RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 KDM2BQ8NHM5 1336 aa8.55□□□□□ -1.04
RTN4-203ENST00000357376 GLIPR1L2Q4G1C9 344 aa8.55□□□□□ -1.04
RTN4-203ENST00000357376 WDR63Q8IWG1 891 aa8.55□□□□□ -1.04
RTN4-203ENST00000357376 PCDHB15Q9Y5E8 787 aa8.55□□□□□ -1.04
RTN4-203ENST00000357376 CEP170Q5SW79 1584 aa8.55□□□□□ -1.04
RTN4-203ENST00000357376 TRAPPC8Q9Y2L5 1435 aa8.55□□□□□ -1.04
RTN4-203ENST00000357376 ASXL1Q8IXJ9 1541 aa8.54□□□□□ -1.04
RTN4-203ENST00000357376 ADGBQ8N7X0 1667 aa8.54□□□□□ -1.04
RTN4-203ENST00000357376 RLBP1P12271 317 aa8.54□□□□□ -1.04
RTN4-203ENST00000357376 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
RTN4-203ENST00000357376 GPRASP1Q5JY77 1395 aa8.54□□□□□ -1.04
RTN4-203ENST00000357376 SLC4A10Q6U841 1118 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 ABCC10Q5T3U5 1492 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 CALD1Q05682 793 aaKnown RBP8.53□□□□□ -1.04
RTN4-203ENST00000357376 FOXD4L5Q5VV16 416 aaPredicted RBP8.53□□□□□ -1.04
RTN4-203ENST00000357376 ATF7IPQ6VMQ6 1270 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 FOXD4L4Q8WXT5 416 aaPredicted RBP8.53□□□□□ -1.04
RTN4-203ENST00000357376 KIF16BQ96L93 1317 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 NUP160Q12769 1436 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 ZMYM4Q5VZL5 1548 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 DDX11L8A8MPP1 907 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 PRKAR2BP31323 418 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 PRAM1Q96QH2 718 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 TBC1D2Q9BYX2 928 aa8.53□□□□□ -1.04
RTN4-203ENST00000357376 AAMPQ13685 434 aa8.52□□□□□ -1.04
RTN4-203ENST00000357376 NOL8Q76FK4 1167 aaKnown RBP8.52□□□□□ -1.04
RTN4-203ENST00000357376 SSH1Q8WYL5 1049 aa8.52□□□□□ -1.04
RTN4-203ENST00000357376 TRAK2O60296 914 aa8.52□□□□□ -1.05
RTN4-203ENST00000357376 TMEM57Q8N5G2 664 aa8.52□□□□□ -1.05
RTN4-203ENST00000357376 NINLQ9Y2I6 1382 aa8.52□□□□□ -1.05
RTN4-203ENST00000357376 MAGI2Q86UL8 1455 aa8.52□□□□□ -1.05
RTN4-203ENST00000357376 THUMPD2Q9BTF0 503 aaKnown RBP8.52□□□□□ -1.05
RTN4-203ENST00000357376 NOS1P29475 1434 aa8.52□□□□□ -1.05
RTN4-203ENST00000357376 PTMAP06454 111 aaKnown RBP8.52□□□□□ -1.05
RTN4-203ENST00000357376 TMPOP42166 694 aaKnown RBP8.52□□□□□ -1.05
RTN4-203ENST00000357376 DUOX2Q9NRD8 1548 aa8.51□□□□□ -1.05
RTN4-203ENST00000357376 RAPGEF3O95398 923 aa8.51□□□□□ -1.05
RTN4-203ENST00000357376 TRIM27P14373 513 aa8.51□□□□□ -1.05
RTN4-203ENST00000357376 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
RTN4-203ENST00000357376 DDX49Q9Y6V7 483 aaKnown RBP8.51□□□□□ -1.05
RTN4-203ENST00000357376 PLCH2O75038 1416 aa8.5□□□□□ -1.05
RTN4-203ENST00000357376 CABP1Q9NZU7 370 aa8.5□□□□□ -1.05
RTN4-203ENST00000357376 PIK3C2GO75747 1445 aa8.5□□□□□ -1.05
RTN4-203ENST00000357376 MCM4P33991 863 aa8.5□□□□□ -1.05
RTN4-203ENST00000357376 PLA2R1Q13018 1463 aa8.5□□□□□ -1.05
RTN4-203ENST00000357376 PLCB2Q00722 1185 aa8.5□□□□□ -1.05
RTN4-203ENST00000357376 FBLN1P23142 703 aa8.49□□□□□ -1.05
RTN4-203ENST00000357376 MSNP26038 577 aaKnown RBP8.49□□□□□ -1.05
RTN4-203ENST00000357376 RTF1Q92541 710 aaKnown RBP8.49□□□□□ -1.05
RTN4-203ENST00000357376 FOXD4L6Q3SYB3 417 aaPredicted RBP8.49□□□□□ -1.05
RTN4-203ENST00000357376 FOXD4L3Q6VB84 417 aaPredicted RBP8.49□□□□□ -1.05
RTN4-203ENST00000357376 TBC1D32Q96NH3 1257 aa8.49□□□□□ -1.05
RTN4-203ENST00000357376 EIF2AK4Q9P2K8 1649 aaKnown RBP8.49□□□□□ -1.05
RTN4-203ENST00000357376 COG3Q96JB2 828 aa8.48□□□□□ -1.05
RTN4-203ENST00000357376 ADGRL1O94910 1474 aa8.48□□□□□ -1.05
RTN4-203ENST00000357376 KDM5DQ9BY66 1539 aa8.48□□□□□ -1.05
RTN4-203ENST00000357376 LMOD3Q0VAK6 560 aa8.48□□□□□ -1.05
RTN4-203ENST00000357376 TRIM6-TRIM34B2RNG4 842 aa8.48□□□□□ -1.05
RTN4-203ENST00000357376 DNTTIP2Q5QJE6 756 aaKnown RBP8.48□□□□□ -1.05
RTN4-203ENST00000357376 CHD1LQ86WJ1 897 aa8.48□□□□□ -1.05
RTN4-203ENST00000357376 FAM43AQ8N2R8 423 aa8.48□□□□□ -1.05
RTN4-203ENST00000357376 FANCAO15360 1455 aa8.47□□□□□ -1.05
RTN4-203ENST00000357376 ARID3AQ99856 593 aa8.47□□□□□ -1.05
RTN4-203ENST00000357376 CDK19Q9BWU1 502 aa8.47□□□□□ -1.05
RTN4-203ENST00000357376 ZNF521Q96K83 1311 aa8.47□□□□□ -1.05
RTN4-203ENST00000357376 SAMD9LQ8IVG5 1584 aa8.47□□□□□ -1.05
RTN4-203ENST00000357376 GNAI1P63096 354 aa8.47□□□□□ -1.05
RTN4-203ENST00000357376 HAP1P54257 671 aaPredicted RBP8.47□□□□□ -1.05
RTN4-203ENST00000357376 NECTIN2Q92692 538 aa8.47□□□□□ -1.05
RTN4-203ENST00000357376 C14orf93Q9H972 538 aaKnown RBP8.47□□□□□ -1.05
RTN4-203ENST00000357376 TWISTNBQ3B726 338 aaPredicted RBP8.46□□□□□ -1.05
RTN4-203ENST00000357376 WDR7Q9Y4E6 1490 aa8.46□□□□□ -1.05
RTN4-203ENST00000357376 POLR3AO14802 1390 aaPredicted RBP8.46□□□□□ -1.06
RTN4-203ENST00000357376 MRE11P49959 708 aa8.46□□□□□ -1.06
RTN4-203ENST00000357376 OS9Q13438 667 aaPredicted RBP8.46□□□□□ -1.06
RTN4-203ENST00000357376 API5Q9BZZ5 524 aaKnown RBP8.46□□□□□ -1.06
RTN4-203ENST00000357376 ABCA8O94911 1581 aa8.46□□□□□ -1.06
RTN4-203ENST00000357376 ST18O60284 1047 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 CT47B1P0C2W7 299 aaPredicted RBP8.45□□□□□ -1.06
RTN4-203ENST00000357376 MCTP1Q6DN14 999 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 ARHGEF5Q12774 1597 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 MAST1Q9Y2H9 1570 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 PTMSP20962 102 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 MCCP23508 829 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 IDI1Q13907 227 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 DCTN1Q14203 1278 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 RRS1Q15050 365 aaKnown RBP8.45□□□□□ -1.06
RTN4-203ENST00000357376 RILPL2Q969X0 211 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 LTV1Q96GA3 475 aaPredicted RBP8.45□□□□□ -1.06
RTN4-203ENST00000357376 STK31Q9BXU1 1019 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 INSRP06213 1382 aa8.45□□□□□ -1.06
RTN4-203ENST00000357376 HMMRO75330 724 aa8.44□□□□□ -1.06
RTN4-203ENST00000357376 CDC45O75419 566 aa8.44□□□□□ -1.06
RTN4-203ENST00000357376 CFAP44Q96MT7 982 aa8.44□□□□□ -1.06
RTN4-203ENST00000357376 CDC42BPAQ5VT25 1732 aa8.44□□□□□ -1.06
RTN4-203ENST00000357376 SKOR2Q2VWA4 1001 aaPredicted RBP8.44□□□□□ -1.06
RTN4-203ENST00000357376 WAPLQ7Z5K2 1190 aa8.44□□□□□ -1.06
RTN4-203ENST00000357376 PANK2Q9BZ23 570 aa8.44□□□□□ -1.06
RTN4-203ENST00000357376 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.43□□□□□ -1.063e-14■□□□□ 8.3
RTN4-203ENST00000357376 RPGRIP1LQ68CZ1 1315 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms