RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TBC1D32Q96NH3 1257 aa8.24□□□□□ -1.09
CSDE1-203ENST00000358528 HMOX1P09601 288 aa8.23□□□□□ -1.09
CSDE1-203ENST00000358528 VSIG10Q8N0Z9 540 aa8.23□□□□□ -1.09
CSDE1-203ENST00000358528 RRAGDQ9NQL2 400 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-203ENST00000358528 NGEFQ8N5V2 710 aa8.23□□□□□ -1.09
CSDE1-203ENST00000358528 ASXL1Q8IXJ9 1541 aa8.22□□□□□ -1.09
CSDE1-203ENST00000358528 DDX11L8A8MPP1 907 aa8.22□□□□□ -1.09
CSDE1-203ENST00000358528 TMEM57Q8N5G2 664 aa8.22□□□□□ -1.09
CSDE1-203ENST00000358528 SSH1Q8WYL5 1049 aa8.22□□□□□ -1.09
CSDE1-203ENST00000358528 XRCC6P12956 609 aaKnown RBP eCLIP8.22□□□□□ -1.09
CSDE1-203ENST00000358528 NOL8Q76FK4 1167 aaKnown RBP8.22□□□□□ -1.09
CSDE1-203ENST00000358528 ZNF521Q96K83 1311 aa8.22□□□□□ -1.09
CSDE1-203ENST00000358528 SCAF11Q99590 1463 aaKnown RBP8.22□□□□□ -1.09
CSDE1-203ENST00000358528 HSP90AA2PQ14568 343 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-203ENST00000358528 DDX49Q9Y6V7 483 aaKnown RBP8.22□□□□□ -1.09
CSDE1-203ENST00000358528 PLA2R1Q13018 1463 aa8.21□□□□□ -1.09
CSDE1-203ENST00000358528 SCAPERQ9BY12 1400 aa8.21□□□□□ -1.09
CSDE1-203ENST00000358528 GPRASP1Q5JY77 1395 aa8.21□□□□□ -1.09
CSDE1-203ENST00000358528 FOXD4L6Q3SYB3 417 aaPredicted RBP8.21□□□□□ -1.09
CSDE1-203ENST00000358528 PLPPR3Q6T4P5 718 aa8.21□□□□□ -1.09
CSDE1-203ENST00000358528 FOXD4L3Q6VB84 417 aaPredicted RBP8.21□□□□□ -1.09
CSDE1-203ENST00000358528 SHANK2Q9UPX8 1470 aa8.21□□□□□ -1.09
CSDE1-203ENST00000358528 THUMPD2Q9BTF0 503 aaKnown RBP8.21□□□□□ -1.1
CSDE1-203ENST00000358528 KDM5DQ9BY66 1539 aa8.21□□□□□ -1.1
CSDE1-203ENST00000358528 EVC2Q86UK5 1308 aa8.21□□□□□ -1.1
CSDE1-203ENST00000358528 TRIM27P14373 513 aa8.21□□□□□ -1.1
CSDE1-203ENST00000358528 FBLN1P23142 703 aa8.21□□□□□ -1.1
CSDE1-203ENST00000358528 ATF7IPQ6VMQ6 1270 aa8.21□□□□□ -1.1
CSDE1-203ENST00000358528 WDR63Q8IWG1 891 aa8.21□□□□□ -1.1
CSDE1-203ENST00000358528 EIF4G3O43432 1585 aaKnown RBP8.2□□□□□ -1.1
CSDE1-203ENST00000358528 MSNP26038 577 aaKnown RBP8.2□□□□□ -1.1
CSDE1-203ENST00000358528 CEP170Q5SW79 1584 aa8.2□□□□□ -1.1
CSDE1-203ENST00000358528 USP19O94966 1318 aa8.2□□□□□ -1.1
CSDE1-203ENST00000358528 MRE11P49959 708 aa8.2□□□□□ -1.1
CSDE1-203ENST00000358528 GRPEL1Q9HAV7 217 aa8.2□□□□□ -1.1
CSDE1-203ENST00000358528 ABCC10Q5T3U5 1492 aa8.19□□□□□ -1.1
CSDE1-203ENST00000358528 DIAPH1O60610 1272 aaKnown RBP8.19□□□□□ -1.1
CSDE1-203ENST00000358528 PTMAP06454 111 aaKnown RBP8.19□□□□□ -1.1
CSDE1-203ENST00000358528 WDR7Q9Y4E6 1490 aa8.19□□□□□ -1.1
CSDE1-203ENST00000358528 PLEKHG5O94827 1062 aa8.19□□□□□ -1.1
CSDE1-203ENST00000358528 TMPOP42166 694 aaKnown RBP8.19□□□□□ -1.1
CSDE1-203ENST00000358528 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-203ENST00000358528 TRMT2AQ8IZ69 625 aaKnown RBP8.19□□□□□ -1.1
CSDE1-203ENST00000358528 PIK3C2GO75747 1445 aa8.18□□□□□ -1.1
CSDE1-203ENST00000358528 TRAPPC8Q9Y2L5 1435 aa8.18□□□□□ -1.1
CSDE1-203ENST00000358528 TERF2IPQ9NYB0 399 aa8.18□□□□□ -1.1
CSDE1-203ENST00000358528 PLCB2Q00722 1185 aa8.18□□□□□ -1.1
CSDE1-203ENST00000358528 CALD1Q05682 793 aaKnown RBP8.18□□□□□ -1.1
CSDE1-203ENST00000358528 MCTP1Q6DN14 999 aa8.18□□□□□ -1.1
CSDE1-203ENST00000358528 STAC3Q96MF2 364 aa8.18□□□□□ -1.1
CSDE1-203ENST00000358528 NINLQ9Y2I6 1382 aa8.18□□□□□ -1.1
CSDE1-203ENST00000358528 RBM42Q9BTD8 480 aaKnown RBP8.18□□□□□ -1.1
CSDE1-203ENST00000358528 CDC42BPAQ5VT25 1732 aa8.17□□□□□ -1.1
CSDE1-203ENST00000358528 NUTM2FA1L443 756 aa8.17□□□□□ -1.1
CSDE1-203ENST00000358528 PRKAR2BP31323 418 aa8.17□□□□□ -1.1
CSDE1-203ENST00000358528 DNTTIP2Q5QJE6 756 aaKnown RBP8.17□□□□□ -1.1
CSDE1-203ENST00000358528 TNPO1Q92973 898 aaKnown RBP8.17□□□□□ -1.1
CSDE1-203ENST00000358528 TRPM1Q7Z4N2 1603 aa8.17□□□□□ -1.1
CSDE1-203ENST00000358528 SLC4A10Q6U841 1118 aa8.17□□□□□ -1.1
CSDE1-203ENST00000358528 AAMPQ13685 434 aa8.17□□□□□ -1.1
CSDE1-203ENST00000358528 CASC1Q6TDU7 716 aa8.17□□□□□ -1.1
CSDE1-203ENST00000358528 CHD1LQ86WJ1 897 aa8.17□□□□□ -1.1
CSDE1-203ENST00000358528 NUP160Q12769 1436 aa8.17□□□□□ -1.1
CSDE1-203ENST00000358528 ESPNB1AK53 854 aa8.16□□□□□ -1.1
CSDE1-203ENST00000358528 MLECQ14165 292 aa8.16□□□□□ -1.1
CSDE1-203ENST00000358528 KIF16BQ96L93 1317 aa8.16□□□□□ -1.1
CSDE1-203ENST00000358528 SAMD9LQ8IVG5 1584 aa8.16□□□□□ -1.1
CSDE1-203ENST00000358528 NOS1P29475 1434 aa8.15□□□□□ -1.1
CSDE1-203ENST00000358528 CAVIN1Q6NZI2 390 aaKnown RBP8.15□□□□□ -1.1
CSDE1-203ENST00000358528 VGFO15240 615 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-203ENST00000358528 SSFA2P28290 1259 aa8.15□□□□□ -1.1
CSDE1-203ENST00000358528 NASPP49321 788 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-203ENST00000358528 EIF2AK4Q9P2K8 1649 aaKnown RBP8.15□□□□□ -1.1
CSDE1-203ENST00000358528 PRDM15P57071 1507 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-203ENST00000358528 MPNDQ8N594 471 aa8.15□□□□□ -1.11
CSDE1-203ENST00000358528 CHMP4BQ9H444 224 aaKnown RBP8.15□□□□□ -1.11
CSDE1-203ENST00000358528 PRAM1Q96QH2 718 aa8.14□□□□□ -1.11
CSDE1-203ENST00000358528 CROCC2H7BZ55 1655 aa8.14□□□□□ -1.11
CSDE1-203ENST00000358528 POLR3AO14802 1390 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-203ENST00000358528 INSRP06213 1382 aa8.14□□□□□ -1.11
CSDE1-203ENST00000358528 RBM10P98175 930 aaKnown RBP8.14□□□□□ -1.11
CSDE1-203ENST00000358528 CFAP65Q6ZU64 1925 aaKnown RBP8.14□□□□□ -1.11
CSDE1-203ENST00000358528 ANTXR1Q9H6X2 564 aa8.14□□□□□ -1.11
CSDE1-203ENST00000358528 DUOX2Q9NRD8 1548 aa8.14□□□□□ -1.11
CSDE1-203ENST00000358528 RNF214Q8ND24 703 aa8.13□□□□□ -1.11
CSDE1-203ENST00000358528 UBE2Q2Q8WVN8 375 aa8.13□□□□□ -1.11
CSDE1-203ENST00000358528 DCTN1Q14203 1278 aa8.13□□□□□ -1.11
CSDE1-203ENST00000358528 SKOR2Q2VWA4 1001 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-203ENST00000358528 CABP1Q9NZU7 370 aa8.13□□□□□ -1.11
CSDE1-203ENST00000358528 K7ELQ4 463 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-203ENST00000358528 FAM13BQ9NYF5 915 aa8.13□□□□□ -1.11
CSDE1-203ENST00000358528 NECTIN2Q92692 538 aa8.13□□□□□ -1.11
CSDE1-203ENST00000358528 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
CSDE1-203ENST00000358528 PRPF40AO75400 957 aaKnown RBP8.12□□□□□ -1.11
CSDE1-203ENST00000358528 CDC45O75419 566 aa8.12□□□□□ -1.11
CSDE1-203ENST00000358528 ADCY10Q96PN6 1610 aa8.12□□□□□ -1.11
CSDE1-203ENST00000358528 TWISTNBQ3B726 338 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-203ENST00000358528 TBC1D9Q6ZT07 1266 aa8.12□□□□□ -1.11
CSDE1-203ENST00000358528 R3HCC1Q9Y3T6 440 aaKnown RBP8.12□□□□□ -1.11
CSDE1-203ENST00000358528 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms