RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 DDX19BQ9UMR2 479 aa22.56■■□□□ 1.2
CTSB-202ENST00000353047 ABCA5Q8WWZ7 1642 aa22.56■■□□□ 1.2
CTSB-202ENST00000353047 FAM135AQ9P2D6 1515 aa22.56■■□□□ 1.2
CTSB-202ENST00000353047 TRIM27P14373 513 aa22.56■■□□□ 1.2
CTSB-202ENST00000353047 DNTTIP2Q5QJE6 756 aaKnown RBP22.55■■□□□ 1.2
CTSB-202ENST00000353047 TBC1D32Q96NH3 1257 aa22.55■■□□□ 1.2
CTSB-202ENST00000353047 SCAPERQ9BY12 1400 aa22.54■■□□□ 1.2
CTSB-202ENST00000353047 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
CTSB-202ENST00000353047 NECTIN2Q92692 538 aa22.53■■□□□ 1.2
CTSB-202ENST00000353047 MAGI2Q86UL8 1455 aa22.53■■□□□ 1.2
CTSB-202ENST00000353047 MSNP26038 577 aaKnown RBP22.52■■□□□ 1.2
CTSB-202ENST00000353047 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
CTSB-202ENST00000353047 MCTP1Q6DN14 999 aa22.51■■□□□ 1.19
CTSB-202ENST00000353047 ATF7IPQ6VMQ6 1270 aa22.51■■□□□ 1.19
CTSB-202ENST00000353047 COL17A1Q9UMD9 1497 aaPredicted RBP22.5■■□□□ 1.19
CTSB-202ENST00000353047 PRKAR2BP31323 418 aa22.5■■□□□ 1.19
CTSB-202ENST00000353047 MBD5Q9P267 1494 aa22.49■■□□□ 1.19
CTSB-202ENST00000353047 DIAPH1O60610 1272 aaKnown RBP22.49■■□□□ 1.19
CTSB-202ENST00000353047 DDX11L8A8MPP1 907 aa22.49■■□□□ 1.19
CTSB-202ENST00000353047 RNF214Q8ND24 703 aa22.49■■□□□ 1.19
CTSB-202ENST00000353047 DCTN1Q14203 1278 aa22.48■■□□□ 1.19
CTSB-202ENST00000353047 GRPEL1Q9HAV7 217 aa22.48■■□□□ 1.19
CTSB-202ENST00000353047 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
CTSB-202ENST00000353047 EVC2Q86UK5 1308 aa22.48■■□□□ 1.19
CTSB-202ENST00000353047 RBM10P98175 930 aaKnown RBP22.47■■□□□ 1.19
CTSB-202ENST00000353047 HDGFL2Q7Z4V5 671 aaPredicted RBP22.47■■□□□ 1.19
CTSB-202ENST00000353047 C14orf37Q86TY3 774 aa22.47■■□□□ 1.19
CTSB-202ENST00000353047 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
CTSB-202ENST00000353047 BLMP54132 1417 aaPredicted RBP22.47■■□□□ 1.19
CTSB-202ENST00000353047 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
CTSB-202ENST00000353047 SYCP2Q9BX26 1530 aa22.46■■□□□ 1.19
CTSB-202ENST00000353047 CALD1Q05682 793 aaKnown RBP22.46■■□□□ 1.19
CTSB-202ENST00000353047 ZNF428Q96B54 188 aa22.46■■□□□ 1.19
CTSB-202ENST00000353047 CAVIN1Q6NZI2 390 aaKnown RBP22.45■■□□□ 1.18
CTSB-202ENST00000353047 USP19O94966 1318 aa22.44■■□□□ 1.18
CTSB-202ENST00000353047 GPRASP1Q5JY77 1395 aa22.44■■□□□ 1.18
CTSB-202ENST00000353047 MRE11P49959 708 aa22.44■■□□□ 1.18
CTSB-202ENST00000353047 TNPO1Q92973 898 aaKnown RBP22.43■■□□□ 1.18
CTSB-202ENST00000353047 TERF2IPQ9NYB0 399 aa22.43■■□□□ 1.18
CTSB-202ENST00000353047 TAOK2Q9UL54 1235 aa22.43■■□□□ 1.18
CTSB-202ENST00000353047 SSFA2P28290 1259 aa22.43■■□□□ 1.18
CTSB-202ENST00000353047 ZMYM4Q5VZL5 1548 aa22.43■■□□□ 1.18
CTSB-202ENST00000353047 WDR63Q8IWG1 891 aa22.42■■□□□ 1.18
CTSB-202ENST00000353047 FAM13BQ9NYF5 915 aa22.42■■□□□ 1.18
CTSB-202ENST00000353047 ZNF521Q96K83 1311 aa22.42■■□□□ 1.18
CTSB-202ENST00000353047 CHD1LQ86WJ1 897 aa22.41■■□□□ 1.18
CTSB-202ENST00000353047 PRAM1Q96QH2 718 aa22.41■■□□□ 1.18
CTSB-202ENST00000353047 CABP1Q9NZU7 370 aa22.41■■□□□ 1.18
CTSB-202ENST00000353047 TRIM6-TRIM34B2RNG4 842 aa22.4■■□□□ 1.18
CTSB-202ENST00000353047 ESPNB1AK53 854 aa22.4■■□□□ 1.18
CTSB-202ENST00000353047 BCL11BQ9C0K0 894 aaPredicted RBP22.39■■□□□ 1.18
CTSB-202ENST00000353047 SMARCA5O60264 1052 aaPredicted RBP22.39■■□□□ 1.17
CTSB-202ENST00000353047 PLA2R1Q13018 1463 aa22.39■■□□□ 1.17
CTSB-202ENST00000353047 CASC1Q6TDU7 716 aa22.39■■□□□ 1.17
CTSB-202ENST00000353047 ARHGEF12Q9NZN5 1544 aa22.38■■□□□ 1.17
CTSB-202ENST00000353047 NASPP49321 788 aaPredicted RBP22.38■■□□□ 1.17
CTSB-202ENST00000353047 SCAF11Q99590 1463 aaKnown RBP22.38■■□□□ 1.17
CTSB-202ENST00000353047 RILPL2Q969X0 211 aa22.38■■□□□ 1.17
CTSB-202ENST00000353047 RAPGEF3O95398 923 aa22.37■■□□□ 1.17
CTSB-202ENST00000353047 TRAPPC8Q9Y2L5 1435 aa22.37■■□□□ 1.17
CTSB-202ENST00000353047 ESF1Q9H501 851 aaKnown RBP22.37■■□□□ 1.17
CTSB-202ENST00000353047 ADGRL2O95490 1459 aa22.37■■□□□ 1.17
CTSB-202ENST00000353047 PRPF40AO75400 957 aaKnown RBP22.36■■□□□ 1.17
CTSB-202ENST00000353047 RRS1Q15050 365 aaKnown RBP22.36■■□□□ 1.17
CTSB-202ENST00000353047 FAM83GA6ND36 823 aa22.36■■□□□ 1.17
CTSB-202ENST00000353047 MIS18AQ9NYP9 233 aa22.36■■□□□ 1.17
CTSB-202ENST00000353047 ASXL1Q8IXJ9 1541 aa22.36■■□□□ 1.17
CTSB-202ENST00000353047 CHAMP1Q96JM3 812 aa22.35■■□□□ 1.17
CTSB-202ENST00000353047 R3HCC1Q9Y3T6 440 aaKnown RBP22.35■■□□□ 1.17
CTSB-202ENST00000353047 DTNBO60941 627 aa22.34■■□□□ 1.17
CTSB-202ENST00000353047 TSHZ3Q63HK5 1081 aa22.34■■□□□ 1.17
CTSB-202ENST00000353047 C16orf71Q8IYS4 520 aaPredicted RBP22.34■■□□□ 1.17
CTSB-202ENST00000353047 VGFO15240 615 aaPredicted RBP22.33■■□□□ 1.17
CTSB-202ENST00000353047 NGEFQ8N5V2 710 aa22.33■■□□□ 1.17
CTSB-202ENST00000353047 ATAD2Q6PL18 1390 aa22.33■■□□□ 1.17
CTSB-202ENST00000353047 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.16
CTSB-202ENST00000353047 TSPYL6Q8N831 410 aa22.32■■□□□ 1.16
CTSB-202ENST00000353047 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
CTSB-202ENST00000353047 LTV1Q96GA3 475 aaPredicted RBP22.32■■□□□ 1.16
CTSB-202ENST00000353047 NOS1P29475 1434 aa22.32■■□□□ 1.16
CTSB-202ENST00000353047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.31■■□□□ 1.16
CTSB-202ENST00000353047 WAPLQ7Z5K2 1190 aa22.31■■□□□ 1.16
CTSB-202ENST00000353047 TRMT2AQ8IZ69 625 aaKnown RBP22.31■■□□□ 1.16
CTSB-202ENST00000353047 CHMP3Q9Y3E7 222 aa22.31■■□□□ 1.16
CTSB-202ENST00000353047 TWISTNBQ3B726 338 aaPredicted RBP22.3■■□□□ 1.16
CTSB-202ENST00000353047 EMILIN1Q9Y6C2 1016 aa22.3■■□□□ 1.16
CTSB-202ENST00000353047 KRT24Q2M2I5 525 aa22.3■■□□□ 1.16
CTSB-202ENST00000353047 TBC1D9Q6ZT07 1266 aa22.3■■□□□ 1.16
CTSB-202ENST00000353047 WDR7Q9Y4E6 1490 aa22.29■■□□□ 1.16
CTSB-202ENST00000353047 K7ELQ4 463 aaPredicted RBP22.29■■□□□ 1.16
CTSB-202ENST00000353047 RBM27Q9P2N5 1060 aaKnown RBP22.29■■□□□ 1.16
CTSB-202ENST00000353047 PBRM1Q86U86 1689 aa22.28■■□□□ 1.16
CTSB-202ENST00000353047 ITSN2Q9NZM3 1697 aa22.28■■□□□ 1.16
CTSB-202ENST00000353047 GAS2L2Q8NHY3 880 aa22.27■■□□□ 1.16
CTSB-202ENST00000353047 LARP6Q9BRS8 491 aaKnown RBP22.27■■□□□ 1.16
CTSB-202ENST00000353047 CD2BP2O95400 341 aaKnown RBP22.27■■□□□ 1.15
CTSB-202ENST00000353047 KIAA1211Q6ZU35 1233 aa22.27■■□□□ 1.15
CTSB-202ENST00000353047 ZRANB1Q9UGI0 708 aa22.27■■□□□ 1.15
CTSB-202ENST00000353047 ANTXR1Q9H6X2 564 aa22.26■■□□□ 1.15
CTSB-202ENST00000353047 ANO2Q9NQ90 1003 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms