RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PLEKHH1Q9ULM0 1364 aa23.35■■□□□ 1.33
ATG4B-201ENST00000344376 NHSL1Q5SYE7 1610 aa23.34■■□□□ 1.33
ATG4B-201ENST00000344376 SPATA31A6Q5VVP1 1343 aa23.32■■□□□ 1.32
ATG4B-201ENST00000344376 ADGRB1O14514 1584 aa23.3■■□□□ 1.32
ATG4B-201ENST00000344376 DLC1Q96QB1 1528 aa23.3■■□□□ 1.32
ATG4B-201ENST00000344376 LRRC59Q96AG4 307 aaKnown RBP23.3■■□□□ 1.32
ATG4B-201ENST00000344376 ORAI2Q96SN7 254 aa23.3■■□□□ 1.32
ATG4B-201ENST00000344376 POGKQ9P215 609 aa23.3■■□□□ 1.32
ATG4B-201ENST00000344376 SHPRHQ149N8 1683 aa23.29■■□□□ 1.32
ATG4B-201ENST00000344376 PRAM1Q96QH2 718 aa23.29■■□□□ 1.32
ATG4B-201ENST00000344376 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
ATG4B-201ENST00000344376 ESCO1Q5FWF5 840 aa23.27■■□□□ 1.32
ATG4B-201ENST00000344376 DDX17Q92841 729 aaKnown RBP23.27■■□□□ 1.32
ATG4B-201ENST00000344376 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
ATG4B-201ENST00000344376 TRAK1Q9UPV9 953 aa23.26■■□□□ 1.31
ATG4B-201ENST00000344376 MEX3CQ5U5Q3 659 aaKnown RBP23.25■■□□□ 1.31
ATG4B-201ENST00000344376 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
ATG4B-201ENST00000344376 SOCS7O14512 581 aa23.24■■□□□ 1.31
ATG4B-201ENST00000344376 NPHP3Q7Z494 1330 aa23.24■■□□□ 1.31
ATG4B-201ENST00000344376 FMN2Q9NZ56 1722 aa23.22■■□□□ 1.31
ATG4B-201ENST00000344376 SOS2Q07890 1332 aaPredicted RBP23.22■■□□□ 1.31
ATG4B-201ENST00000344376 LRP6O75581 1613 aa23.22■■□□□ 1.31
ATG4B-201ENST00000344376 RGS17Q9UGC6 210 aaPredicted RBP23.21■■□□□ 1.31
ATG4B-201ENST00000344376 PNPLA6Q8IY17 1366 aa23.2■■□□□ 1.3
ATG4B-201ENST00000344376 NUTM2BA6NNL0 878 aaPredicted RBP23.2■■□□□ 1.3
ATG4B-201ENST00000344376 NUTM2EB1AL46 878 aaPredicted RBP23.2■■□□□ 1.3
ATG4B-201ENST00000344376 NUTM2AQ8IVF1 878 aaPredicted RBP23.2■■□□□ 1.3
ATG4B-201ENST00000344376 KIAA1210Q9ULL0 1709 aa23.18■■□□□ 1.3
ATG4B-201ENST00000344376 SIN3AQ96ST3 1273 aa23.18■■□□□ 1.3
ATG4B-201ENST00000344376 ADGRB2O60241 1585 aa23.17■■□□□ 1.3
ATG4B-201ENST00000344376 FOXO3O43524 673 aa23.17■■□□□ 1.3
ATG4B-201ENST00000344376 NEUROD1Q13562 356 aa23.17■■□□□ 1.3
ATG4B-201ENST00000344376 EIF3AQ14152 1382 aaKnown RBP23.17■■□□□ 1.3
ATG4B-201ENST00000344376 KIF1AQ12756 1690 aa23.16■■□□□ 1.3
ATG4B-201ENST00000344376 L3MBTL2Q969R5 705 aa23.16■■□□□ 1.3
ATG4B-201ENST00000344376 MINK1Q8N4C8 1332 aaPredicted RBP23.15■■□□□ 1.3
ATG4B-201ENST00000344376 HIRIP3Q9BW71 556 aaPredicted RBP23.14■■□□□ 1.3
ATG4B-201ENST00000344376 ANKARQ7Z5J8 1434 aa23.14■■□□□ 1.3
ATG4B-201ENST00000344376 PXDNQ92626 1479 aa23.13■■□□□ 1.29
ATG4B-201ENST00000344376 PHF8Q9UPP1 1060 aa23.13■■□□□ 1.29
ATG4B-201ENST00000344376 XPCQ01831 940 aaPredicted RBP23.12■■□□□ 1.29
ATG4B-201ENST00000344376 ZNF772Q68DY9 489 aaPredicted RBP23.12■■□□□ 1.29
ATG4B-201ENST00000344376 ARHGEF28Q8N1W1 1705 aaKnown RBP23.12■■□□□ 1.29
ATG4B-201ENST00000344376 POTEAQ6S8J7 498 aa23.11■■□□□ 1.29
ATG4B-201ENST00000344376 WASLO00401 505 aaPredicted RBP23.1■■□□□ 1.29
ATG4B-201ENST00000344376 NBPF1Q3BBV0 1214 aa23.1■■□□□ 1.29
ATG4B-201ENST00000344376 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.29
ATG4B-201ENST00000344376 PSME1Q06323 249 aa23.07■■□□□ 1.28
ATG4B-201ENST00000344376 KRT28Q7Z3Y7 464 aa23.07■■□□□ 1.28
ATG4B-201ENST00000344376 C8orf37Q96NL8 207 aa23.07■■□□□ 1.28
ATG4B-201ENST00000344376 COL22A1Q8NFW1 1626 aaPredicted RBP23.06■■□□□ 1.28
ATG4B-201ENST00000344376 ADAMTS2O95450 1211 aa23.06■■□□□ 1.28
ATG4B-201ENST00000344376 USP32Q8NFA0 1604 aa23.05■■□□□ 1.28
ATG4B-201ENST00000344376 RGPD8O14715 1765 aaPredicted RBP23.04■■□□□ 1.28
ATG4B-201ENST00000344376 AFF2P51816 1311 aa23.04■■□□□ 1.28
ATG4B-201ENST00000344376 SPATA31A3Q5VYP0 1347 aa23.03■■□□□ 1.28
ATG4B-201ENST00000344376 PMFBP1Q8TBY8 1022 aa23.03■■□□□ 1.28
ATG4B-201ENST00000344376 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
ATG4B-201ENST00000344376 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
ATG4B-201ENST00000344376 TNS3Q68CZ2 1445 aa23.02■■□□□ 1.28
ATG4B-201ENST00000344376 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
ATG4B-201ENST00000344376 NGLY1Q96IV0 654 aa23.01■■□□□ 1.27
ATG4B-201ENST00000344376 SBNO1A3KN83 1393 aa23.01■■□□□ 1.27
ATG4B-201ENST00000344376 ROCK2O75116 1388 aaKnown RBP23.01■■□□□ 1.27
ATG4B-201ENST00000344376 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
ATG4B-201ENST00000344376 TRPM1Q7Z4N2 1603 aa23■■□□□ 1.27
ATG4B-201ENST00000344376 CDK19Q9BWU1 502 aa22.99■■□□□ 1.27
ATG4B-201ENST00000344376 NGDNQ8NEJ9 315 aaKnown RBP22.98■■□□□ 1.27
ATG4B-201ENST00000344376 NUDT16Q96DE0 195 aaKnown RBP22.98■■□□□ 1.27
ATG4B-201ENST00000344376 ATP7BP35670 1465 aa22.98■■□□□ 1.27
ATG4B-201ENST00000344376 ARHGEF10O15013 1369 aa22.98■■□□□ 1.27
ATG4B-201ENST00000344376 LMOD2Q6P5Q4 547 aa22.97■■□□□ 1.27
ATG4B-201ENST00000344376 ITSN1Q15811 1721 aa22.96■■□□□ 1.27
ATG4B-201ENST00000344376 RXRBP28702 533 aa22.96■■□□□ 1.27
ATG4B-201ENST00000344376 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
ATG4B-201ENST00000344376 SRPK2P78362 688 aaKnown RBP22.93■■□□□ 1.26
ATG4B-201ENST00000344376 QTRT2Q9H974 415 aaKnown RBP22.93■■□□□ 1.26
ATG4B-201ENST00000344376 USP21Q9UK80 565 aa22.93■■□□□ 1.26
ATG4B-201ENST00000344376 CCDC61Q9Y6R9 512 aa22.93■■□□□ 1.26
ATG4B-201ENST00000344376 QRICH2Q9H0J4 1663 aa22.92■■□□□ 1.26
ATG4B-201ENST00000344376 NBPF8Q3BBV2 869 aa22.92■■□□□ 1.26
ATG4B-201ENST00000344376 FNBP4Q8N3X1 1017 aaPredicted RBP22.92■■□□□ 1.26
ATG4B-201ENST00000344376 RBM6P78332 1123 aaKnown RBP22.89■■□□□ 1.26
ATG4B-201ENST00000344376 CDK12Q9NYV4 1490 aaPredicted RBP22.89■■□□□ 1.25
ATG4B-201ENST00000344376 TRPM3Q9HCF6 1732 aaPredicted RBP22.89■■□□□ 1.25
ATG4B-201ENST00000344376 PAK3O75914 559 aaPredicted RBP22.89■■□□□ 1.25
ATG4B-201ENST00000344376 PLEKHG5O94827 1062 aa22.89■■□□□ 1.25
ATG4B-201ENST00000344376 TRPC5Q9UL62 973 aaPredicted RBP22.89■■□□□ 1.25
ATG4B-201ENST00000344376 MARF1Q9Y4F3 1742 aaKnown RBP22.88■■□□□ 1.25
ATG4B-201ENST00000344376 TOPAZ1Q8N9V7 1692 aa22.88■■□□□ 1.25
ATG4B-201ENST00000344376 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
ATG4B-201ENST00000344376 CABLES1Q8TDN4 633 aa22.87■■□□□ 1.25
ATG4B-201ENST00000344376 CARD11Q9BXL7 1154 aa22.87■■□□□ 1.25
ATG4B-201ENST00000344376 RALGAPBQ86X10 1494 aa22.87■■□□□ 1.25
ATG4B-201ENST00000344376 POLR3AO14802 1390 aaPredicted RBP22.86■■□□□ 1.25
ATG4B-201ENST00000344376 PLEKHG3A1L390 1219 aa22.86■■□□□ 1.25
ATG4B-201ENST00000344376 CABP2Q9NPB3 220 aa22.86■■□□□ 1.25
ATG4B-201ENST00000344376 ACEP12821 1306 aa22.86■■□□□ 1.25
ATG4B-201ENST00000344376 PPIP5K1Q6PFW1 1433 aa22.85■■□□□ 1.25
ATG4B-201ENST00000344376 PCGF6Q9BYE7 350 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms