RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 PRAM1Q96QH2 718 aa10.63□□□□□ -0.71
CD46-205ENST00000358170 NKTRP30414 1462 aaKnown RBP10.63□□□□□ -0.71
CD46-205ENST00000358170 SEC24BO95487 1268 aa10.62□□□□□ -0.71
CD46-205ENST00000358170 PIK3C2GO75747 1445 aa10.62□□□□□ -0.71
CD46-205ENST00000358170 ELL2O00472 640 aaPredicted RBP10.62□□□□□ -0.71
CD46-205ENST00000358170 RARSP54136 660 aaKnown RBP10.62□□□□□ -0.71
CD46-205ENST00000358170 MAPK8IP3Q9UPT6 1336 aa10.61□□□□□ -0.71
CD46-205ENST00000358170 SMC4Q9NTJ3 1288 aa10.61□□□□□ -0.71
CD46-205ENST00000358170 PCDHB15Q9Y5E8 787 aa10.61□□□□□ -0.71
CD46-205ENST00000358170 TRMT2AQ8IZ69 625 aaKnown RBP10.61□□□□□ -0.71
CD46-205ENST00000358170 UHRF1BP1LA0JNW5 1464 aa10.61□□□□□ -0.71
CD46-205ENST00000358170 EXOSC9Q06265 439 aaKnown RBP10.6□□□□□ -0.71
CD46-205ENST00000358170 NFKBIBQ15653 356 aa10.6□□□□□ -0.71
CD46-205ENST00000358170 NPATQ14207 1427 aa10.6□□□□□ -0.71
CD46-205ENST00000358170 NUTM2FA1L443 756 aa10.6□□□□□ -0.71
CD46-205ENST00000358170 ITPRIPQ8IWB1 547 aa10.6□□□□□ -0.71
CD46-205ENST00000358170 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
CD46-205ENST00000358170 SOX12O15370 315 aa10.59□□□□□ -0.71
CD46-205ENST00000358170 WAPLQ7Z5K2 1190 aa10.59□□□□□ -0.71
CD46-205ENST00000358170 CABP1Q9NZU7 370 aa10.59□□□□□ -0.71
CD46-205ENST00000358170 HMOX1P09601 288 aa10.59□□□□□ -0.71
CD46-205ENST00000358170 SPHKAPQ2M3C7 1700 aa10.59□□□□□ -0.71
CD46-205ENST00000358170 FRAT2O75474 233 aaPredicted RBP10.59□□□□□ -0.71
CD46-205ENST00000358170 RIPK4P57078 832 aa10.58□□□□□ -0.72
CD46-205ENST00000358170 PDE3AQ14432 1141 aa10.58□□□□□ -0.72
CD46-205ENST00000358170 THUMPD2Q9BTF0 503 aaKnown RBP10.58□□□□□ -0.72
CD46-205ENST00000358170 MYH16Q9H6N6 1097 aa10.58□□□□□ -0.72
CD46-205ENST00000358170 PDZRN3Q9UPQ7 1066 aa10.58□□□□□ -0.72
CD46-205ENST00000358170 CLASP1Q7Z460 1538 aa10.57□□□□□ -0.72
CD46-205ENST00000358170 SYNMO15061 1565 aa10.57□□□□□ -0.72
CD46-205ENST00000358170 NPC1L1Q9UHC9 1359 aa10.57□□□□□ -0.72
CD46-205ENST00000358170 POLR3AO14802 1390 aaPredicted RBP10.56□□□□□ -0.72
CD46-205ENST00000358170 LAMC1P11047 1609 aa10.56□□□□□ -0.72
CD46-205ENST00000358170 CDK19Q9BWU1 502 aa10.56□□□□□ -0.72
CD46-205ENST00000358170 ZNF518AQ6AHZ1 1483 aa10.56□□□□□ -0.72
CD46-205ENST00000358170 ZKSCAN2Q63HK3 967 aa10.56□□□□□ -0.72
CD46-205ENST00000358170 TERF2IPQ9NYB0 399 aa10.56□□□□□ -0.72
CD46-205ENST00000358170 TET3O43151 1660 aa10.55□□□□□ -0.72
CD46-205ENST00000358170 IQGAP1P46940 1657 aa10.55□□□□□ -0.72
CD46-205ENST00000358170 RNF17Q9BXT8 1623 aaKnown RBP10.55□□□□□ -0.72
CD46-205ENST00000358170 FYB1O15117 783 aa10.55□□□□□ -0.72
CD46-205ENST00000358170 DZIP1LQ8IYY4 767 aaKnown RBP10.55□□□□□ -0.72
CD46-205ENST00000358170 INSRP06213 1382 aa10.55□□□□□ -0.72
CD46-205ENST00000358170 KDM5AP29375 1690 aaKnown RBP10.55□□□□□ -0.72
CD46-205ENST00000358170 ABCA6Q8N139 1617 aa10.55□□□□□ -0.72
CD46-205ENST00000358170 TMPOP42166 694 aaKnown RBP10.55□□□□□ -0.72
CD46-205ENST00000358170 FAM69CQ0P6D2 419 aa10.55□□□□□ -0.72
CD46-205ENST00000358170 HDGFL2Q7Z4V5 671 aaPredicted RBP10.55□□□□□ -0.72
CD46-205ENST00000358170 SSH1Q8WYL5 1049 aa10.55□□□□□ -0.72
CD46-205ENST00000358170 UPF2Q9HAU5 1272 aaKnown RBP10.55□□□□□ -0.72
CD46-205ENST00000358170 MFAP1P55081 439 aaKnown RBP10.54□□□□□ -0.72
CD46-205ENST00000358170 RWDD1Q9H446 243 aaPredicted RBP10.54□□□□□ -0.72
CD46-205ENST00000358170 DIAPH1O60610 1272 aaKnown RBP10.54□□□□□ -0.72
CD46-205ENST00000358170 WDR63Q8IWG1 891 aa10.54□□□□□ -0.72
CD46-205ENST00000358170 PMFBP1Q8TBY8 1022 aa10.54□□□□□ -0.72
CD46-205ENST00000358170 NOB1Q9ULX3 412 aaKnown RBP10.54□□□□□ -0.72
CD46-205ENST00000358170 NCKAP5LQ9HCH0 1330 aa10.54□□□□□ -0.72
CD46-205ENST00000358170 MAP3K4Q9Y6R4 1608 aa10.54□□□□□ -0.72
CD46-205ENST00000358170 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
CD46-205ENST00000358170 BRPF3Q9ULD4 1205 aa10.53□□□□□ -0.72
CD46-205ENST00000358170 RPGRIP1LQ68CZ1 1315 aa10.53□□□□□ -0.72
CD46-205ENST00000358170 CEP152O94986 1710 aa10.53□□□□□ -0.72
CD46-205ENST00000358170 A0A1W2PP64 1363 aa10.53□□□□□ -0.72
CD46-205ENST00000358170 PRKAR2BP31323 418 aa10.52□□□□□ -0.72
CD46-205ENST00000358170 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.72
CD46-205ENST00000358170 EFCAB6Q5THR3 1501 aa10.52□□□□□ -0.73
CD46-205ENST00000358170 TRIM27P14373 513 aa10.52□□□□□ -0.73
CD46-205ENST00000358170 TXNDC2Q86VQ3 553 aa10.52□□□□□ -0.73
CD46-205ENST00000358170 NGEFQ8N5V2 710 aa10.52□□□□□ -0.73
CD46-205ENST00000358170 ESF1Q9H501 851 aaKnown RBP10.52□□□□□ -0.73
CD46-205ENST00000358170 MVPQ14764 893 aaKnown RBP10.51□□□□□ -0.73
CD46-205ENST00000358170 PPRC1Q5VV67 1664 aaKnown RBP10.51□□□□□ -0.73
CD46-205ENST00000358170 GSE1Q14687 1217 aa10.51□□□□□ -0.73
CD46-205ENST00000358170 LNPKQ9C0E8 428 aa10.51□□□□□ -0.73
CD46-205ENST00000358170 KIF1BO60333 1816 aa10.51□□□□□ -0.73
CD46-205ENST00000358170 RRS1Q15050 365 aaKnown RBP10.51□□□□□ -0.73
CD46-205ENST00000358170 TMEM57Q8N5G2 664 aa10.51□□□□□ -0.73
CD46-205ENST00000358170 USP35Q9P2H5 1018 aa10.51□□□□□ -0.73
CD46-205ENST00000358170 EMILIN1Q9Y6C2 1016 aa10.51□□□□□ -0.73
CD46-205ENST00000358170 YEATS2Q9ULM3 1422 aa10.51□□□□□ -0.73
CD46-205ENST00000358170 MYOM2P54296 1465 aa10.51□□□□□ -0.73
CD46-205ENST00000358170 INO80Q9ULG1 1556 aaPredicted RBP10.5□□□□□ -0.73
CD46-205ENST00000358170 PLEKHG5O94827 1062 aa10.5□□□□□ -0.73
CD46-205ENST00000358170 SLC52A1Q9NWF4 448 aa10.5□□□□□ -0.73
CD46-205ENST00000358170 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
CD46-205ENST00000358170 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
CD46-205ENST00000358170 ANKRD36BQ8N2N9 1353 aa10.5□□□□□ -0.73
CD46-205ENST00000358170 BECN1Q14457 450 aa10.5□□□□□ -0.73
CD46-205ENST00000358170 KIDINS220Q9ULH0 1771 aa10.5□□□□□ -0.73
CD46-205ENST00000358170 DCTN1Q14203 1278 aa10.49□□□□□ -0.73
CD46-205ENST00000358170 MROH2AA6NES4 1674 aa10.49□□□□□ -0.73
CD46-205ENST00000358170 MYOM1P52179 1685 aa10.49□□□□□ -0.73
CD46-205ENST00000358170 APBB1O00213 710 aa10.49□□□□□ -0.73
CD46-205ENST00000358170 NME9Q86XW9 330 aa10.49□□□□□ -0.73
CD46-205ENST00000358170 PHACTR3Q96KR7 559 aa10.49□□□□□ -0.73
CD46-205ENST00000358170 MROH1Q8NDA8 1641 aa10.49□□□□□ -0.73
CD46-205ENST00000358170 GZF1Q9H116 711 aaPredicted RBP10.49□□□□□ -0.73
CD46-205ENST00000358170 ATF7IPQ6VMQ6 1270 aa10.48□□□□□ -0.73
CD46-205ENST00000358170 ABCA9Q8IUA7 1624 aa10.48□□□□□ -0.73
CD46-205ENST00000358170 SBNO2Q9Y2G9 1366 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms