RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 HRCP23327 699 aa24.71■■□□□ 1.55
PDLIM7-201ENST00000355572 ORAI2Q96SN7 254 aa24.71■■□□□ 1.55
PDLIM7-201ENST00000355572 ABCC11Q96J66 1382 aa24.7■■□□□ 1.55
PDLIM7-201ENST00000355572 FMN2Q9NZ56 1722 aa24.7■■□□□ 1.54
PDLIM7-201ENST00000355572 POTEAQ6S8J7 498 aa24.7■■□□□ 1.54
PDLIM7-201ENST00000355572 C14orf93Q9H972 538 aaKnown RBP24.7■■□□□ 1.54
PDLIM7-201ENST00000355572 ADGRB1O14514 1584 aa24.69■■□□□ 1.54
PDLIM7-201ENST00000355572 DHX57Q6P158 1386 aaKnown RBP24.67■■□□□ 1.54
PDLIM7-201ENST00000355572 SPATA31A6Q5VVP1 1343 aa24.62■■□□□ 1.53
PDLIM7-201ENST00000355572 NUTM2FA1L443 756 aa24.62■■□□□ 1.53
PDLIM7-201ENST00000355572 PNPLA6Q8IY17 1366 aa24.62■■□□□ 1.53
PDLIM7-201ENST00000355572 KDM2AQ9Y2K7 1162 aa24.61■■□□□ 1.53
PDLIM7-201ENST00000355572 DCAF11Q8TEB1 546 aa24.59■■□□□ 1.53
PDLIM7-201ENST00000355572 USP32Q8NFA0 1604 aa24.59■■□□□ 1.53
PDLIM7-201ENST00000355572 DLC1Q96QB1 1528 aa24.58■■□□□ 1.53
PDLIM7-201ENST00000355572 NUTM2BA6NNL0 878 aaPredicted RBP24.58■■□□□ 1.53
PDLIM7-201ENST00000355572 NUTM2EB1AL46 878 aaPredicted RBP24.58■■□□□ 1.53
PDLIM7-201ENST00000355572 NUTM2AQ8IVF1 878 aaPredicted RBP24.58■■□□□ 1.53
PDLIM7-201ENST00000355572 SOS2Q07890 1332 aaPredicted RBP24.58■■□□□ 1.52
PDLIM7-201ENST00000355572 PXDNQ92626 1479 aa24.58■■□□□ 1.52
PDLIM7-201ENST00000355572 ARHGEF28Q8N1W1 1705 aaKnown RBP24.57■■□□□ 1.52
PDLIM7-201ENST00000355572 COL22A1Q8NFW1 1626 aaPredicted RBP24.55■■□□□ 1.52
PDLIM7-201ENST00000355572 SAFB2Q14151 953 aaKnown RBP eCLIP24.55■■□□□ 1.52
PDLIM7-201ENST00000355572 LRRC59Q96AG4 307 aaKnown RBP24.54■■□□□ 1.52
PDLIM7-201ENST00000355572 XPCQ01831 940 aaPredicted RBP24.53■■□□□ 1.52
PDLIM7-201ENST00000355572 ESCO1Q5FWF5 840 aa24.53■■□□□ 1.52
PDLIM7-201ENST00000355572 SIRT1Q96EB6 747 aa24.53■■□□□ 1.52
PDLIM7-201ENST00000355572 PRAM1Q96QH2 718 aa24.53■■□□□ 1.52
PDLIM7-201ENST00000355572 ADGRB2O60241 1585 aa24.53■■□□□ 1.52
PDLIM7-201ENST00000355572 KIF1AQ12756 1690 aa24.52■■□□□ 1.52
PDLIM7-201ENST00000355572 MEX3CQ5U5Q3 659 aaKnown RBP24.5■■□□□ 1.51
PDLIM7-201ENST00000355572 FOXO3O43524 673 aa24.49■■□□□ 1.51
PDLIM7-201ENST00000355572 TRAK1Q9UPV9 953 aa24.49■■□□□ 1.51
PDLIM7-201ENST00000355572 MARF1Q9Y4F3 1742 aaKnown RBP24.49■■□□□ 1.51
PDLIM7-201ENST00000355572 KIAA1210Q9ULL0 1709 aa24.48■■□□□ 1.51
PDLIM7-201ENST00000355572 AFF2P51816 1311 aa24.44■■□□□ 1.5
PDLIM7-201ENST00000355572 HIRIP3Q9BW71 556 aaPredicted RBP24.44■■□□□ 1.5
PDLIM7-201ENST00000355572 NPHP3Q7Z494 1330 aa24.43■■□□□ 1.5
PDLIM7-201ENST00000355572 ABCA3Q99758 1704 aa24.41■■□□□ 1.5
PDLIM7-201ENST00000355572 MINK1Q8N4C8 1332 aaPredicted RBP24.41■■□□□ 1.5
PDLIM7-201ENST00000355572 PRR36Q9H6K5 1346 aa24.41■■□□□ 1.5
PDLIM7-201ENST00000355572 ADAMTS2O95450 1211 aa24.41■■□□□ 1.5
PDLIM7-201ENST00000355572 C8orf37Q96NL8 207 aa24.41■■□□□ 1.5
PDLIM7-201ENST00000355572 SIN3AQ96ST3 1273 aa24.41■■□□□ 1.5
PDLIM7-201ENST00000355572 POGKQ9P215 609 aa24.41■■□□□ 1.5
PDLIM7-201ENST00000355572 TRPM3Q9HCF6 1732 aaPredicted RBP24.41■■□□□ 1.5
PDLIM7-201ENST00000355572 NBPF1Q3BBV0 1214 aa24.39■■□□□ 1.49
PDLIM7-201ENST00000355572 ZNF772Q68DY9 489 aaPredicted RBP24.38■■□□□ 1.49
PDLIM7-201ENST00000355572 TULP4Q9NRJ4 1543 aa24.37■■□□□ 1.49
PDLIM7-201ENST00000355572 STAC3Q96MF2 364 aa24.37■■□□□ 1.49
PDLIM7-201ENST00000355572 PHF8Q9UPP1 1060 aa24.36■■□□□ 1.49
PDLIM7-201ENST00000355572 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
PDLIM7-201ENST00000355572 ANKARQ7Z5J8 1434 aa24.35■■□□□ 1.49
PDLIM7-201ENST00000355572 TRPM1Q7Z4N2 1603 aa24.35■■□□□ 1.49
PDLIM7-201ENST00000355572 KRT28Q7Z3Y7 464 aa24.34■■□□□ 1.49
PDLIM7-201ENST00000355572 PMFBP1Q8TBY8 1022 aa24.34■■□□□ 1.49
PDLIM7-201ENST00000355572 TOPAZ1Q8N9V7 1692 aa24.34■■□□□ 1.49
PDLIM7-201ENST00000355572 ALS2Q96Q42 1657 aa24.34■■□□□ 1.49
PDLIM7-201ENST00000355572 L3MBTL2Q969R5 705 aa24.33■■□□□ 1.49
PDLIM7-201ENST00000355572 ITSN1Q15811 1721 aa24.32■■□□□ 1.48
PDLIM7-201ENST00000355572 ATP7BP35670 1465 aa24.32■■□□□ 1.48
PDLIM7-201ENST00000355572 TNS3Q68CZ2 1445 aa24.31■■□□□ 1.48
PDLIM7-201ENST00000355572 CRYBG1Q9Y4K1 1723 aa24.31■■□□□ 1.48
PDLIM7-201ENST00000355572 RGS12O14924 1447 aa24.3■■□□□ 1.48
PDLIM7-201ENST00000355572 WASLO00401 505 aaPredicted RBP24.3■■□□□ 1.48
PDLIM7-201ENST00000355572 NGLY1Q96IV0 654 aa24.3■■□□□ 1.48
PDLIM7-201ENST00000355572 QRICH2Q9H0J4 1663 aa24.29■■□□□ 1.48
PDLIM7-201ENST00000355572 QTRT2Q9H974 415 aaKnown RBP24.28■■□□□ 1.48
PDLIM7-201ENST00000355572 BCL9LQ86UU0 1499 aa24.27■■□□□ 1.48
PDLIM7-201ENST00000355572 RXRBP28702 533 aa24.27■■□□□ 1.48
PDLIM7-201ENST00000355572 CABLES1Q8TDN4 633 aa24.27■■□□□ 1.48
PDLIM7-201ENST00000355572 PLCH1Q4KWH8 1693 aa24.27■■□□□ 1.48
PDLIM7-201ENST00000355572 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.27■■□□□ 1.48
PDLIM7-201ENST00000355572 CDK12Q9NYV4 1490 aaPredicted RBP24.26■■□□□ 1.47
PDLIM7-201ENST00000355572 NEUROD1Q13562 356 aa24.26■■□□□ 1.47
PDLIM7-201ENST00000355572 FNBP4Q8N3X1 1017 aaPredicted RBP24.26■■□□□ 1.47
PDLIM7-201ENST00000355572 PLEKHG5O94827 1062 aa24.25■■□□□ 1.47
PDLIM7-201ENST00000355572 SBNO1A3KN83 1393 aa24.25■■□□□ 1.47
PDLIM7-201ENST00000355572 ATRNO75882 1429 aa24.25■■□□□ 1.47
PDLIM7-201ENST00000355572 USP21Q9UK80 565 aa24.24■■□□□ 1.47
PDLIM7-201ENST00000355572 SLIT2O94813 1529 aa24.21■■□□□ 1.47
PDLIM7-201ENST00000355572 PSME1Q06323 249 aa24.21■■□□□ 1.47
PDLIM7-201ENST00000355572 GLI3P10071 1580 aa24.2■■□□□ 1.47
PDLIM7-201ENST00000355572 RBM6P78332 1123 aaKnown RBP24.2■■□□□ 1.46
PDLIM7-201ENST00000355572 NUDT16Q96DE0 195 aaKnown RBP24.2■■□□□ 1.46
PDLIM7-201ENST00000355572 CDK19Q9BWU1 502 aa24.2■■□□□ 1.46
PDLIM7-201ENST00000355572 NBPF8Q3BBV2 869 aa24.19■■□□□ 1.46
PDLIM7-201ENST00000355572 EIF3AQ14152 1382 aaKnown RBP24.18■■□□□ 1.46
PDLIM7-201ENST00000355572 NRAPQ86VF7 1730 aa24.18■■□□□ 1.46
PDLIM7-201ENST00000355572 LMOD2Q6P5Q4 547 aa24.17■■□□□ 1.46
PDLIM7-201ENST00000355572 NWD2Q9ULI1 1742 aa24.17■■□□□ 1.46
PDLIM7-201ENST00000355572 PHRF1Q9P1Y6 1649 aaKnown RBP24.17■■□□□ 1.46
PDLIM7-201ENST00000355572 UPF1Q92900 1129 aaKnown RBP eCLIP24.16■■□□□ 1.46
PDLIM7-201ENST00000355572 BRWD3Q6RI45 1802 aa24.15■■□□□ 1.46
PDLIM7-201ENST00000355572 TRPC5Q9UL62 973 aaPredicted RBP24.15■■□□□ 1.46
PDLIM7-201ENST00000355572 CENPJQ9HC77 1338 aaPredicted RBP24.14■■□□□ 1.46
PDLIM7-201ENST00000355572 ARHGEF10O15013 1369 aa24.14■■□□□ 1.45
PDLIM7-201ENST00000355572 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
PDLIM7-201ENST00000355572 GPRASP1Q5JY77 1395 aa24.13■■□□□ 1.45
PDLIM7-201ENST00000355572 NGDNQ8NEJ9 315 aaKnown RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms