RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 JCADQ9P266 1359 aa21.24■□□□□ 0.99
ERCC1-203ENST00000340192 ILDR2Q71H61 639 aa21.24■□□□□ 0.99
ERCC1-203ENST00000340192 SIRT1Q96EB6 747 aa21.23■□□□□ 0.99
ERCC1-203ENST00000340192 SHPRHQ149N8 1683 aa21.22■□□□□ 0.99
ERCC1-203ENST00000340192 DLC1Q96QB1 1528 aa21.22■□□□□ 0.99
ERCC1-203ENST00000340192 FMN2Q9NZ56 1722 aa21.21■□□□□ 0.99
ERCC1-203ENST00000340192 ORAI2Q96SN7 254 aa21.21■□□□□ 0.99
ERCC1-203ENST00000340192 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
ERCC1-203ENST00000340192 DDX17Q92841 729 aaKnown RBP21.2■□□□□ 0.98
ERCC1-203ENST00000340192 PRAM1Q96QH2 718 aa21.2■□□□□ 0.98
ERCC1-203ENST00000340192 KIAA1210Q9ULL0 1709 aa21.19■□□□□ 0.98
ERCC1-203ENST00000340192 SAFB2Q14151 953 aaKnown RBP eCLIP21.17■□□□□ 0.98
ERCC1-203ENST00000340192 SIN3AQ96ST3 1273 aa21.17■□□□□ 0.98
ERCC1-203ENST00000340192 TRAK1Q9UPV9 953 aa21.17■□□□□ 0.98
ERCC1-203ENST00000340192 NUTM2FA1L443 756 aa21.16■□□□□ 0.98
ERCC1-203ENST00000340192 POGKQ9P215 609 aa21.16■□□□□ 0.98
ERCC1-203ENST00000340192 RGPD8O14715 1765 aaPredicted RBP21.15■□□□□ 0.98
ERCC1-203ENST00000340192 ARHGEF28Q8N1W1 1705 aaKnown RBP21.15■□□□□ 0.98
ERCC1-203ENST00000340192 ESCO1Q5FWF5 840 aa21.15■□□□□ 0.98
ERCC1-203ENST00000340192 SPATA31A6Q5VVP1 1343 aa21.14■□□□□ 0.97
ERCC1-203ENST00000340192 NEUROD1Q13562 356 aa21.13■□□□□ 0.97
ERCC1-203ENST00000340192 L3MBTL2Q969R5 705 aa21.13■□□□□ 0.97
ERCC1-203ENST00000340192 LRRC59Q96AG4 307 aaKnown RBP21.13■□□□□ 0.97
ERCC1-203ENST00000340192 LRP6O75581 1613 aa21.13■□□□□ 0.97
ERCC1-203ENST00000340192 ADGRB2O60241 1585 aa21.13■□□□□ 0.97
ERCC1-203ENST00000340192 RGS17Q9UGC6 210 aaPredicted RBP21.11■□□□□ 0.97
ERCC1-203ENST00000340192 KIF1AQ12756 1690 aa21.11■□□□□ 0.97
ERCC1-203ENST00000340192 SOS2Q07890 1332 aaPredicted RBP21.1■□□□□ 0.97
ERCC1-203ENST00000340192 PNPLA6Q8IY17 1366 aa21.09■□□□□ 0.97
ERCC1-203ENST00000340192 NPHP3Q7Z494 1330 aa21.08■□□□□ 0.97
ERCC1-203ENST00000340192 PXDNQ92626 1479 aa21.08■□□□□ 0.97
ERCC1-203ENST00000340192 USP32Q8NFA0 1604 aa21.08■□□□□ 0.97
ERCC1-203ENST00000340192 HIRIP3Q9BW71 556 aaPredicted RBP21.08■□□□□ 0.97
ERCC1-203ENST00000340192 MINK1Q8N4C8 1332 aaPredicted RBP21.07■□□□□ 0.96
ERCC1-203ENST00000340192 FOXO3O43524 673 aa21.07■□□□□ 0.96
ERCC1-203ENST00000340192 NBPF1Q3BBV0 1214 aa21.07■□□□□ 0.96
ERCC1-203ENST00000340192 NUTM2BA6NNL0 878 aaPredicted RBP21.06■□□□□ 0.96
ERCC1-203ENST00000340192 NUTM2EB1AL46 878 aaPredicted RBP21.06■□□□□ 0.96
ERCC1-203ENST00000340192 NUTM2AQ8IVF1 878 aaPredicted RBP21.06■□□□□ 0.96
ERCC1-203ENST00000340192 TRPM1Q7Z4N2 1603 aa21.05■□□□□ 0.96
ERCC1-203ENST00000340192 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
ERCC1-203ENST00000340192 XPCQ01831 940 aaPredicted RBP21.04■□□□□ 0.96
ERCC1-203ENST00000340192 ANKARQ7Z5J8 1434 aa21.04■□□□□ 0.96
ERCC1-203ENST00000340192 COL22A1Q8NFW1 1626 aaPredicted RBP21.03■□□□□ 0.96
ERCC1-203ENST00000340192 SOCS7O14512 581 aa21.02■□□□□ 0.96
ERCC1-203ENST00000340192 PHF8Q9UPP1 1060 aa21.02■□□□□ 0.96
ERCC1-203ENST00000340192 TULP4Q9NRJ4 1543 aa21.02■□□□□ 0.96
ERCC1-203ENST00000340192 EIF3AQ14152 1382 aaKnown RBP21■□□□□ 0.95
ERCC1-203ENST00000340192 WASLO00401 505 aaPredicted RBP21■□□□□ 0.95
ERCC1-203ENST00000340192 POTEAQ6S8J7 498 aa21■□□□□ 0.95
ERCC1-203ENST00000340192 PRR36Q9H6K5 1346 aa20.98■□□□□ 0.95
ERCC1-203ENST00000340192 ITSN1Q15811 1721 aa20.98■□□□□ 0.95
ERCC1-203ENST00000340192 QRICH2Q9H0J4 1663 aa20.97■□□□□ 0.95
ERCC1-203ENST00000340192 KRT28Q7Z3Y7 464 aa20.97■□□□□ 0.95
ERCC1-203ENST00000340192 PMFBP1Q8TBY8 1022 aa20.96■□□□□ 0.95
ERCC1-203ENST00000340192 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
ERCC1-203ENST00000340192 ROCK2O75116 1388 aaKnown RBP20.95■□□□□ 0.94
ERCC1-203ENST00000340192 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
ERCC1-203ENST00000340192 SPATA31A3Q5VYP0 1347 aa20.94■□□□□ 0.94
ERCC1-203ENST00000340192 CENPJQ9HC77 1338 aaPredicted RBP20.94■□□□□ 0.94
ERCC1-203ENST00000340192 ATP7BP35670 1465 aa20.94■□□□□ 0.94
ERCC1-203ENST00000340192 MARF1Q9Y4F3 1742 aaKnown RBP20.93■□□□□ 0.94
ERCC1-203ENST00000340192 ADAMTS2O95450 1211 aa20.93■□□□□ 0.94
ERCC1-203ENST00000340192 PSME1Q06323 249 aa20.93■□□□□ 0.94
ERCC1-203ENST00000340192 ZNF772Q68DY9 489 aaPredicted RBP20.93■□□□□ 0.94
ERCC1-203ENST00000340192 C8orf37Q96NL8 207 aa20.93■□□□□ 0.94
ERCC1-203ENST00000340192 CDK19Q9BWU1 502 aa20.93■□□□□ 0.94
ERCC1-203ENST00000340192 AFF2P51816 1311 aa20.92■□□□□ 0.94
ERCC1-203ENST00000340192 TNS3Q68CZ2 1445 aa20.92■□□□□ 0.94
ERCC1-203ENST00000340192 TOPAZ1Q8N9V7 1692 aa20.92■□□□□ 0.94
ERCC1-203ENST00000340192 TRPM3Q9HCF6 1732 aaPredicted RBP20.92■□□□□ 0.94
ERCC1-203ENST00000340192 NUDT16Q96DE0 195 aaKnown RBP20.91■□□□□ 0.94
ERCC1-203ENST00000340192 SBNO1A3KN83 1393 aa20.9■□□□□ 0.94
ERCC1-203ENST00000340192 PCGF6Q9BYE7 350 aa20.89■□□□□ 0.93
ERCC1-203ENST00000340192 NGLY1Q96IV0 654 aa20.88■□□□□ 0.93
ERCC1-203ENST00000340192 GPRASP1Q5JY77 1395 aa20.87■□□□□ 0.93
ERCC1-203ENST00000340192 ALS2Q96Q42 1657 aa20.87■□□□□ 0.93
ERCC1-203ENST00000340192 NGDNQ8NEJ9 315 aaKnown RBP20.87■□□□□ 0.93
ERCC1-203ENST00000340192 ABCA3Q99758 1704 aa20.87■□□□□ 0.93
ERCC1-203ENST00000340192 RALGAPBQ86X10 1494 aa20.86■□□□□ 0.93
ERCC1-203ENST00000340192 ARHGEF10O15013 1369 aa20.85■□□□□ 0.93
ERCC1-203ENST00000340192 SRPK2P78362 688 aaKnown RBP20.85■□□□□ 0.93
ERCC1-203ENST00000340192 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
ERCC1-203ENST00000340192 CCDC61Q9Y6R9 512 aa20.84■□□□□ 0.93
ERCC1-203ENST00000340192 PLEKHG5O94827 1062 aa20.82■□□□□ 0.92
ERCC1-203ENST00000340192 CABLES1Q8TDN4 633 aa20.82■□□□□ 0.92
ERCC1-203ENST00000340192 CARD11Q9BXL7 1154 aa20.82■□□□□ 0.92
ERCC1-203ENST00000340192 CABP2Q9NPB3 220 aa20.82■□□□□ 0.92
ERCC1-203ENST00000340192 RXRBP28702 533 aa20.81■□□□□ 0.92
ERCC1-203ENST00000340192 FNBP4Q8N3X1 1017 aaPredicted RBP20.81■□□□□ 0.92
ERCC1-203ENST00000340192 QTRT2Q9H974 415 aaKnown RBP20.81■□□□□ 0.92
ERCC1-203ENST00000340192 POLR3AO14802 1390 aaPredicted RBP20.81■□□□□ 0.92
ERCC1-203ENST00000340192 ACEP12821 1306 aa20.8■□□□□ 0.92
ERCC1-203ENST00000340192 PPIP5K1Q6PFW1 1433 aa20.8■□□□□ 0.92
ERCC1-203ENST00000340192 PLEKHG3A1L390 1219 aa20.8■□□□□ 0.92
ERCC1-203ENST00000340192 HAP1P54257 671 aaPredicted RBP20.8■□□□□ 0.92
ERCC1-203ENST00000340192 USP21Q9UK80 565 aa20.8■□□□□ 0.92
ERCC1-203ENST00000340192 EVC2Q86UK5 1308 aa20.79■□□□□ 0.92
ERCC1-203ENST00000340192 PAK3O75914 559 aaPredicted RBP20.79■□□□□ 0.92
ERCC1-203ENST00000340192 CRYBG1Q9Y4K1 1723 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms