RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 MORC1Q86VD1 984 aa4.87□□□□□ -1.63
RNF38-203ENST00000353739 TULP4Q9NRJ4 1543 aa4.87□□□□□ -1.63
RNF38-203ENST00000353739 ANP32AP39687 249 aaKnown RBP4.87□□□□□ -1.63
RNF38-203ENST00000353739 IRX6P78412 446 aaPredicted RBP4.87□□□□□ -1.63
RNF38-203ENST00000353739 TERF2IPQ9NYB0 399 aa4.87□□□□□ -1.63
RNF38-203ENST00000353739 SHPRHQ149N8 1683 aa4.87□□□□□ -1.63
RNF38-203ENST00000353739 ATP7BP35670 1465 aa4.87□□□□□ -1.63
RNF38-203ENST00000353739 CNGB1Q14028 1251 aaPredicted RBP4.87□□□□□ -1.63
RNF38-203ENST00000353739 ALKQ9UM73 1620 aa4.87□□□□□ -1.63
RNF38-203ENST00000353739 YEATS2Q9ULM3 1422 aa4.86□□□□□ -1.63
RNF38-203ENST00000353739 CT47B1P0C2W7 299 aaPredicted RBP4.86□□□□□ -1.63
RNF38-203ENST00000353739 HDGFL2Q7Z4V5 671 aaPredicted RBP4.86□□□□□ -1.63
RNF38-203ENST00000353739 YTHDC2Q9H6S0 1430 aaKnown RBP4.86□□□□□ -1.63
RNF38-203ENST00000353739 CCDC27Q2M243 656 aa4.86□□□□□ -1.63
RNF38-203ENST00000353739 RUNDC1Q96C34 613 aa4.86□□□□□ -1.63
RNF38-203ENST00000353739 STAG3Q9UJ98 1225 aa4.86□□□□□ -1.63
RNF38-203ENST00000353739 ADAMTS8Q9UP79 889 aa4.86□□□□□ -1.63
RNF38-203ENST00000353739 IQSEC2Q5JU85 1478 aa4.86□□□□□ -1.63
RNF38-203ENST00000353739 B4GALNT3Q6L9W6 998 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 ESF1Q9H501 851 aaKnown RBP4.85□□□□□ -1.63
RNF38-203ENST00000353739 PTPRMP28827 1452 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 ADGRB2O60241 1585 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 ABCC11Q96J66 1382 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 CENPQQ7L2Z9 268 aaPredicted RBP4.85□□□□□ -1.63
RNF38-203ENST00000353739 WDR63Q8IWG1 891 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 ZNF521Q96K83 1311 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 SLFN5Q08AF3 891 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 FAM69CQ0P6D2 419 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 SIRT1Q96EB6 747 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 DDRGK1Q96HY6 314 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 MYH16Q9H6N6 1097 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 CDC42BPGQ6DT37 1551 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 TRAK1Q9UPV9 953 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 RIMS2Q9UQ26 1411 aa4.85□□□□□ -1.63
RNF38-203ENST00000353739 CPS1P31327 1500 aa4.84□□□□□ -1.63
RNF38-203ENST00000353739 RAPGEF3O95398 923 aa4.84□□□□□ -1.63
RNF38-203ENST00000353739 DIP2AQ14689 1571 aa4.84□□□□□ -1.63
RNF38-203ENST00000353739 ZMYM3Q14202 1370 aa4.84□□□□□ -1.63
RNF38-203ENST00000353739 FAM135BQ49AJ0 1406 aa4.84□□□□□ -1.63
RNF38-203ENST00000353739 NEFMP07197 916 aa4.84□□□□□ -1.63
RNF38-203ENST00000353739 POGKQ9P215 609 aa4.84□□□□□ -1.63
RNF38-203ENST00000353739 MYO5BQ9ULV0 1848 aa4.84□□□□□ -1.63
RNF38-203ENST00000353739 TRMT2AQ8IZ69 625 aaKnown RBP4.84□□□□□ -1.63
RNF38-203ENST00000353739 A2ML1A8K2U0 1454 aa4.84□□□□□ -1.63
RNF38-203ENST00000353739 SETD1AO15047 1707 aaKnown RBP4.84□□□□□ -1.64
RNF38-203ENST00000353739 NLRP1Q9C000 1473 aa4.83□□□□□ -1.64
RNF38-203ENST00000353739 CALD1Q05682 793 aaKnown RBP4.83□□□□□ -1.64
RNF38-203ENST00000353739 KIF13AQ9H1H9 1805 aa4.83□□□□□ -1.64
RNF38-203ENST00000353739 PDE3AQ14432 1141 aa4.83□□□□□ -1.64
RNF38-203ENST00000353739 DUSP27Q5VZP5 1158 aa4.83□□□□□ -1.64
RNF38-203ENST00000353739 CHMP4BQ9H444 224 aaKnown RBP4.83□□□□□ -1.64
RNF38-203ENST00000353739 IL16Q14005 1332 aa4.83□□□□□ -1.64
RNF38-203ENST00000353739 ITSN1Q15811 1721 aa4.83□□□□□ -1.64
RNF38-203ENST00000353739 PLEKHH1Q9ULM0 1364 aa4.83□□□□□ -1.64
RNF38-203ENST00000353739 CANXP27824 592 aaKnown RBP4.83□□□□□ -1.64
RNF38-203ENST00000353739 IDI1Q13907 227 aa4.83□□□□□ -1.64
RNF38-203ENST00000353739 TSPOAP1O95153 1857 aa4.83□□□□□ -1.64
RNF38-203ENST00000353739 SRPK2P78362 688 aaKnown RBP4.82□□□□□ -1.64
RNF38-203ENST00000353739 RIMS1Q86UR5 1692 aaKnown RBP4.82□□□□□ -1.64
RNF38-203ENST00000353739 EXOC6Q8TAG9 804 aa4.82□□□□□ -1.64
RNF38-203ENST00000353739 CARD14Q9BXL6 1004 aa4.82□□□□□ -1.64
RNF38-203ENST00000353739 MAPK8IP3Q9UPT6 1336 aa4.82□□□□□ -1.64
RNF38-203ENST00000353739 TECPR2O15040 1411 aa4.82□□□□□ -1.64
RNF38-203ENST00000353739 ARXQ96QS3 562 aa4.82□□□□□ -1.64
RNF38-203ENST00000353739 EDC4Q6P2E9 1401 aaKnown RBP4.82□□□□□ -1.64
RNF38-203ENST00000353739 TNRQ92752 1358 aa4.82□□□□□ -1.64
RNF38-203ENST00000353739 PMFBP1Q8TBY8 1022 aa4.82□□□□□ -1.64
RNF38-203ENST00000353739 A0A1W2PP64 1363 aa4.81□□□□□ -1.64
RNF38-203ENST00000353739 EIF5BO60841 1220 aaKnown RBP4.81□□□□□ -1.64
RNF38-203ENST00000353739 CYB5RLQ6IPT4 315 aa4.81□□□□□ -1.64
RNF38-203ENST00000353739 NOP58Q9Y2X3 529 aaKnown RBP4.81□□□□□ -1.64
RNF38-203ENST00000353739 MON2Q7Z3U7 1717 aa4.81□□□□□ -1.64
RNF38-203ENST00000353739 UBR1Q8IWV7 1749 aa4.81□□□□□ -1.64
RNF38-203ENST00000353739 CRBNQ96SW2 442 aa4.81□□□□□ -1.64
RNF38-203ENST00000353739 COL3A1P02461 1466 aaPredicted RBP4.81□□□□□ -1.64
RNF38-203ENST00000353739 AKAP12Q02952 1782 aa4.81□□□□□ -1.64
RNF38-203ENST00000353739 LMOD3Q0VAK6 560 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 ZNF428Q96B54 188 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 SALL2Q9Y467 1007 aaPredicted RBP4.8□□□□□ -1.64
RNF38-203ENST00000353739 NRXN3Q9Y4C0 1643 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 CDK12Q9NYV4 1490 aaPredicted RBP4.8□□□□□ -1.64
RNF38-203ENST00000353739 APAF1O14727 1248 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 CDCA7LQ96GN5 454 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 IPO9Q96P70 1041 aaKnown RBP4.8□□□□□ -1.64
RNF38-203ENST00000353739 TMEM132EQ6IEE7 984 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 WWC1Q8IX03 1113 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 AATKQ6ZMQ8 1374 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 LRRC7Q96NW7 1537 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 PRAM1Q96QH2 718 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 ZBTB47Q9UFB7 747 aaPredicted RBP4.8□□□□□ -1.64
RNF38-203ENST00000353739 TOPAZ1Q8N9V7 1692 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 PLEKHG1Q9ULL1 1385 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 NRKQ7Z2Y5 1582 aa4.8□□□□□ -1.64
RNF38-203ENST00000353739 HAP1P54257 671 aaPredicted RBP4.79□□□□□ -1.64
RNF38-203ENST00000353739 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
RNF38-203ENST00000353739 SLC12A5Q9H2X9 1139 aa4.79□□□□□ -1.64
RNF38-203ENST00000353739 KDM2BQ8NHM5 1336 aa4.79□□□□□ -1.64
RNF38-203ENST00000353739 ZNF692Q9BU19 519 aaPredicted RBP4.79□□□□□ -1.64
RNF38-203ENST00000353739 CDK19Q9BWU1 502 aa4.79□□□□□ -1.64
RNF38-203ENST00000353739 DIAPH1O60610 1272 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms