RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 SPATA31E1Q6ZUB1 1445 aa20.39■□□□□ 0.86
RDX-201ENST00000343115 KIF16BQ96L93 1317 aa20.39■□□□□ 0.85
RDX-201ENST00000343115 IGHDP01880 384 aa20.38■□□□□ 0.85
RDX-201ENST00000343115 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
RDX-201ENST00000343115 FOXD4L6Q3SYB3 417 aaPredicted RBP20.38■□□□□ 0.85
RDX-201ENST00000343115 FOXD4L3Q6VB84 417 aaPredicted RBP20.38■□□□□ 0.85
RDX-201ENST00000343115 DNMT1P26358 1616 aaKnown RBP20.38■□□□□ 0.85
RDX-201ENST00000343115 SYCP2Q9BX26 1530 aa20.38■□□□□ 0.85
RDX-201ENST00000343115 DNTTIP2Q5QJE6 756 aaKnown RBP20.37■□□□□ 0.85
RDX-201ENST00000343115 CDK19Q9BWU1 502 aa20.37■□□□□ 0.85
RDX-201ENST00000343115 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
RDX-201ENST00000343115 WDR63Q8IWG1 891 aa20.37■□□□□ 0.85
RDX-201ENST00000343115 SPINK5Q9NQ38 1064 aaPredicted RBP20.36■□□□□ 0.85
RDX-201ENST00000343115 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
RDX-201ENST00000343115 PLEKHH1Q9ULM0 1364 aa20.36■□□□□ 0.85
RDX-201ENST00000343115 HMMRO75330 724 aa20.35■□□□□ 0.85
RDX-201ENST00000343115 FBLN1P23142 703 aa20.35■□□□□ 0.85
RDX-201ENST00000343115 MVPQ14764 893 aaKnown RBP20.35■□□□□ 0.85
RDX-201ENST00000343115 MCCP23508 829 aa20.35■□□□□ 0.85
RDX-201ENST00000343115 ADGRL1O94910 1474 aa20.35■□□□□ 0.85
RDX-201ENST00000343115 ATF7IPQ6VMQ6 1270 aa20.34■□□□□ 0.85
RDX-201ENST00000343115 CHMP5Q9NZZ3 219 aa20.34■□□□□ 0.85
RDX-201ENST00000343115 GNAI1P63096 354 aa20.34■□□□□ 0.85
RDX-201ENST00000343115 TMPOP42166 694 aaKnown RBP20.34■□□□□ 0.85
RDX-201ENST00000343115 RILPL2Q969X0 211 aa20.34■□□□□ 0.85
RDX-201ENST00000343115 GLIPR1L2Q4G1C9 344 aa20.33■□□□□ 0.85
RDX-201ENST00000343115 NUTM2GQ5VZR2 741 aa20.33■□□□□ 0.84
RDX-201ENST00000343115 TNNQ9UQP3 1299 aa20.33■□□□□ 0.84
RDX-201ENST00000343115 SCAF11Q99590 1463 aaKnown RBP20.33■□□□□ 0.84
RDX-201ENST00000343115 SSH1Q8WYL5 1049 aa20.32■□□□□ 0.84
RDX-201ENST00000343115 FANCAO15360 1455 aa20.32■□□□□ 0.84
RDX-201ENST00000343115 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
RDX-201ENST00000343115 ASXL2Q76L83 1435 aa20.32■□□□□ 0.84
RDX-201ENST00000343115 WAPLQ7Z5K2 1190 aa20.31■□□□□ 0.84
RDX-201ENST00000343115 CARD14Q9BXL6 1004 aa20.31■□□□□ 0.84
RDX-201ENST00000343115 API5Q9BZZ5 524 aaKnown RBP20.31■□□□□ 0.84
RDX-201ENST00000343115 DDX49Q9Y6V7 483 aaKnown RBP20.31■□□□□ 0.84
RDX-201ENST00000343115 IDI1Q13907 227 aa20.31■□□□□ 0.84
RDX-201ENST00000343115 NKTRP30414 1462 aaKnown RBP20.31■□□□□ 0.84
RDX-201ENST00000343115 EID1Q9Y6B2 187 aa20.31■□□□□ 0.84
RDX-201ENST00000343115 LRPPRCP42704 1394 aaKnown RBP20.3■□□□□ 0.84
RDX-201ENST00000343115 TMEM57Q8N5G2 664 aa20.3■□□□□ 0.84
RDX-201ENST00000343115 ITSN2Q9NZM3 1697 aa20.3■□□□□ 0.84
RDX-201ENST00000343115 RRS1Q15050 365 aaKnown RBP20.3■□□□□ 0.84
RDX-201ENST00000343115 NOS1P29475 1434 aa20.3■□□□□ 0.84
RDX-201ENST00000343115 FGD1P98174 961 aa20.29■□□□□ 0.84
RDX-201ENST00000343115 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
RDX-201ENST00000343115 TWISTNBQ3B726 338 aaPredicted RBP20.28■□□□□ 0.84
RDX-201ENST00000343115 KIAA1211Q6ZU35 1233 aa20.28■□□□□ 0.84
RDX-201ENST00000343115 FBXO31Q5XUX0 539 aaPredicted RBP20.28■□□□□ 0.84
RDX-201ENST00000343115 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
RDX-201ENST00000343115 MSNP26038 577 aaKnown RBP20.27■□□□□ 0.84
RDX-201ENST00000343115 AAMPQ13685 434 aa20.27■□□□□ 0.84
RDX-201ENST00000343115 CFAP44Q96MT7 982 aa20.27■□□□□ 0.84
RDX-201ENST00000343115 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.84
RDX-201ENST00000343115 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.83
RDX-201ENST00000343115 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
RDX-201ENST00000343115 ST18O60284 1047 aa20.26■□□□□ 0.83
RDX-201ENST00000343115 FKBP5Q13451 457 aaPredicted RBP20.25■□□□□ 0.83
RDX-201ENST00000343115 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
RDX-201ENST00000343115 DCTN1Q14203 1278 aa20.25■□□□□ 0.83
RDX-201ENST00000343115 SULT6B1Q6IMI4 303 aa20.25■□□□□ 0.83
RDX-201ENST00000343115 PLCH2O75038 1416 aa20.25■□□□□ 0.83
RDX-201ENST00000343115 UHRF1BP1Q6BDS2 1440 aa20.25■□□□□ 0.83
RDX-201ENST00000343115 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
RDX-201ENST00000343115 A2MP01023 1474 aa20.25■□□□□ 0.83
RDX-201ENST00000343115 TSPYL4Q9UJ04 414 aa20.24■□□□□ 0.83
RDX-201ENST00000343115 GCC2Q8IWJ2 1684 aa20.23■□□□□ 0.83
RDX-201ENST00000343115 C14orf93Q9H972 538 aaKnown RBP20.22■□□□□ 0.83
RDX-201ENST00000343115 ADGRL2O95490 1459 aa20.21■□□□□ 0.83
RDX-201ENST00000343115 TRIM27P14373 513 aa20.21■□□□□ 0.83
RDX-201ENST00000343115 TRAK2O60296 914 aa20.21■□□□□ 0.83
RDX-201ENST00000343115 RLBP1P12271 317 aa20.21■□□□□ 0.83
RDX-201ENST00000343115 ARID3AQ99856 593 aa20.21■□□□□ 0.83
RDX-201ENST00000343115 ARHGEF12Q9NZN5 1544 aa20.21■□□□□ 0.83
RDX-201ENST00000343115 RPGRIP1LQ68CZ1 1315 aa20.21■□□□□ 0.83
RDX-201ENST00000343115 EMILIN1Q9Y6C2 1016 aa20.2■□□□□ 0.82
RDX-201ENST00000343115 DENND4BO75064 1496 aaPredicted RBP20.2■□□□□ 0.82
RDX-201ENST00000343115 GPRASP1Q5JY77 1395 aa20.2■□□□□ 0.82
RDX-201ENST00000343115 C8orf34Q49A92 452 aa20.19■□□□□ 0.82
RDX-201ENST00000343115 GOLGA6L4A6NEF3 574 aa20.19■□□□□ 0.82
RDX-201ENST00000343115 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.19■□□□□ 0.82
RDX-201ENST00000343115 ANO2Q9NQ90 1003 aa20.19■□□□□ 0.82
RDX-201ENST00000343115 ANO8Q9HCE9 1232 aaPredicted RBP20.19■□□□□ 0.82
RDX-201ENST00000343115 CHD1LQ86WJ1 897 aa20.18■□□□□ 0.82
RDX-201ENST00000343115 SLC26A8Q96RN1 970 aa20.18■□□□□ 0.82
RDX-201ENST00000343115 ZNF330Q9Y3S2 320 aaPredicted RBP20.18■□□□□ 0.82
RDX-201ENST00000343115 CEBPAP49715 358 aaPredicted RBP20.17■□□□□ 0.82
RDX-201ENST00000343115 NME9Q86XW9 330 aa20.17■□□□□ 0.82
RDX-201ENST00000343115 MIS18AQ9NYP9 233 aa20.17■□□□□ 0.82
RDX-201ENST00000343115 COL17A1Q9UMD9 1497 aaPredicted RBP20.17■□□□□ 0.82
RDX-201ENST00000343115 SEC24BO95487 1268 aa20.17■□□□□ 0.82
RDX-201ENST00000343115 NLRP6P59044 892 aa20.17■□□□□ 0.82
RDX-201ENST00000343115 SHANK2Q9UPX8 1470 aa20.17■□□□□ 0.82
RDX-201ENST00000343115 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
RDX-201ENST00000343115 FCHSD2O94868 740 aa20.16■□□□□ 0.82
RDX-201ENST00000343115 CSB-PGBD3P0DP91 1061 aa20.16■□□□□ 0.82
RDX-201ENST00000343115 CDC45O75419 566 aa20.16■□□□□ 0.82
RDX-201ENST00000343115 CCDC9Q9Y3X0 531 aaKnown RBP20.16■□□□□ 0.82
RDX-201ENST00000343115 ASXL1Q8IXJ9 1541 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms