RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TULP4Q9NRJ4 1543 aa20.2■□□□□ 0.82
NIPAL3-202ENST00000339255 KCNA6P17658 529 aa20.19■□□□□ 0.82
NIPAL3-202ENST00000339255 EVC2Q86UK5 1308 aa20.19■□□□□ 0.82
NIPAL3-202ENST00000339255 PLEKHH1Q9ULM0 1364 aa20.18■□□□□ 0.82
NIPAL3-202ENST00000339255 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
NIPAL3-202ENST00000339255 SAFB2Q14151 953 aaKnown RBP eCLIP20.17■□□□□ 0.82
NIPAL3-202ENST00000339255 WAPLQ7Z5K2 1190 aa20.17■□□□□ 0.82
NIPAL3-202ENST00000339255 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
NIPAL3-202ENST00000339255 MYOM1P52179 1685 aa20.16■□□□□ 0.82
NIPAL3-202ENST00000339255 MINK1Q8N4C8 1332 aaPredicted RBP20.15■□□□□ 0.82
NIPAL3-202ENST00000339255 STRCP1A6NGW2 1772 aa20.15■□□□□ 0.82
NIPAL3-202ENST00000339255 NALCNQ8IZF0 1738 aa20.13■□□□□ 0.81
NIPAL3-202ENST00000339255 DDX10Q13206 875 aaKnown RBP20.12■□□□□ 0.81
NIPAL3-202ENST00000339255 POLR3GLQ9BT43 218 aa20.12■□□□□ 0.81
NIPAL3-202ENST00000339255 CDC42BPGQ6DT37 1551 aa20.11■□□□□ 0.81
NIPAL3-202ENST00000339255 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
NIPAL3-202ENST00000339255 ATAD2Q6PL18 1390 aa20.11■□□□□ 0.81
NIPAL3-202ENST00000339255 NINLQ9Y2I6 1382 aa20.11■□□□□ 0.81
NIPAL3-202ENST00000339255 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
NIPAL3-202ENST00000339255 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
NIPAL3-202ENST00000339255 NCOA3Q9Y6Q9 1424 aa20.09■□□□□ 0.81
NIPAL3-202ENST00000339255 WASLO00401 505 aaPredicted RBP20.08■□□□□ 0.81
NIPAL3-202ENST00000339255 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.81
NIPAL3-202ENST00000339255 ITSN1Q15811 1721 aa20.08■□□□□ 0.81
NIPAL3-202ENST00000339255 FMN2Q9NZ56 1722 aa20.07■□□□□ 0.8
NIPAL3-202ENST00000339255 CDK19Q9BWU1 502 aa20.07■□□□□ 0.8
NIPAL3-202ENST00000339255 PROSER2Q86WR7 435 aaPredicted RBP20.05■□□□□ 0.8
NIPAL3-202ENST00000339255 TOPAZ1Q8N9V7 1692 aa20.05■□□□□ 0.8
NIPAL3-202ENST00000339255 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
NIPAL3-202ENST00000339255 ANKARQ7Z5J8 1434 aa20.03■□□□□ 0.8
NIPAL3-202ENST00000339255 ATP7BP35670 1465 aa20.03■□□□□ 0.8
NIPAL3-202ENST00000339255 XIRP1Q702N8 1843 aaKnown RBP20.03■□□□□ 0.8
NIPAL3-202ENST00000339255 DCCP43146 1447 aa20.02■□□□□ 0.8
NIPAL3-202ENST00000339255 ZNF335Q9H4Z2 1342 aaPredicted RBP20.01■□□□□ 0.79
NIPAL3-202ENST00000339255 TMEM94Q12767 1356 aa20.01■□□□□ 0.79
NIPAL3-202ENST00000339255 C14orf37Q86TY3 774 aa20■□□□□ 0.79
NIPAL3-202ENST00000339255 USP32Q8NFA0 1604 aa20■□□□□ 0.79
NIPAL3-202ENST00000339255 LRRC7Q96NW7 1537 aa20■□□□□ 0.79
NIPAL3-202ENST00000339255 RGPD8O14715 1765 aaPredicted RBP19.98■□□□□ 0.79
NIPAL3-202ENST00000339255 ANKRD36BQ8N2N9 1353 aa19.98■□□□□ 0.79
NIPAL3-202ENST00000339255 CCDC61Q9Y6R9 512 aa19.98■□□□□ 0.79
NIPAL3-202ENST00000339255 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
NIPAL3-202ENST00000339255 NUDT16Q96DE0 195 aaKnown RBP19.97■□□□□ 0.79
NIPAL3-202ENST00000339255 C19orf44Q9H6X5 657 aa19.97■□□□□ 0.79
NIPAL3-202ENST00000339255 PPIP5K1Q6PFW1 1433 aa19.97■□□□□ 0.79
NIPAL3-202ENST00000339255 PANK3Q9H999 370 aa19.97■□□□□ 0.79
NIPAL3-202ENST00000339255 AKAP12Q02952 1782 aa19.96■□□□□ 0.79
NIPAL3-202ENST00000339255 TERF2IPQ9NYB0 399 aa19.96■□□□□ 0.79
NIPAL3-202ENST00000339255 MSH6P52701 1360 aa19.95■□□□□ 0.78
NIPAL3-202ENST00000339255 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
NIPAL3-202ENST00000339255 PRR36Q9H6K5 1346 aa19.94■□□□□ 0.78
NIPAL3-202ENST00000339255 RBM33Q96EV2 1170 aaKnown RBP19.94■□□□□ 0.78
NIPAL3-202ENST00000339255 MON2Q7Z3U7 1717 aa19.93■□□□□ 0.78
NIPAL3-202ENST00000339255 CD163L1Q9NR16 1453 aa19.93■□□□□ 0.78
NIPAL3-202ENST00000339255 LTBP4Q8N2S1 1624 aa19.92■□□□□ 0.78
NIPAL3-202ENST00000339255 PER1O15534 1290 aaPredicted RBP19.92■□□□□ 0.78
NIPAL3-202ENST00000339255 CABP1Q9NZU7 370 aa19.92■□□□□ 0.78
NIPAL3-202ENST00000339255 A0A1W2PP64 1363 aa19.92■□□□□ 0.78
NIPAL3-202ENST00000339255 HDGFL2Q7Z4V5 671 aaPredicted RBP19.91■□□□□ 0.78
NIPAL3-202ENST00000339255 KNSTRNQ9Y448 316 aa19.91■□□□□ 0.78
NIPAL3-202ENST00000339255 CPSF1Q10570 1443 aaKnown RBP19.91■□□□□ 0.78
NIPAL3-202ENST00000339255 ANP32CO43423 234 aa19.91■□□□□ 0.78
NIPAL3-202ENST00000339255 ATF3P18847 181 aa19.91■□□□□ 0.78
NIPAL3-202ENST00000339255 CADPS2Q86UW7 1296 aa19.91■□□□□ 0.78
NIPAL3-202ENST00000339255 KTN1Q86UP2 1357 aaKnown RBP19.9■□□□□ 0.78
NIPAL3-202ENST00000339255 NPC1L1Q9UHC9 1359 aa19.9■□□□□ 0.78
NIPAL3-202ENST00000339255 KIF1AQ12756 1690 aa19.9■□□□□ 0.78
NIPAL3-202ENST00000339255 PLEKHG3A1L390 1219 aa19.9■□□□□ 0.78
NIPAL3-202ENST00000339255 NSD3Q9BZ95 1437 aa19.88■□□□□ 0.77
NIPAL3-202ENST00000339255 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
NIPAL3-202ENST00000339255 KIF20BQ96Q89 1820 aa19.87■□□□□ 0.77
NIPAL3-202ENST00000339255 NUTM2FA1L443 756 aa19.87■□□□□ 0.77
NIPAL3-202ENST00000339255 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
NIPAL3-202ENST00000339255 MST1RQ04912 1400 aa19.87■□□□□ 0.77
NIPAL3-202ENST00000339255 NRKQ7Z2Y5 1582 aa19.87■□□□□ 0.77
NIPAL3-202ENST00000339255 EDC4Q6P2E9 1401 aaKnown RBP19.86■□□□□ 0.77
NIPAL3-202ENST00000339255 CARD14Q9BXL6 1004 aa19.86■□□□□ 0.77
NIPAL3-202ENST00000339255 CGNL1Q0VF96 1302 aa19.86■□□□□ 0.77
NIPAL3-202ENST00000339255 NSD2O96028 1365 aa19.86■□□□□ 0.77
NIPAL3-202ENST00000339255 C1orf167Q5SNV9 1468 aa19.85■□□□□ 0.77
NIPAL3-202ENST00000339255 ANKRD26Q9UPS8 1709 aa19.85■□□□□ 0.77
NIPAL3-202ENST00000339255 AMER1Q5JTC6 1135 aaPredicted RBP19.84■□□□□ 0.77
NIPAL3-202ENST00000339255 ACEP12821 1306 aa19.84■□□□□ 0.77
NIPAL3-202ENST00000339255 PRKRIP1Q9H875 184 aaPredicted RBP19.83■□□□□ 0.76
NIPAL3-202ENST00000339255 USP6P35125 1406 aa19.83■□□□□ 0.76
NIPAL3-202ENST00000339255 PHF8Q9UPP1 1060 aa19.82■□□□□ 0.76
NIPAL3-202ENST00000339255 BRD4O60885 1362 aaPredicted RBP19.82■□□□□ 0.76
NIPAL3-202ENST00000339255 NGDNQ8NEJ9 315 aaKnown RBP19.81■□□□□ 0.76
NIPAL3-202ENST00000339255 RALBP1Q15311 655 aa19.81■□□□□ 0.76
NIPAL3-202ENST00000339255 MIER1Q8N108 512 aa19.81■□□□□ 0.76
NIPAL3-202ENST00000339255 PARD3Q8TEW0 1356 aa19.81■□□□□ 0.76
NIPAL3-202ENST00000339255 ESCO1Q5FWF5 840 aa19.8■□□□□ 0.76
NIPAL3-202ENST00000339255 PMFBP1Q8TBY8 1022 aa19.78■□□□□ 0.76
NIPAL3-202ENST00000339255 IQSEC2Q5JU85 1478 aa19.78■□□□□ 0.76
NIPAL3-202ENST00000339255 SSH2Q76I76 1423 aa19.77■□□□□ 0.76
NIPAL3-202ENST00000339255 TTC21AQ8NDW8 1320 aa19.76■□□□□ 0.75
NIPAL3-202ENST00000339255 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
NIPAL3-202ENST00000339255 SLAIN2Q9P270 581 aa19.75■□□□□ 0.75
NIPAL3-202ENST00000339255 ORAI2Q96SN7 254 aa19.75■□□□□ 0.75
NIPAL3-202ENST00000339255 USP54Q70EL1 1684 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms