RNA–Protein interactions for RNA: ENST00000358184.6

CTSE-201, Transcript of cathepsin E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSE, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-201ENST00000358184 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
CTSE-201ENST00000358184 TRPM2O94759 1503 aa13.61□□□□□ -0.23
CTSE-201ENST00000358184 CEP152O94986 1710 aa13.6□□□□□ -0.23
CTSE-201ENST00000358184 MRS2Q9HD23 443 aa13.6□□□□□ -0.23
CTSE-201ENST00000358184 CLGNO14967 610 aa13.6□□□□□ -0.23
CTSE-201ENST00000358184 NPATQ14207 1427 aa13.6□□□□□ -0.23
CTSE-201ENST00000358184 KIF20AO95235 890 aa13.59□□□□□ -0.23
CTSE-201ENST00000358184 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
CTSE-201ENST00000358184 CAMSAP1Q5T5Y3 1602 aa13.59□□□□□ -0.23
CTSE-201ENST00000358184 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
CTSE-201ENST00000358184 FAM9BQ8IZU0 186 aa13.58□□□□□ -0.24
CTSE-201ENST00000358184 PRDM10Q9NQV6 1147 aa13.58□□□□□ -0.24
CTSE-201ENST00000358184 SPHKAPQ2M3C7 1700 aa13.57□□□□□ -0.24
CTSE-201ENST00000358184 KIF7Q2M1P5 1343 aa13.57□□□□□ -0.24
CTSE-201ENST00000358184 GRIPAP1Q4V328 841 aa13.56□□□□□ -0.24
CTSE-201ENST00000358184 SMG6Q86US8 1419 aaKnown RBP13.56□□□□□ -0.24
CTSE-201ENST00000358184 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
CTSE-201ENST00000358184 MLECQ14165 292 aa13.55□□□□□ -0.24
CTSE-201ENST00000358184 NOS1P29475 1434 aa13.55□□□□□ -0.24
CTSE-201ENST00000358184 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
CTSE-201ENST00000358184 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
CTSE-201ENST00000358184 ESF1Q9H501 851 aaKnown RBP13.55□□□□□ -0.24
CTSE-201ENST00000358184 FAM193AP78312 1265 aa13.54□□□□□ -0.24
CTSE-201ENST00000358184 NEURL4Q96JN8 1562 aa13.54□□□□□ -0.24
CTSE-201ENST00000358184 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
CTSE-201ENST00000358184 MTERF4Q7Z6M4 381 aaKnown RBP13.53□□□□□ -0.24
CTSE-201ENST00000358184 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
CTSE-201ENST00000358184 PTMAP06454 111 aaKnown RBP13.52□□□□□ -0.24
CTSE-201ENST00000358184 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.24
CTSE-201ENST00000358184 SLC52A1Q9NWF4 448 aa13.52□□□□□ -0.24
CTSE-201ENST00000358184 CLTCL1P53675 1640 aa13.52□□□□□ -0.25
CTSE-201ENST00000358184 ZSCAN20P17040 1043 aaPredicted RBP13.52□□□□□ -0.25
CTSE-201ENST00000358184 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.25
CTSE-201ENST00000358184 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.25
CTSE-201ENST00000358184 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.51□□□□□ -0.25
CTSE-201ENST00000358184 DNTTIP2Q5QJE6 756 aaKnown RBP13.51□□□□□ -0.25
CTSE-201ENST00000358184 GTPBP4Q9BZE4 634 aaKnown RBP13.51□□□□□ -0.25
CTSE-201ENST00000358184 ZMYM3Q14202 1370 aa13.5□□□□□ -0.25
CTSE-201ENST00000358184 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
CTSE-201ENST00000358184 PSEN1P49768 467 aa13.5□□□□□ -0.25
CTSE-201ENST00000358184 TERF1P54274 439 aa13.5□□□□□ -0.25
CTSE-201ENST00000358184 ZNF622Q969S3 477 aaKnown RBP eCLIP13.5□□□□□ -0.25
CTSE-201ENST00000358184 ERVK-7P63135 1459 aa13.49□□□□□ -0.25
CTSE-201ENST00000358184 UHRF1BP1Q6BDS2 1440 aa13.49□□□□□ -0.25
CTSE-201ENST00000358184 AXDND1Q5T1B0 1012 aaPredicted RBP13.49□□□□□ -0.25
CTSE-201ENST00000358184 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
CTSE-201ENST00000358184 SYNMO15061 1565 aa13.49□□□□□ -0.25
CTSE-201ENST00000358184 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
CTSE-201ENST00000358184 TMED8Q6PL24 325 aaPredicted RBP13.48□□□□□ -0.25
CTSE-201ENST00000358184 MROH2AA6NES4 1674 aa13.48□□□□□ -0.25
CTSE-201ENST00000358184 PREX1Q8TCU6 1659 aa13.48□□□□□ -0.25
CTSE-201ENST00000358184 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
CTSE-201ENST00000358184 RIPK4P57078 832 aa13.48□□□□□ -0.25
CTSE-201ENST00000358184 SLC20A2Q08357 652 aa13.48□□□□□ -0.25
CTSE-201ENST00000358184 SPATA31D1Q6ZQQ2 1576 aa13.48□□□□□ -0.25
CTSE-201ENST00000358184 UGGT1Q9NYU2 1555 aa13.48□□□□□ -0.25
CTSE-201ENST00000358184 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
CTSE-201ENST00000358184 ESPNB1AK53 854 aa13.47□□□□□ -0.25
CTSE-201ENST00000358184 FBXO31Q5XUX0 539 aaPredicted RBP13.47□□□□□ -0.25
CTSE-201ENST00000358184 KIAA1211Q6ZU35 1233 aa13.47□□□□□ -0.25
CTSE-201ENST00000358184 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
CTSE-201ENST00000358184 PATL2C9JE40 543 aaKnown RBP13.45□□□□□ -0.26
CTSE-201ENST00000358184 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
CTSE-201ENST00000358184 ADGRB3O60242 1522 aa13.45□□□□□ -0.26
CTSE-201ENST00000358184 USP47Q96K76 1375 aa13.45□□□□□ -0.26
CTSE-201ENST00000358184 KIF1BO60333 1816 aa13.45□□□□□ -0.26
CTSE-201ENST00000358184 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
CTSE-201ENST00000358184 IDI1Q13907 227 aa13.44□□□□□ -0.26
CTSE-201ENST00000358184 RPGRIP1LQ68CZ1 1315 aa13.44□□□□□ -0.26
CTSE-201ENST00000358184 TCERG1O14776 1098 aaKnown RBP13.44□□□□□ -0.26
CTSE-201ENST00000358184 APPP05067 770 aa13.44□□□□□ -0.26
CTSE-201ENST00000358184 PTMSP20962 102 aa13.44□□□□□ -0.26
CTSE-201ENST00000358184 CFAP65Q6ZU64 1925 aaKnown RBP13.43□□□□□ -0.26
CTSE-201ENST00000358184 PDE4AP27815 886 aa13.43□□□□□ -0.26
CTSE-201ENST00000358184 PRAG1Q86YV5 1406 aa13.43□□□□□ -0.26
CTSE-201ENST00000358184 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
CTSE-201ENST00000358184 BACH2Q9BYV9 841 aa13.43□□□□□ -0.26
CTSE-201ENST00000358184 KDM2AQ9Y2K7 1162 aa13.43□□□□□ -0.26
CTSE-201ENST00000358184 E9PSI1 815 aa13.42□□□□□ -0.26
CTSE-201ENST00000358184 XRCC6P12956 609 aaKnown RBP eCLIP13.42□□□□□ -0.26
CTSE-201ENST00000358184 MCCP23508 829 aa13.41□□□□□ -0.26
CTSE-201ENST00000358184 RALGAPBQ86X10 1494 aa13.41□□□□□ -0.26
CTSE-201ENST00000358184 FAM43BQ6ZT52 329 aaPredicted RBP13.41□□□□□ -0.26
CTSE-201ENST00000358184 MYOM2P54296 1465 aa13.41□□□□□ -0.26
CTSE-201ENST00000358184 TNRQ92752 1358 aa13.41□□□□□ -0.26
CTSE-201ENST00000358184 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
CTSE-201ENST00000358184 FAM13BQ9NYF5 915 aa13.4□□□□□ -0.26
CTSE-201ENST00000358184 POGKQ9P215 609 aa13.4□□□□□ -0.26
CTSE-201ENST00000358184 ADAMTSL3P82987 1691 aa13.4□□□□□ -0.26
CTSE-201ENST00000358184 SOX12O15370 315 aa13.4□□□□□ -0.26
CTSE-201ENST00000358184 GOLGA6L3A6NEY3 463 aa13.39□□□□□ -0.27
CTSE-201ENST00000358184 PNISRQ8TF01 805 aaKnown RBP13.39□□□□□ -0.27
CTSE-201ENST00000358184 ARID3AQ99856 593 aa13.39□□□□□ -0.27
CTSE-201ENST00000358184 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
CTSE-201ENST00000358184 PHF14O94880 888 aa13.39□□□□□ -0.27
CTSE-201ENST00000358184 CLSTN1O94985 981 aa13.39□□□□□ -0.27
CTSE-201ENST00000358184 MS4A1P11836 297 aa13.39□□□□□ -0.27
CTSE-201ENST00000358184 TMEM131LA2VDJ0 1609 aa13.38□□□□□ -0.27
CTSE-201ENST00000358184 ERBB4Q15303 1308 aa13.38□□□□□ -0.27
CTSE-201ENST00000358184 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms