RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 TWISTNBQ3B726 338 aaPredicted RBP15.03■□□□□ -0
TRPM3-201ENST00000354500 ISY1Q9ULR0 285 aaKnown RBP15.03■□□□□ -0
TRPM3-201ENST00000354500 KIAA2012Q0VF49 1180 aa15.03■□□□□ -0
TRPM3-201ENST00000354500 AIMP1Q12904 312 aaKnown RBP15.03■□□□□ -0
TRPM3-201ENST00000354500 PTPN23Q9H3S7 1636 aa15.03■□□□□ -0
TRPM3-201ENST00000354500 EVA1CP58658 441 aa15.02■□□□□ -0
TRPM3-201ENST00000354500 HECW1Q76N89 1606 aa15.02□□□□□ -0.01
TRPM3-201ENST00000354500 WAPLQ7Z5K2 1190 aa15.02□□□□□ -0.01
TRPM3-201ENST00000354500 DCTN1Q14203 1278 aa15.01□□□□□ -0.01
TRPM3-201ENST00000354500 GPATCH3Q96I76 525 aa15.01□□□□□ -0.01
TRPM3-201ENST00000354500 URB2Q14146 1524 aaKnown RBP15.01□□□□□ -0.01
TRPM3-201ENST00000354500 MCTP1Q6DN14 999 aa15.01□□□□□ -0.01
TRPM3-201ENST00000354500 C1orf141Q5JVX7 400 aa15.01□□□□□ -0.01
TRPM3-201ENST00000354500 SYTL4Q96C24 671 aaPredicted RBP15.01□□□□□ -0.01
TRPM3-201ENST00000354500 CHAF1AQ13111 956 aaPredicted RBP15□□□□□ -0.01
TRPM3-201ENST00000354500 CAMSAP2Q08AD1 1489 aa15□□□□□ -0.01
TRPM3-201ENST00000354500 REC8O95072 547 aa15□□□□□ -0.01
TRPM3-201ENST00000354500 SYAP1Q96A49 352 aaPredicted RBP15□□□□□ -0.01
TRPM3-201ENST00000354500 DIAPH3Q9NSV4 1193 aa15□□□□□ -0.01
TRPM3-201ENST00000354500 ATF7IPQ6VMQ6 1270 aa15□□□□□ -0.01
TRPM3-201ENST00000354500 MIS18AQ9NYP9 233 aa14.99□□□□□ -0.01
TRPM3-201ENST00000354500 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
TRPM3-201ENST00000354500 TOMM22Q9NS69 142 aa14.99□□□□□ -0.01
TRPM3-201ENST00000354500 DISP3Q9P2K9 1392 aa14.99□□□□□ -0.01
TRPM3-201ENST00000354500 IQGAP2Q13576 1575 aa14.99□□□□□ -0.01
TRPM3-201ENST00000354500 GTF2E1P29083 439 aaPredicted RBP14.98□□□□□ -0.01
TRPM3-201ENST00000354500 DUSP27Q5VZP5 1158 aa14.98□□□□□ -0.01
TRPM3-201ENST00000354500 RNF214Q8ND24 703 aa14.98□□□□□ -0.01
TRPM3-201ENST00000354500 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
TRPM3-201ENST00000354500 MVPQ14764 893 aaKnown RBP14.98□□□□□ -0.01
TRPM3-201ENST00000354500 TMEM57Q8N5G2 664 aa14.98□□□□□ -0.01
TRPM3-201ENST00000354500 NSD3Q9BZ95 1437 aa14.97□□□□□ -0.01
TRPM3-201ENST00000354500 MAGI1Q96QZ7 1491 aaPredicted RBP14.97□□□□□ -0.01
TRPM3-201ENST00000354500 TRAK2O60296 914 aa14.97□□□□□ -0.01
TRPM3-201ENST00000354500 PTMSP20962 102 aa14.97□□□□□ -0.01
TRPM3-201ENST00000354500 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
TRPM3-201ENST00000354500 FOSBP53539 338 aa14.96□□□□□ -0.01
TRPM3-201ENST00000354500 SSH1Q8WYL5 1049 aa14.96□□□□□ -0.01
TRPM3-201ENST00000354500 CDK11BP21127 795 aaKnown RBP14.96□□□□□ -0.01
TRPM3-201ENST00000354500 INTS3Q68E01 1043 aaKnown RBP14.96□□□□□ -0.02
TRPM3-201ENST00000354500 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
TRPM3-201ENST00000354500 VPS37CA5D8V6 355 aaPredicted RBP14.95□□□□□ -0.02
TRPM3-201ENST00000354500 SURF6O75683 361 aaKnown RBP14.95□□□□□ -0.02
TRPM3-201ENST00000354500 NLRP2Q9NX02 1062 aa14.95□□□□□ -0.02
TRPM3-201ENST00000354500 MAP3K1Q13233 1512 aa14.95□□□□□ -0.02
TRPM3-201ENST00000354500 IFIT2P09913 472 aaKnown RBP14.95□□□□□ -0.02
TRPM3-201ENST00000354500 MPNDQ8N594 471 aa14.95□□□□□ -0.02
TRPM3-201ENST00000354500 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
TRPM3-201ENST00000354500 NEK4P51957 841 aa14.95□□□□□ -0.02
TRPM3-201ENST00000354500 RARSP54136 660 aaKnown RBP14.95□□□□□ -0.02
TRPM3-201ENST00000354500 ABTB2Q8N961 1025 aa14.95□□□□□ -0.02
TRPM3-201ENST00000354500 GOLGA6L6A8MZA4 724 aa14.94□□□□□ -0.02
TRPM3-201ENST00000354500 CDC45O75419 566 aa14.94□□□□□ -0.02
TRPM3-201ENST00000354500 FBXO31Q5XUX0 539 aaPredicted RBP14.94□□□□□ -0.02
TRPM3-201ENST00000354500 NRDCO43847 1150 aa14.94□□□□□ -0.02
TRPM3-201ENST00000354500 WDR63Q8IWG1 891 aa14.94□□□□□ -0.02
TRPM3-201ENST00000354500 CHMP4AQ9BY43 222 aa14.94□□□□□ -0.02
TRPM3-201ENST00000354500 ATF3P18847 181 aa14.94□□□□□ -0.02
TRPM3-201ENST00000354500 ESCO1Q5FWF5 840 aa14.94□□□□□ -0.02
TRPM3-201ENST00000354500 BCL11BQ9C0K0 894 aaPredicted RBP14.93□□□□□ -0.02
TRPM3-201ENST00000354500 UBTFL1P0CB47 393 aaPredicted RBP14.93□□□□□ -0.02
TRPM3-201ENST00000354500 IGHDP01880 384 aa14.92□□□□□ -0.02
TRPM3-201ENST00000354500 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
TRPM3-201ENST00000354500 HDAC5Q9UQL6 1122 aa14.92□□□□□ -0.02
TRPM3-201ENST00000354500 CREBRFQ8IUR6 639 aa14.92□□□□□ -0.02
TRPM3-201ENST00000354500 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
TRPM3-201ENST00000354500 MAP4K4O95819 1239 aaPredicted RBP14.92□□□□□ -0.02
TRPM3-201ENST00000354500 NEXNQ0ZGT2 675 aa14.92□□□□□ -0.02
TRPM3-201ENST00000354500 IDI1Q13907 227 aa14.92□□□□□ -0.02
TRPM3-201ENST00000354500 H3BQV1 296 aa14.91□□□□□ -0.02
TRPM3-201ENST00000354500 SF3A1Q15459 793 aaKnown RBP14.91□□□□□ -0.02
TRPM3-201ENST00000354500 IFFO2Q5TF58 517 aa14.91□□□□□ -0.02
TRPM3-201ENST00000354500 FBXW7Q969H0 707 aa14.91□□□□□ -0.02
TRPM3-201ENST00000354500 EMILIN1Q9Y6C2 1016 aa14.91□□□□□ -0.02
TRPM3-201ENST00000354500 CCDC141Q6ZP82 1450 aa14.91□□□□□ -0.02
TRPM3-201ENST00000354500 SKOR2Q2VWA4 1001 aaPredicted RBP14.91□□□□□ -0.02
TRPM3-201ENST00000354500 CAVIN1Q6NZI2 390 aaKnown RBP14.91□□□□□ -0.02
TRPM3-201ENST00000354500 MCM10Q7L590 875 aa14.91□□□□□ -0.02
TRPM3-201ENST00000354500 PROSER2Q86WR7 435 aaPredicted RBP14.91□□□□□ -0.02
TRPM3-201ENST00000354500 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
TRPM3-201ENST00000354500 XPCQ01831 940 aaPredicted RBP14.9□□□□□ -0.02
TRPM3-201ENST00000354500 TTC5Q8N0Z6 440 aa14.9□□□□□ -0.02
TRPM3-201ENST00000354500 FAM184AQ8NB25 1140 aa14.9□□□□□ -0.02
TRPM3-201ENST00000354500 TNNQ9UQP3 1299 aa14.9□□□□□ -0.02
TRPM3-201ENST00000354500 CCDC27Q2M243 656 aa14.9□□□□□ -0.02
TRPM3-201ENST00000354500 G3BP1Q13283 466 aaKnown RBP eCLIP14.9□□□□□ -0.02
TRPM3-201ENST00000354500 NME9Q86XW9 330 aa14.9□□□□□ -0.02
TRPM3-201ENST00000354500 ZKSCAN1P17029 563 aaPredicted RBP14.89□□□□□ -0.03
TRPM3-201ENST00000354500 CHD1LQ86WJ1 897 aa14.89□□□□□ -0.03
TRPM3-201ENST00000354500 IL1RAPL2Q9NP60 686 aa14.89□□□□□ -0.03
TRPM3-201ENST00000354500 SLC52A1Q9NWF4 448 aa14.89□□□□□ -0.03
TRPM3-201ENST00000354500 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
TRPM3-201ENST00000354500 PRPF40AO75400 957 aaKnown RBP14.89□□□□□ -0.03
TRPM3-201ENST00000354500 CEBPAP49715 358 aaPredicted RBP14.88□□□□□ -0.03
TRPM3-201ENST00000354500 NEUROD6Q96NK8 337 aa14.88□□□□□ -0.03
TRPM3-201ENST00000354500 GPATCH8Q9UKJ3 1502 aaKnown RBP14.88□□□□□ -0.03
TRPM3-201ENST00000354500 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
TRPM3-201ENST00000354500 RAPGEF4Q8WZA2 1011 aa14.88□□□□□ -0.03
TRPM3-201ENST00000354500 EXOC6BQ9Y2D4 811 aa14.88□□□□□ -0.03
TRPM3-201ENST00000354500 RIC3Q7Z5B4 369 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms