73□□□□□ -0.21
TMC3-201ENST00000359440 GNAI3P08754 354 aa13.73□□□□□ -0.21
TMC3-201ENST00000359440 MLECQ14165 292 aa13.73□□□□□ -0.21
TMC3-201ENST00000359440 SMC3Q9UQE7 1217 aa13.73□□□□□ -0.21
TMC3-201ENST00000359440 EID1Q9Y6B2 187 aa13.73□□□□□ -0.21
TMC3-201ENST00000359440 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
TMC3-201ENST00000359440 NOB1Q9ULX3 412 aaKnown RBP13.73□□□□□ -0.21
TMC3-201ENST00000359440 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.73□□□□□ -0.21
TMC3-201ENST00000359440 BECN2A8MW95 431 aa13.73□□□□□ -0.21
TMC3-201ENST00000359440 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
TMC3-201ENST00000359440 SCAF11Q99590 1463 aaKnown RBP13.72□□□□□ -0.21
TMC3-201ENST00000359440 ATAD2Q6PL18 1390 aa13.72□□□□□ -0.21
TMC3-201ENST00000359440 C20orf194Q5TEA3 1177 aa13.72□□□□□ -0.21
TMC3-201ENST00000359440 H3BQV1 296 aa13.72□□□□□ -0.21
TMC3-201ENST00000359440 ERC2O15083 957 aa13.72□□□□□ -0.21
TMC3-201ENST00000359440 IFFO2Q5TF58 517 aa13.72□□□□□ -0.21
TMC3-201ENST00000359440 CAVIN1Q6NZI2 390 aaKnown RBP13.71□□□□□ -0.21
TMC3-201ENST00000359440 FAM184AQ8NB25 1140 aa13.71□□□□□ -0.21
TMC3-201ENST00000359440 ALDH1L2Q3SY69 923 aa13.71□□□□□ -0.22
TMC3-201ENST00000359440 ARID3AQ99856 593 aa13.71□□□□□ -0.22
TMC3-201ENST00000359440 SLC12A5Q9H2X9 1139 aa13.71□□□□□ -0.22
TMC3-201ENST00000359440 LRRFIP1Q32MZ4 808 aaKnown RBP13.7□□□□□ -0.22
TMC3-201ENST00000359440 ARHGEF11O15085 1522 aa13.7□□□□□ -0.22
TMC3-201ENST00000359440 AFAP1Q8N556 730 aa13.7□□□□□ -0.22
TMC3-201ENST00000359440 SF3A1Q15459 793 aaKnown RBP13.7□□□□□ -0.22
TMC3-201ENST00000359440 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
TMC3-201ENST00000359440 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
TMC3-201ENST00000359440 R3HCC1Q9Y3T6 440 aaKnown RBP13.7□□□□□ -0.22
TMC3-201ENST00000359440 NSD2O96028 1365 aa13.7□□□□□ -0.22
TMC3-201ENST00000359440 FCHSD2O94868 740 aa13.7□□□□□ -0.22
TMC3-201ENST00000359440 PDIA4P13667 645 aaKnown RBP13.7□□□□□ -0.22
TMC3-201ENST00000359440 TSPY26PQ9H489 355 aa13.7□□□□□ -0.22
TMC3-201ENST00000359440 GPATCH8Q9UKJ3 1502 aaKnown RBP13.7□□□□□ -0.22
TMC3-201ENST00000359440 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
TMC3-201ENST00000359440 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
TMC3-201ENST00000359440 NSD3Q9BZ95 1437 aa13.69□□□□□ -0.22
TMC3-201ENST00000359440 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
TMC3-201ENST00000359440 FKBP5Q13451 457 aaPredicted RBP13.69□□□□□ -0.22
TMC3-201ENST00000359440 ZSCAN30Q86W11 494 aa13.68□□□□□ -0.22
TMC3-201ENST00000359440 PDCP20941 246 aa13.68□□□□□ -0.22
TMC3-201ENST00000359440 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
TMC3-201ENST00000359440 URB2Q14146 1524 aaKnown RBP13.68□□□□□ -0.22
TMC3-201ENST00000359440 RPAP2Q8IXW5 612 aaPredicted RBP13.68□□□□□ -0.22
TMC3-201ENST00000359440 TSR2Q969E8 191 aaKnown RBP13.68□□□□□ -0.22
TMC3-201ENST00000359440 TMEM132EQ6IEE7 984 aa13.67□□□□□ -0.22
TMC3-201ENST00000359440 SLC52A1Q9NWF4 448 aa13.67□□□□□ -0.22
TMC3-201ENST00000359440 NEK4P51957 841 aa13.67□□□□□ -0.22
TMC3-201ENST00000359440 TBC1D2Q9BYX2 928 aa13.67□□□□□ -0.22
TMC3-201ENST00000359440 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
TMC3-201ENST00000359440 IFIT2P09913 472 aaKnown RBP13.67□□□□□ -0.22
TMC3-201ENST00000359440 TSPYL4Q9UJ04 414 aa13.67□□□□□ -0.22
TMC3-201ENST00000359440 UHRF1BP1Q6BDS2 1440 aa13.67□□□□□ -0.22
TMC3-201ENST00000359440 PRPF40AO75400 957 aaKnown RBP13.67□□□□□ -0.22
TMC3-201ENST00000359440 EIF2AK4Q9P2K8 1649 aaKnown RBP13.66□□□□□ -0.22
TMC3-201ENST00000359440 TMPOP42166 694 aaKnown RBP13.66□□□□□ -0.22
TMC3-201ENST00000359440 GORABQ5T7V8 394 aa13.66□□□□□ -0.22
TMC3-201ENST00000359440 SRCIN1Q9C0H9 1055 aa13.66□□□□□ -0.22
TMC3-201ENST00000359440 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
TMC3-201ENST00000359440 PLB1Q6P1J6 1458 aa13.66□□□□□ -0.22
TMC3-201ENST00000359440 TEFQ10587 303 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms