RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 SPATA31A6Q5VVP1 1343 aa24.92■■□□□ 1.58
NCL-202ENST00000356936 PLEKHH1Q9ULM0 1364 aa24.92■■□□□ 1.58
NCL-202ENST00000356936 TRIM26Q12899 539 aaPredicted RBP24.91■■□□□ 1.58
NCL-202ENST00000356936 NHSL1Q5SYE7 1610 aa24.9■■□□□ 1.58
NCL-202ENST00000356936 ADGRB1O14514 1584 aa24.89■■□□□ 1.58
NCL-202ENST00000356936 LRRC59Q96AG4 307 aaKnown RBP24.89■■□□□ 1.58
NCL-202ENST00000356936 DLC1Q96QB1 1528 aa24.89■■□□□ 1.57
NCL-202ENST00000356936 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
NCL-202ENST00000356936 ORAI2Q96SN7 254 aa24.88■■□□□ 1.57
NCL-202ENST00000356936 POGKQ9P215 609 aa24.87■■□□□ 1.57
NCL-202ENST00000356936 ESCO1Q5FWF5 840 aa24.86■■□□□ 1.57
NCL-202ENST00000356936 SHPRHQ149N8 1683 aa24.85■■□□□ 1.57
NCL-202ENST00000356936 TRAK1Q9UPV9 953 aa24.84■■□□□ 1.57
NCL-202ENST00000356936 DDX17Q92841 729 aaKnown RBP24.83■■□□□ 1.57
NCL-202ENST00000356936 NPHP3Q7Z494 1330 aa24.82■■□□□ 1.56
NCL-202ENST00000356936 SAFB2Q14151 953 aaKnown RBP eCLIP24.81■■□□□ 1.56
NCL-202ENST00000356936 SOS2Q07890 1332 aaPredicted RBP24.81■■□□□ 1.56
NCL-202ENST00000356936 NUTM2FA1L443 756 aa24.8■■□□□ 1.56
NCL-202ENST00000356936 MEX3CQ5U5Q3 659 aaKnown RBP24.8■■□□□ 1.56
NCL-202ENST00000356936 FMN2Q9NZ56 1722 aa24.79■■□□□ 1.56
NCL-202ENST00000356936 SOCS7O14512 581 aa24.79■■□□□ 1.56
NCL-202ENST00000356936 RGS17Q9UGC6 210 aaPredicted RBP24.78■■□□□ 1.56
NCL-202ENST00000356936 KIAA1210Q9ULL0 1709 aa24.77■■□□□ 1.56
NCL-202ENST00000356936 LRP6O75581 1613 aa24.76■■□□□ 1.55
NCL-202ENST00000356936 SIN3AQ96ST3 1273 aa24.76■■□□□ 1.55
NCL-202ENST00000356936 PNPLA6Q8IY17 1366 aa24.76■■□□□ 1.55
NCL-202ENST00000356936 NUTM2BA6NNL0 878 aaPredicted RBP24.75■■□□□ 1.55
NCL-202ENST00000356936 NUTM2EB1AL46 878 aaPredicted RBP24.75■■□□□ 1.55
NCL-202ENST00000356936 FOXO3O43524 673 aa24.75■■□□□ 1.55
NCL-202ENST00000356936 NEUROD1Q13562 356 aa24.75■■□□□ 1.55
NCL-202ENST00000356936 NUTM2AQ8IVF1 878 aaPredicted RBP24.75■■□□□ 1.55
NCL-202ENST00000356936 L3MBTL2Q969R5 705 aa24.75■■□□□ 1.55
NCL-202ENST00000356936 ADGRB2O60241 1585 aa24.75■■□□□ 1.55
NCL-202ENST00000356936 EIF3AQ14152 1382 aaKnown RBP24.74■■□□□ 1.55
NCL-202ENST00000356936 KIF1AQ12756 1690 aa24.72■■□□□ 1.55
NCL-202ENST00000356936 ANKARQ7Z5J8 1434 aa24.72■■□□□ 1.55
NCL-202ENST00000356936 MINK1Q8N4C8 1332 aaPredicted RBP24.71■■□□□ 1.55
NCL-202ENST00000356936 PXDNQ92626 1479 aa24.7■■□□□ 1.55
NCL-202ENST00000356936 HIRIP3Q9BW71 556 aaPredicted RBP24.7■■□□□ 1.54
NCL-202ENST00000356936 PHF8Q9UPP1 1060 aa24.7■■□□□ 1.54
NCL-202ENST00000356936 ZNF772Q68DY9 489 aaPredicted RBP24.69■■□□□ 1.54
NCL-202ENST00000356936 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
NCL-202ENST00000356936 NBPF1Q3BBV0 1214 aa24.68■■□□□ 1.54
NCL-202ENST00000356936 ARHGEF28Q8N1W1 1705 aaKnown RBP24.68■■□□□ 1.54
NCL-202ENST00000356936 XPCQ01831 940 aaPredicted RBP24.67■■□□□ 1.54
NCL-202ENST00000356936 PSME1Q06323 249 aa24.66■■□□□ 1.54
NCL-202ENST00000356936 POTEAQ6S8J7 498 aa24.66■■□□□ 1.54
NCL-202ENST00000356936 TULP4Q9NRJ4 1543 aa24.65■■□□□ 1.54
NCL-202ENST00000356936 KRT28Q7Z3Y7 464 aa24.64■■□□□ 1.54
NCL-202ENST00000356936 COL22A1Q8NFW1 1626 aaPredicted RBP24.63■■□□□ 1.53
NCL-202ENST00000356936 USP32Q8NFA0 1604 aa24.61■■□□□ 1.53
NCL-202ENST00000356936 C8orf37Q96NL8 207 aa24.61■■□□□ 1.53
NCL-202ENST00000356936 SPATA31A3Q5VYP0 1347 aa24.61■■□□□ 1.53
NCL-202ENST00000356936 RGPD8O14715 1765 aaPredicted RBP24.6■■□□□ 1.53
NCL-202ENST00000356936 TONSLQ96HA7 1378 aa24.59■■□□□ 1.53
NCL-202ENST00000356936 ADAMTS2O95450 1211 aa24.59■■□□□ 1.53
NCL-202ENST00000356936 PMFBP1Q8TBY8 1022 aa24.59■■□□□ 1.53
NCL-202ENST00000356936 AFF2P51816 1311 aa24.59■■□□□ 1.53
NCL-202ENST00000356936 CENPJQ9HC77 1338 aaPredicted RBP24.59■■□□□ 1.53
NCL-202ENST00000356936 SBNO1A3KN83 1393 aa24.58■■□□□ 1.53
NCL-202ENST00000356936 PRR36Q9H6K5 1346 aa24.58■■□□□ 1.52
NCL-202ENST00000356936 ROCK2O75116 1388 aaKnown RBP24.57■■□□□ 1.52
NCL-202ENST00000356936 NGLY1Q96IV0 654 aa24.57■■□□□ 1.52
NCL-202ENST00000356936 TRPM1Q7Z4N2 1603 aa24.57■■□□□ 1.52
NCL-202ENST00000356936 GPRASP1Q5JY77 1395 aa24.56■■□□□ 1.52
NCL-202ENST00000356936 TNS3Q68CZ2 1445 aa24.56■■□□□ 1.52
NCL-202ENST00000356936 CDK19Q9BWU1 502 aa24.56■■□□□ 1.52
NCL-202ENST00000356936 NUDT16Q96DE0 195 aaKnown RBP24.55■■□□□ 1.52
NCL-202ENST00000356936 ARHGEF10O15013 1369 aa24.54■■□□□ 1.52
NCL-202ENST00000356936 NGDNQ8NEJ9 315 aaKnown RBP24.54■■□□□ 1.52
NCL-202ENST00000356936 ATP7BP35670 1465 aa24.53■■□□□ 1.52
NCL-202ENST00000356936 RXRBP28702 533 aa24.52■■□□□ 1.52
NCL-202ENST00000356936 LMOD2Q6P5Q4 547 aa24.51■■□□□ 1.51
NCL-202ENST00000356936 CCDC61Q9Y6R9 512 aa24.51■■□□□ 1.51
NCL-202ENST00000356936 ITSN1Q15811 1721 aa24.51■■□□□ 1.51
NCL-202ENST00000356936 HAP1P54257 671 aaPredicted RBP24.49■■□□□ 1.51
NCL-202ENST00000356936 SRPK2P78362 688 aaKnown RBP24.49■■□□□ 1.51
NCL-202ENST00000356936 NBPF8Q3BBV2 869 aa24.49■■□□□ 1.51
NCL-202ENST00000356936 FNBP4Q8N3X1 1017 aaPredicted RBP24.49■■□□□ 1.51
NCL-202ENST00000356936 QTRT2Q9H974 415 aaKnown RBP24.48■■□□□ 1.51
NCL-202ENST00000356936 QRICH2Q9H0J4 1663 aa24.47■■□□□ 1.51
NCL-202ENST00000356936 USP21Q9UK80 565 aa24.47■■□□□ 1.51
NCL-202ENST00000356936 PLEKHG3A1L390 1219 aa24.45■■□□□ 1.5
NCL-202ENST00000356936 CDK12Q9NYV4 1490 aaPredicted RBP24.45■■□□□ 1.5
NCL-202ENST00000356936 EVC2Q86UK5 1308 aa24.44■■□□□ 1.5
NCL-202ENST00000356936 RBM6P78332 1123 aaKnown RBP24.44■■□□□ 1.5
NCL-202ENST00000356936 CARD11Q9BXL7 1154 aa24.44■■□□□ 1.5
NCL-202ENST00000356936 TRPC5Q9UL62 973 aaPredicted RBP24.44■■□□□ 1.5
NCL-202ENST00000356936 TRPM3Q9HCF6 1732 aaPredicted RBP24.44■■□□□ 1.5
NCL-202ENST00000356936 POLR3AO14802 1390 aaPredicted RBP24.43■■□□□ 1.5
NCL-202ENST00000356936 PAK3O75914 559 aaPredicted RBP24.43■■□□□ 1.5
NCL-202ENST00000356936 TOPAZ1Q8N9V7 1692 aa24.43■■□□□ 1.5
NCL-202ENST00000356936 ACEP12821 1306 aa24.42■■□□□ 1.5
NCL-202ENST00000356936 MARF1Q9Y4F3 1742 aaKnown RBP24.42■■□□□ 1.5
NCL-202ENST00000356936 CABP2Q9NPB3 220 aa24.42■■□□□ 1.5
NCL-202ENST00000356936 RALGAPBQ86X10 1494 aa24.42■■□□□ 1.5
NCL-202ENST00000356936 CABLES1Q8TDN4 633 aa24.41■■□□□ 1.5
NCL-202ENST00000356936 PCGF6Q9BYE7 350 aa24.41■■□□□ 1.5
NCL-202ENST00000356936 CLSPNQ9HAW4 1339 aa24.4■■□□□ 1.5
NCL-202ENST00000356936 PPIP5K1Q6PFW1 1433 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms