RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 PLEKHH1Q9ULM0 1364 aa29.69■■■□□ 2.34
SMARCB1-202ENST00000344921 CADPS2Q86UW7 1296 aa29.68■■■□□ 2.34
SMARCB1-202ENST00000344921 NALCNQ8IZF0 1738 aa29.68■■■□□ 2.34
SMARCB1-202ENST00000344921 DLC1Q96QB1 1528 aa29.67■■■□□ 2.34
SMARCB1-202ENST00000344921 ILDR1Q86SU0 546 aaPredicted RBP29.65■■■□□ 2.34
SMARCB1-202ENST00000344921 SLAIN2Q9P270 581 aa29.63■■■□□ 2.33
SMARCB1-202ENST00000344921 DCCP43146 1447 aa29.63■■■□□ 2.33
SMARCB1-202ENST00000344921 ARHGEF28Q8N1W1 1705 aaKnown RBP29.6■■■□□ 2.33
SMARCB1-202ENST00000344921 CARD11Q9BXL7 1154 aa29.6■■■□□ 2.33
SMARCB1-202ENST00000344921 RALGAPBQ86X10 1494 aa29.59■■■□□ 2.33
SMARCB1-202ENST00000344921 MINK1Q8N4C8 1332 aaPredicted RBP29.56■■■□□ 2.32
SMARCB1-202ENST00000344921 HIRIP3Q9BW71 556 aaPredicted RBP29.56■■■□□ 2.32
SMARCB1-202ENST00000344921 GPRASP1Q5JY77 1395 aa29.55■■■□□ 2.32
SMARCB1-202ENST00000344921 CDC42BPGQ6DT37 1551 aa29.52■■■□□ 2.32
SMARCB1-202ENST00000344921 MST1RQ04912 1400 aa29.52■■■□□ 2.32
SMARCB1-202ENST00000344921 NUTM2FA1L443 756 aa29.52■■■□□ 2.32
SMARCB1-202ENST00000344921 CENPJQ9HC77 1338 aaPredicted RBP29.52■■■□□ 2.32
SMARCB1-202ENST00000344921 EIF3AQ14152 1382 aaKnown RBP29.51■■■□□ 2.31
SMARCB1-202ENST00000344921 ROBO1Q9Y6N7 1651 aa29.5■■■□□ 2.31
SMARCB1-202ENST00000344921 C1orf167Q5SNV9 1468 aa29.46■■■□□ 2.31
SMARCB1-202ENST00000344921 ADGRB2O60241 1585 aa29.44■■■□□ 2.3
SMARCB1-202ENST00000344921 BRINP3Q76B58 766 aa29.44■■■□□ 2.3
SMARCB1-202ENST00000344921 QRICH2Q9H0J4 1663 aa29.44■■■□□ 2.3
SMARCB1-202ENST00000344921 FMN2Q9NZ56 1722 aa29.44■■■□□ 2.3
SMARCB1-202ENST00000344921 WASLO00401 505 aaPredicted RBP29.43■■■□□ 2.3
SMARCB1-202ENST00000344921 HSPA1LP34931 641 aa29.43■■■□□ 2.3
SMARCB1-202ENST00000344921 ESCO1Q5FWF5 840 aa29.43■■■□□ 2.3
SMARCB1-202ENST00000344921 ORAI2Q96SN7 254 aa29.42■■■□□ 2.3
SMARCB1-202ENST00000344921 CDK19Q9BWU1 502 aa29.39■■■□□ 2.3
SMARCB1-202ENST00000344921 SRPK2P78362 688 aaKnown RBP29.35■■■□□ 2.29
SMARCB1-202ENST00000344921 RGPD8O14715 1765 aaPredicted RBP29.35■■■□□ 2.29
SMARCB1-202ENST00000344921 USP47Q96K76 1375 aa29.34■■■□□ 2.29
SMARCB1-202ENST00000344921 ST20-MTHFSA0A0A6YYL1 179 aa29.33■■■□□ 2.29
SMARCB1-202ENST00000344921 TULP4Q9NRJ4 1543 aa29.33■■■□□ 2.29
SMARCB1-202ENST00000344921 PHLPP1O60346 1717 aa29.33■■■□□ 2.29
SMARCB1-202ENST00000344921 EVC2Q86UK5 1308 aa29.32■■■□□ 2.28
SMARCB1-202ENST00000344921 ANKARQ7Z5J8 1434 aa29.32■■■□□ 2.28
SMARCB1-202ENST00000344921 DDX17Q92841 729 aaKnown RBP29.32■■■□□ 2.28
SMARCB1-202ENST00000344921 NUDT16Q96DE0 195 aaKnown RBP29.31■■■□□ 2.28
SMARCB1-202ENST00000344921 CABP2Q9NPB3 220 aa29.3■■■□□ 2.28
SMARCB1-202ENST00000344921 PHF8Q9UPP1 1060 aa29.3■■■□□ 2.28
SMARCB1-202ENST00000344921 USP32Q8NFA0 1604 aa29.3■■■□□ 2.28
SMARCB1-202ENST00000344921 PRR36Q9H6K5 1346 aa29.3■■■□□ 2.28
SMARCB1-202ENST00000344921 FOXO3O43524 673 aa29.28■■■□□ 2.28
SMARCB1-202ENST00000344921 AHDC1Q5TGY3 1603 aaPredicted RBP29.28■■■□□ 2.28
SMARCB1-202ENST00000344921 PMFBP1Q8TBY8 1022 aa29.28■■■□□ 2.28
SMARCB1-202ENST00000344921 SBNO2Q9Y2G9 1366 aa29.27■■■□□ 2.28
SMARCB1-202ENST00000344921 NHSL1Q5SYE7 1610 aa29.26■■■□□ 2.28
SMARCB1-202ENST00000344921 NPHP3Q7Z494 1330 aa29.26■■■□□ 2.27
SMARCB1-202ENST00000344921 ATP7BP35670 1465 aa29.25■■■□□ 2.27
SMARCB1-202ENST00000344921 KIF1AQ12756 1690 aa29.25■■■□□ 2.27
SMARCB1-202ENST00000344921 CCDC61Q9Y6R9 512 aa29.24■■■□□ 2.27
SMARCB1-202ENST00000344921 XPCQ01831 940 aaPredicted RBP29.23■■■□□ 2.27
SMARCB1-202ENST00000344921 ITSN1Q15811 1721 aa29.22■■■□□ 2.27
SMARCB1-202ENST00000344921 SLC24A1O60721 1099 aa29.22■■■□□ 2.27
SMARCB1-202ENST00000344921 EIF4G2P78344 907 aaKnown RBP eCLIP29.22■■■□□ 2.27
SMARCB1-202ENST00000344921 TESK2Q96S53 571 aa29.22■■■□□ 2.27
SMARCB1-202ENST00000344921 COL16A1Q07092 1604 aaPredicted RBP29.22■■■□□ 2.27
SMARCB1-202ENST00000344921 NGDNQ8NEJ9 315 aaKnown RBP29.21■■■□□ 2.27
SMARCB1-202ENST00000344921 PSME1Q06323 249 aa29.2■■■□□ 2.26
SMARCB1-202ENST00000344921 LRRC59Q96AG4 307 aaKnown RBP29.2■■■□□ 2.26
SMARCB1-202ENST00000344921 SOS2Q07890 1332 aaPredicted RBP29.18■■■□□ 2.26
SMARCB1-202ENST00000344921 KRT28Q7Z3Y7 464 aa29.17■■■□□ 2.26
SMARCB1-202ENST00000344921 PPIP5K1Q6PFW1 1433 aa29.16■■■□□ 2.26
SMARCB1-202ENST00000344921 TMF1P82094 1093 aa29.16■■■□□ 2.26
SMARCB1-202ENST00000344921 HSPA5P11021 654 aaKnown RBP29.15■■■□□ 2.26
SMARCB1-202ENST00000344921 CABP1Q9NZU7 370 aa29.14■■■□□ 2.26
SMARCB1-202ENST00000344921 TOPAZ1Q8N9V7 1692 aa29.14■■■□□ 2.26
SMARCB1-202ENST00000344921 ATAD2Q6PL18 1390 aa29.14■■■□□ 2.26
SMARCB1-202ENST00000344921 JCADQ9P266 1359 aa29.14■■■□□ 2.26
SMARCB1-202ENST00000344921 PXDNQ92626 1479 aa29.13■■■□□ 2.25
SMARCB1-202ENST00000344921 PLEKHG3A1L390 1219 aa29.12■■■□□ 2.25
SMARCB1-202ENST00000344921 ACEP12821 1306 aa29.12■■■□□ 2.25
SMARCB1-202ENST00000344921 TMC1Q8TDI8 760 aa29.09■■■□□ 2.25
SMARCB1-202ENST00000344921 DISP3Q9P2K9 1392 aa29.09■■■□□ 2.25
SMARCB1-202ENST00000344921 LMOD2Q6P5Q4 547 aa29.08■■■□□ 2.25
SMARCB1-202ENST00000344921 PAK3O75914 559 aaPredicted RBP29.07■■■□□ 2.24
SMARCB1-202ENST00000344921 CDCA8Q53HL2 280 aa29.07■■■□□ 2.24
SMARCB1-202ENST00000344921 PUS7Q96PZ0 661 aaKnown RBP29.07■■■□□ 2.24
SMARCB1-202ENST00000344921 POLR3AO14802 1390 aaPredicted RBP29.07■■■□□ 2.24
SMARCB1-202ENST00000344921 SHPRHQ149N8 1683 aa29.05■■■□□ 2.24
SMARCB1-202ENST00000344921 SPATA31A3Q5VYP0 1347 aa29.04■■■□□ 2.24
SMARCB1-202ENST00000344921 PNPLA6Q8IY17 1366 aa29.03■■■□□ 2.24
SMARCB1-202ENST00000344921 SBNO1A3KN83 1393 aa29.03■■■□□ 2.24
SMARCB1-202ENST00000344921 SPATA31A6Q5VVP1 1343 aa29.02■■■□□ 2.24
SMARCB1-202ENST00000344921 NUTM2BA6NNL0 878 aaPredicted RBP29.02■■■□□ 2.24
SMARCB1-202ENST00000344921 NUTM2EB1AL46 878 aaPredicted RBP29.02■■■□□ 2.24
SMARCB1-202ENST00000344921 NUTM2AQ8IVF1 878 aaPredicted RBP29.02■■■□□ 2.24
SMARCB1-202ENST00000344921 TNS3Q68CZ2 1445 aa29.01■■■□□ 2.23
SMARCB1-202ENST00000344921 POLR3GLQ9BT43 218 aa29.01■■■□□ 2.23
SMARCB1-202ENST00000344921 SLC12A5Q9H2X9 1139 aa29.01■■■□□ 2.23
SMARCB1-202ENST00000344921 ZEB1P37275 1124 aaPredicted RBP29■■■□□ 2.23
SMARCB1-202ENST00000344921 PLEKHG5O94827 1062 aa28.99■■■□□ 2.23
SMARCB1-202ENST00000344921 ZNF692Q9BU19 519 aaPredicted RBP28.99■■■□□ 2.23
SMARCB1-202ENST00000344921 TRPM3Q9HCF6 1732 aaPredicted RBP28.98■■■□□ 2.23
SMARCB1-202ENST00000344921 HDGFL2Q7Z4V5 671 aaPredicted RBP28.97■■■□□ 2.23
SMARCB1-202ENST00000344921 ARHGEF10O15013 1369 aa28.96■■■□□ 2.23
SMARCB1-202ENST00000344921 TERF2IPQ9NYB0 399 aa28.96■■■□□ 2.23
SMARCB1-202ENST00000344921 USP6P35125 1406 aa28.95■■■□□ 2.22
SMARCB1-202ENST00000344921 KTN1Q86UP2 1357 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms