RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 CDC42BPGQ6DT37 1551 aa12.06□□□□□ -0.48
PACRG-201ENST00000337019 AHDC1Q5TGY3 1603 aaPredicted RBP12.05□□□□□ -0.48
PACRG-201ENST00000337019 C1orf167Q5SNV9 1468 aa12.05□□□□□ -0.48
PACRG-201ENST00000337019 WAPLQ7Z5K2 1190 aa12.05□□□□□ -0.48
PACRG-201ENST00000337019 SIRT1Q96EB6 747 aa12.04□□□□□ -0.48
PACRG-201ENST00000337019 NEUROD1Q13562 356 aa12.04□□□□□ -0.48
PACRG-201ENST00000337019 PRAM1Q96QH2 718 aa12.04□□□□□ -0.48
PACRG-201ENST00000337019 DLC1Q96QB1 1528 aa12.03□□□□□ -0.48
PACRG-201ENST00000337019 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
PACRG-201ENST00000337019 ILDR2Q71H61 639 aa12.03□□□□□ -0.48
PACRG-201ENST00000337019 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
PACRG-201ENST00000337019 PLEKHH1Q9ULM0 1364 aa12.03□□□□□ -0.48
PACRG-201ENST00000337019 COL16A1Q07092 1604 aaPredicted RBP12.02□□□□□ -0.48
PACRG-201ENST00000337019 ADGRB1O14514 1584 aa12.02□□□□□ -0.49
PACRG-201ENST00000337019 ESCO1Q5FWF5 840 aa12.01□□□□□ -0.49
PACRG-201ENST00000337019 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
PACRG-201ENST00000337019 EIF3AQ14152 1382 aaKnown RBP12.01□□□□□ -0.49
PACRG-201ENST00000337019 CENPBP07199 599 aaPredicted RBP12□□□□□ -0.49
PACRG-201ENST00000337019 SPATA31A6Q5VVP1 1343 aa12□□□□□ -0.49
PACRG-201ENST00000337019 LRRC59Q96AG4 307 aaKnown RBP12□□□□□ -0.49
PACRG-201ENST00000337019 NPHP3Q7Z494 1330 aa12□□□□□ -0.49
PACRG-201ENST00000337019 NUTM2FA1L443 756 aa12□□□□□ -0.49
PACRG-201ENST00000337019 DIEXFQ68CQ4 756 aaKnown RBP12□□□□□ -0.49
PACRG-201ENST00000337019 SIN3AQ96ST3 1273 aa12□□□□□ -0.49
PACRG-201ENST00000337019 NHSL1Q5SYE7 1610 aa11.99□□□□□ -0.49
PACRG-201ENST00000337019 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
PACRG-201ENST00000337019 ORAI2Q96SN7 254 aa11.99□□□□□ -0.49
PACRG-201ENST00000337019 L3MBTL2Q969R5 705 aa11.98□□□□□ -0.49
PACRG-201ENST00000337019 KIAA1210Q9ULL0 1709 aa11.98□□□□□ -0.49
PACRG-201ENST00000337019 MINK1Q8N4C8 1332 aaPredicted RBP11.97□□□□□ -0.49
PACRG-201ENST00000337019 FMN2Q9NZ56 1722 aa11.97□□□□□ -0.49
PACRG-201ENST00000337019 ADGRB2O60241 1585 aa11.97□□□□□ -0.49
PACRG-201ENST00000337019 DDX17Q92841 729 aaKnown RBP11.97□□□□□ -0.49
PACRG-201ENST00000337019 SHPRHQ149N8 1683 aa11.96□□□□□ -0.49
PACRG-201ENST00000337019 NUTM2BA6NNL0 878 aaPredicted RBP11.96□□□□□ -0.5
PACRG-201ENST00000337019 NUTM2EB1AL46 878 aaPredicted RBP11.96□□□□□ -0.5
PACRG-201ENST00000337019 POTEDQ86YR6 584 aa11.96□□□□□ -0.5
PACRG-201ENST00000337019 NUTM2AQ8IVF1 878 aaPredicted RBP11.96□□□□□ -0.5
PACRG-201ENST00000337019 HIRIP3Q9BW71 556 aaPredicted RBP11.96□□□□□ -0.5
PACRG-201ENST00000337019 KIF1AQ12756 1690 aa11.96□□□□□ -0.5
PACRG-201ENST00000337019 ANKARQ7Z5J8 1434 aa11.96□□□□□ -0.5
PACRG-201ENST00000337019 ROCK2O75116 1388 aaKnown RBP11.95□□□□□ -0.5
PACRG-201ENST00000337019 FOXO3O43524 673 aa11.94□□□□□ -0.5
PACRG-201ENST00000337019 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
PACRG-201ENST00000337019 PNPLA6Q8IY17 1366 aa11.94□□□□□ -0.5
PACRG-201ENST00000337019 SOS2Q07890 1332 aaPredicted RBP11.94□□□□□ -0.5
PACRG-201ENST00000337019 ARHGEF28Q8N1W1 1705 aaKnown RBP11.94□□□□□ -0.5
PACRG-201ENST00000337019 CENPJQ9HC77 1338 aaPredicted RBP11.93□□□□□ -0.5
PACRG-201ENST00000337019 WASLO00401 505 aaPredicted RBP11.93□□□□□ -0.5
PACRG-201ENST00000337019 PSME1Q06323 249 aa11.93□□□□□ -0.5
PACRG-201ENST00000337019 NBPF1Q3BBV0 1214 aa11.93□□□□□ -0.5
PACRG-201ENST00000337019 TULP4Q9NRJ4 1543 aa11.93□□□□□ -0.5
PACRG-201ENST00000337019 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
PACRG-201ENST00000337019 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
PACRG-201ENST00000337019 LRP6O75581 1613 aa11.91□□□□□ -0.5
PACRG-201ENST00000337019 PXDNQ92626 1479 aa11.9□□□□□ -0.5
PACRG-201ENST00000337019 GPRASP1Q5JY77 1395 aa11.9□□□□□ -0.5
PACRG-201ENST00000337019 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.5
PACRG-201ENST00000337019 ZNF772Q68DY9 489 aaPredicted RBP11.9□□□□□ -0.5
PACRG-201ENST00000337019 KRT28Q7Z3Y7 464 aa11.9□□□□□ -0.5
PACRG-201ENST00000337019 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
PACRG-201ENST00000337019 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
PACRG-201ENST00000337019 PMFBP1Q8TBY8 1022 aa11.89□□□□□ -0.51
PACRG-201ENST00000337019 TRPM1Q7Z4N2 1603 aa11.89□□□□□ -0.51
PACRG-201ENST00000337019 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
PACRG-201ENST00000337019 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
PACRG-201ENST00000337019 ADAMTS2O95450 1211 aa11.88□□□□□ -0.51
PACRG-201ENST00000337019 CDK19Q9BWU1 502 aa11.88□□□□□ -0.51
PACRG-201ENST00000337019 TNS3Q68CZ2 1445 aa11.88□□□□□ -0.51
PACRG-201ENST00000337019 ARHGEF10O15013 1369 aa11.87□□□□□ -0.51
PACRG-201ENST00000337019 NUDT16Q96DE0 195 aaKnown RBP11.87□□□□□ -0.51
PACRG-201ENST00000337019 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
PACRG-201ENST00000337019 ATP7BP35670 1465 aa11.87□□□□□ -0.51
PACRG-201ENST00000337019 SPATA31A3Q5VYP0 1347 aa11.87□□□□□ -0.51
PACRG-201ENST00000337019 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
PACRG-201ENST00000337019 SBNO1A3KN83 1393 aa11.87□□□□□ -0.51
PACRG-201ENST00000337019 ITSN1Q15811 1721 aa11.87□□□□□ -0.51
PACRG-201ENST00000337019 RALGAPBQ86X10 1494 aa11.86□□□□□ -0.51
PACRG-201ENST00000337019 AFF2P51816 1311 aa11.86□□□□□ -0.51
PACRG-201ENST00000337019 PRR36Q9H6K5 1346 aa11.86□□□□□ -0.51
PACRG-201ENST00000337019 USP32Q8NFA0 1604 aa11.86□□□□□ -0.51
PACRG-201ENST00000337019 NGLY1Q96IV0 654 aa11.86□□□□□ -0.51
PACRG-201ENST00000337019 EVC2Q86UK5 1308 aa11.85□□□□□ -0.51
PACRG-201ENST00000337019 COL22A1Q8NFW1 1626 aaPredicted RBP11.85□□□□□ -0.51
PACRG-201ENST00000337019 QRICH2Q9H0J4 1663 aa11.85□□□□□ -0.51
PACRG-201ENST00000337019 NBPF8Q3BBV2 869 aa11.85□□□□□ -0.51
PACRG-201ENST00000337019 RGS17Q9UGC6 210 aaPredicted RBP11.85□□□□□ -0.51
PACRG-201ENST00000337019 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
PACRG-201ENST00000337019 POTEAQ6S8J7 498 aa11.84□□□□□ -0.51
PACRG-201ENST00000337019 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
PACRG-201ENST00000337019 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
PACRG-201ENST00000337019 RGPD8O14715 1765 aaPredicted RBP11.83□□□□□ -0.52
PACRG-201ENST00000337019 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
PACRG-201ENST00000337019 PPIP5K1Q6PFW1 1433 aa11.82□□□□□ -0.52
PACRG-201ENST00000337019 RXRBP28702 533 aa11.81□□□□□ -0.52
PACRG-201ENST00000337019 USP21Q9UK80 565 aa11.81□□□□□ -0.52
PACRG-201ENST00000337019 TIMELESSQ9UNS1 1208 aa11.81□□□□□ -0.52
PACRG-201ENST00000337019 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
PACRG-201ENST00000337019 ATAD2Q6PL18 1390 aa11.8□□□□□ -0.52
PACRG-201ENST00000337019 ACEP12821 1306 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms