RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
CLCN2-202ENST00000344937 KNSTRNQ9Y448 316 aa20.4■□□□□ 0.86
CLCN2-202ENST00000344937 CLTCQ00610 1675 aaKnown RBP20.4■□□□□ 0.86
CLCN2-202ENST00000344937 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
CLCN2-202ENST00000344937 KIAA1210Q9ULL0 1709 aa20.39■□□□□ 0.86
CLCN2-202ENST00000344937 RSPH6AQ9H0K4 717 aa20.39■□□□□ 0.85
CLCN2-202ENST00000344937 EIF3AQ14152 1382 aaKnown RBP20.39■□□□□ 0.85
CLCN2-202ENST00000344937 VGFO15240 615 aaPredicted RBP20.38■□□□□ 0.85
CLCN2-202ENST00000344937 AGLP35573 1532 aa20.38■□□□□ 0.85
CLCN2-202ENST00000344937 ARHGEF40Q8TER5 1519 aa20.37■□□□□ 0.85
CLCN2-202ENST00000344937 NFKBIBQ15653 356 aa20.37■□□□□ 0.85
CLCN2-202ENST00000344937 ESF1Q9H501 851 aaKnown RBP20.37■□□□□ 0.85
CLCN2-202ENST00000344937 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
CLCN2-202ENST00000344937 ERVK-7P63135 1459 aa20.36■□□□□ 0.85
CLCN2-202ENST00000344937 REREQ9P2R6 1566 aa20.36■□□□□ 0.85
CLCN2-202ENST00000344937 SAFB2Q14151 953 aaKnown RBP eCLIP20.35■□□□□ 0.85
CLCN2-202ENST00000344937 STK26Q9P289 416 aa20.35■□□□□ 0.85
CLCN2-202ENST00000344937 NEUROD2Q15784 382 aa20.34■□□□□ 0.85
CLCN2-202ENST00000344937 DDRGK1Q96HY6 314 aa20.34■□□□□ 0.85
CLCN2-202ENST00000344937 CENPJQ9HC77 1338 aaPredicted RBP20.33■□□□□ 0.85
CLCN2-202ENST00000344937 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
CLCN2-202ENST00000344937 FRAT1Q92837 279 aaPredicted RBP20.33■□□□□ 0.85
CLCN2-202ENST00000344937 BCAR3O75815 825 aa20.32■□□□□ 0.84
CLCN2-202ENST00000344937 ARXQ96QS3 562 aa20.32■□□□□ 0.84
CLCN2-202ENST00000344937 TMEM131LA2VDJ0 1609 aa20.32■□□□□ 0.84
CLCN2-202ENST00000344937 PLEKHH1Q9ULM0 1364 aa20.32■□□□□ 0.84
CLCN2-202ENST00000344937 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
CLCN2-202ENST00000344937 TNNT2P45379 298 aaPredicted RBP20.32■□□□□ 0.84
CLCN2-202ENST00000344937 CDCA8Q53HL2 280 aa20.32■□□□□ 0.84
CLCN2-202ENST00000344937 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
CLCN2-202ENST00000344937 ADGRB1O14514 1584 aa20.31■□□□□ 0.84
CLCN2-202ENST00000344937 APAF1O14727 1248 aa20.31■□□□□ 0.84
CLCN2-202ENST00000344937 GOLGA2Q08379 1002 aa20.31■□□□□ 0.84
CLCN2-202ENST00000344937 SPINK5Q9NQ38 1064 aaPredicted RBP20.3■□□□□ 0.84
CLCN2-202ENST00000344937 DUSP27Q5VZP5 1158 aa20.3■□□□□ 0.84
CLCN2-202ENST00000344937 ZMYM3Q14202 1370 aa20.3■□□□□ 0.84
CLCN2-202ENST00000344937 FRAT2O75474 233 aaPredicted RBP20.29■□□□□ 0.84
CLCN2-202ENST00000344937 CANXP27824 592 aaKnown RBP20.28■□□□□ 0.84
CLCN2-202ENST00000344937 SETBP1Q9Y6X0 1596 aa20.27■□□□□ 0.84
CLCN2-202ENST00000344937 CEBPAP49715 358 aaPredicted RBP20.26■□□□□ 0.83
CLCN2-202ENST00000344937 FAM161AQ3B820 660 aa20.26■□□□□ 0.83
CLCN2-202ENST00000344937 CENPQQ7L2Z9 268 aaPredicted RBP20.26■□□□□ 0.83
CLCN2-202ENST00000344937 FAM43AQ8N2R8 423 aa20.26■□□□□ 0.83
CLCN2-202ENST00000344937 C8orf34Q49A92 452 aa20.24■□□□□ 0.83
CLCN2-202ENST00000344937 AMER1Q5JTC6 1135 aaPredicted RBP20.24■□□□□ 0.83
CLCN2-202ENST00000344937 ZMYND15Q9H091 742 aa20.24■□□□□ 0.83
CLCN2-202ENST00000344937 DMRT2Q9Y5R5 561 aa20.24■□□□□ 0.83
CLCN2-202ENST00000344937 KDM5AP29375 1690 aaKnown RBP20.23■□□□□ 0.83
CLCN2-202ENST00000344937 MYOM1P52179 1685 aa20.23■□□□□ 0.83
CLCN2-202ENST00000344937 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.23■□□□□ 0.83
CLCN2-202ENST00000344937 RRP7AQ9Y3A4 280 aaKnown RBP20.23■□□□□ 0.83
CLCN2-202ENST00000344937 SLKQ9H2G2 1235 aaPredicted RBP20.23■□□□□ 0.83
CLCN2-202ENST00000344937 SLC12A5Q9H2X9 1139 aa20.23■□□□□ 0.83
CLCN2-202ENST00000344937 CARD14Q9BXL6 1004 aa20.22■□□□□ 0.83
CLCN2-202ENST00000344937 KDM2BQ8NHM5 1336 aa20.22■□□□□ 0.83
CLCN2-202ENST00000344937 SPATA31D1Q6ZQQ2 1576 aa20.22■□□□□ 0.83
CLCN2-202ENST00000344937 A2ML1A8K2U0 1454 aa20.22■□□□□ 0.83
CLCN2-202ENST00000344937 QRICH2Q9H0J4 1663 aa20.21■□□□□ 0.83
CLCN2-202ENST00000344937 ZFYVE9O95405 1425 aa20.21■□□□□ 0.83
CLCN2-202ENST00000344937 PANK1Q8TE04 598 aa20.21■□□□□ 0.83
CLCN2-202ENST00000344937 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
CLCN2-202ENST00000344937 COG6Q9Y2V7 657 aa20.21■□□□□ 0.83
CLCN2-202ENST00000344937 VSIG10Q8N0Z9 540 aa20.2■□□□□ 0.82
CLCN2-202ENST00000344937 ASXL1Q8IXJ9 1541 aa20.2■□□□□ 0.82
CLCN2-202ENST00000344937 GLIPR1L2Q4G1C9 344 aa20.2■□□□□ 0.82
CLCN2-202ENST00000344937 SPRYD3Q8NCJ5 442 aa20.2■□□□□ 0.82
CLCN2-202ENST00000344937 MYO3AQ8NEV4 1616 aa20.19■□□□□ 0.82
CLCN2-202ENST00000344937 IGHDP01880 384 aa20.19■□□□□ 0.82
CLCN2-202ENST00000344937 CABP2Q9NPB3 220 aa20.19■□□□□ 0.82
CLCN2-202ENST00000344937 SBNO2Q9Y2G9 1366 aa20.19■□□□□ 0.82
CLCN2-202ENST00000344937 BLMP54132 1417 aaPredicted RBP20.18■□□□□ 0.82
CLCN2-202ENST00000344937 PRAM1Q96QH2 718 aa20.18■□□□□ 0.82
CLCN2-202ENST00000344937 MINK1Q8N4C8 1332 aaPredicted RBP20.18■□□□□ 0.82
CLCN2-202ENST00000344937 RIMS2Q9UQ26 1411 aa20.18■□□□□ 0.82
CLCN2-202ENST00000344937 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
CLCN2-202ENST00000344937 SLFN5Q08AF3 891 aa20.17■□□□□ 0.82
CLCN2-202ENST00000344937 SEC24BO95487 1268 aa20.16■□□□□ 0.82
CLCN2-202ENST00000344937 ARHGEF28Q8N1W1 1705 aaKnown RBP20.16■□□□□ 0.82
CLCN2-202ENST00000344937 CLUAP1Q96AJ1 413 aa20.16■□□□□ 0.82
CLCN2-202ENST00000344937 POGKQ9P215 609 aa20.16■□□□□ 0.82
CLCN2-202ENST00000344937 TNRQ92752 1358 aa20.15■□□□□ 0.82
CLCN2-202ENST00000344937 ALKQ9UM73 1620 aa20.14■□□□□ 0.82
CLCN2-202ENST00000344937 YTHDC2Q9H6S0 1430 aaKnown RBP20.14■□□□□ 0.81
CLCN2-202ENST00000344937 WAPLQ7Z5K2 1190 aa20.13■□□□□ 0.81
CLCN2-202ENST00000344937 EVC2Q86UK5 1308 aa20.13■□□□□ 0.81
CLCN2-202ENST00000344937 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
CLCN2-202ENST00000344937 TNNQ9UQP3 1299 aa20.11■□□□□ 0.81
CLCN2-202ENST00000344937 TULP4Q9NRJ4 1543 aa20.11■□□□□ 0.81
CLCN2-202ENST00000344937 PTPRMP28827 1452 aa20.1■□□□□ 0.81
CLCN2-202ENST00000344937 NSD3Q9BZ95 1437 aa20.09■□□□□ 0.81
CLCN2-202ENST00000344937 PLEKHG5O94827 1062 aa20.08■□□□□ 0.8
CLCN2-202ENST00000344937 RRAGDQ9NQL2 400 aaPredicted RBP20.07■□□□□ 0.8
CLCN2-202ENST00000344937 METP08581 1390 aa20.06■□□□□ 0.8
CLCN2-202ENST00000344937 ZNF521Q96K83 1311 aa20.06■□□□□ 0.8
CLCN2-202ENST00000344937 TXNDC2Q86VQ3 553 aa20.05■□□□□ 0.8
CLCN2-202ENST00000344937 LTKP29376 864 aa20.05■□□□□ 0.8
CLCN2-202ENST00000344937 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLCN2-202ENST00000344937 PODXL2Q9NZ53 605 aa20.03■□□□□ 0.8
CLCN2-202ENST00000344937 E9PSI1 815 aa20.03■□□□□ 0.8
CLCN2-202ENST00000344937 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms