RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 C9orf78Q9NZ63 289 aaPredicted RBP19.27■□□□□ 0.68
HDAC5-202ENST00000336057 FRAT2O75474 233 aaPredicted RBP19.26■□□□□ 0.67
HDAC5-202ENST00000336057 TSR2Q969E8 191 aaKnown RBP19.26■□□□□ 0.67
HDAC5-202ENST00000336057 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
HDAC5-202ENST00000336057 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
HDAC5-202ENST00000336057 CCDC141Q6ZP82 1450 aa19.25■□□□□ 0.67
HDAC5-202ENST00000336057 ZKSCAN1P17029 563 aaPredicted RBP19.25■□□□□ 0.67
HDAC5-202ENST00000336057 MAGI1Q96QZ7 1491 aaPredicted RBP19.25■□□□□ 0.67
HDAC5-202ENST00000336057 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
HDAC5-202ENST00000336057 SLFN5Q08AF3 891 aa19.25■□□□□ 0.67
HDAC5-202ENST00000336057 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
HDAC5-202ENST00000336057 NEXNQ0ZGT2 675 aa19.24■□□□□ 0.67
HDAC5-202ENST00000336057 PRAM1Q96QH2 718 aa19.24■□□□□ 0.67
HDAC5-202ENST00000336057 H3BQV1 296 aa19.23■□□□□ 0.67
HDAC5-202ENST00000336057 IFFO2Q5TF58 517 aa19.23■□□□□ 0.67
HDAC5-202ENST00000336057 HSP90AA2PQ14568 343 aaPredicted RBP19.23■□□□□ 0.67
HDAC5-202ENST00000336057 NOB1Q9ULX3 412 aaKnown RBP19.23■□□□□ 0.67
HDAC5-202ENST00000336057 TULP1O00294 542 aaPredicted RBP19.23■□□□□ 0.67
HDAC5-202ENST00000336057 IFIT2P09913 472 aaKnown RBP19.22■□□□□ 0.67
HDAC5-202ENST00000336057 CCDC34Q96HJ3 373 aa19.22■□□□□ 0.67
HDAC5-202ENST00000336057 FAM69CQ0P6D2 419 aa19.22■□□□□ 0.67
HDAC5-202ENST00000336057 SF3A1Q15459 793 aaKnown RBP19.22■□□□□ 0.67
HDAC5-202ENST00000336057 FAM184AQ8NB25 1140 aa19.22■□□□□ 0.67
HDAC5-202ENST00000336057 PLB1Q6P1J6 1458 aa19.21■□□□□ 0.67
HDAC5-202ENST00000336057 GCC1Q96CN9 775 aa19.21■□□□□ 0.67
HDAC5-202ENST00000336057 MRE11P49959 708 aa19.2■□□□□ 0.66
HDAC5-202ENST00000336057 MVPQ14764 893 aaKnown RBP19.2■□□□□ 0.66
HDAC5-202ENST00000336057 TWISTNBQ3B726 338 aaPredicted RBP19.2■□□□□ 0.66
HDAC5-202ENST00000336057 MCTP1Q6DN14 999 aa19.2■□□□□ 0.66
HDAC5-202ENST00000336057 TRAK2O60296 914 aa19.2■□□□□ 0.66
HDAC5-202ENST00000336057 CHMP4CQ96CF2 233 aa19.2■□□□□ 0.66
HDAC5-202ENST00000336057 MSH5O43196 834 aa19.19■□□□□ 0.66
HDAC5-202ENST00000336057 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
HDAC5-202ENST00000336057 HSP90AB4PQ58FF6 505 aa19.19■□□□□ 0.66
HDAC5-202ENST00000336057 WWC1Q8IX03 1113 aa19.19■□□□□ 0.66
HDAC5-202ENST00000336057 CCDC9Q9Y3X0 531 aaKnown RBP19.18■□□□□ 0.66
HDAC5-202ENST00000336057 DDX58O95786 925 aaKnown RBP19.18■□□□□ 0.66
HDAC5-202ENST00000336057 RPGRIP1LQ68CZ1 1315 aa19.17■□□□□ 0.66
HDAC5-202ENST00000336057 C1orf115Q9H7X2 142 aa19.17■□□□□ 0.66
HDAC5-202ENST00000336057 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
HDAC5-202ENST00000336057 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
HDAC5-202ENST00000336057 CABP1Q9NZU7 370 aa19.16■□□□□ 0.66
HDAC5-202ENST00000336057 G3BP1Q13283 466 aaKnown RBP eCLIP19.16■□□□□ 0.669e-14■■□□□ 12.4
HDAC5-202ENST00000336057 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
HDAC5-202ENST00000336057 RNF20Q5VTR2 975 aa19.15■□□□□ 0.66
HDAC5-202ENST00000336057 CDK19Q9BWU1 502 aa19.15■□□□□ 0.66
HDAC5-202ENST00000336057 UBTFL1P0CB47 393 aaPredicted RBP19.15■□□□□ 0.66
HDAC5-202ENST00000336057 GOLGA6L19H0YKK7 550 aa19.15■□□□□ 0.66
HDAC5-202ENST00000336057 PSME1Q06323 249 aa19.15■□□□□ 0.66
HDAC5-202ENST00000336057 ERC2O15083 957 aa19.15■□□□□ 0.66
HDAC5-202ENST00000336057 SMC3Q9UQE7 1217 aa19.15■□□□□ 0.66
HDAC5-202ENST00000336057 GNAI3P08754 354 aa19.14■□□□□ 0.66
HDAC5-202ENST00000336057 NSD3Q9BZ95 1437 aa19.14■□□□□ 0.65
HDAC5-202ENST00000336057 TOMM22Q9NS69 142 aa19.14■□□□□ 0.65
HDAC5-202ENST00000336057 BRPF3Q9ULD4 1205 aa19.14■□□□□ 0.65
HDAC5-202ENST00000336057 C20orf194Q5TEA3 1177 aa19.13■□□□□ 0.65
HDAC5-202ENST00000336057 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
HDAC5-202ENST00000336057 GRIN2AQ12879 1464 aa19.13■□□□□ 0.65
HDAC5-202ENST00000336057 BECN2A8MW95 431 aa19.13■□□□□ 0.65
HDAC5-202ENST00000336057 ISY1Q9ULR0 285 aaKnown RBP19.13■□□□□ 0.65
HDAC5-202ENST00000336057 RABEP1Q15276 862 aa19.13■□□□□ 0.65
HDAC5-202ENST00000336057 KIF14Q15058 1648 aa19.13■□□□□ 0.65
HDAC5-202ENST00000336057 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
HDAC5-202ENST00000336057 NLRP6P59044 892 aa19.13■□□□□ 0.65
HDAC5-202ENST00000336057 FAM43AQ8N2R8 423 aa19.12■□□□□ 0.65
HDAC5-202ENST00000336057 LRRFIP1Q32MZ4 808 aaKnown RBP19.12■□□□□ 0.65
HDAC5-202ENST00000336057 GAS2L2Q8NHY3 880 aa19.12■□□□□ 0.65
HDAC5-202ENST00000336057 VPS37CA5D8V6 355 aaPredicted RBP19.11■□□□□ 0.65
HDAC5-202ENST00000336057 CCDC30Q5VVM6 783 aa19.11■□□□□ 0.65
HDAC5-202ENST00000336057 ATAD2Q6PL18 1390 aa19.1■□□□□ 0.65
HDAC5-202ENST00000336057 NASPP49321 788 aaPredicted RBP19.1■□□□□ 0.65
HDAC5-202ENST00000336057 CHD1LQ86WJ1 897 aa19.09■□□□□ 0.65
HDAC5-202ENST00000336057 ZNF428Q96B54 188 aa19.09■□□□□ 0.65
HDAC5-202ENST00000336057 FCHSD2O94868 740 aa19.08■□□□□ 0.65
HDAC5-202ENST00000336057 NEK4P51957 841 aa19.08■□□□□ 0.65
HDAC5-202ENST00000336057 TXNDC2Q86VQ3 553 aa19.08■□□□□ 0.65
HDAC5-202ENST00000336057 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.65
HDAC5-202ENST00000336057 TMPOP42166 694 aaKnown RBP19.08■□□□□ 0.65
HDAC5-202ENST00000336057 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.65
HDAC5-202ENST00000336057 SULT6B1Q6IMI4 303 aa19.08■□□□□ 0.65
HDAC5-202ENST00000336057 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.08■□□□□ 0.64
HDAC5-202ENST00000336057 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
HDAC5-202ENST00000336057 ZNF692Q9BU19 519 aaPredicted RBP19.07■□□□□ 0.64
HDAC5-202ENST00000336057 SURF6O75683 361 aaKnown RBP19.07■□□□□ 0.64
HDAC5-202ENST00000336057 UGGT2Q9NYU1 1516 aa19.07■□□□□ 0.64
HDAC5-202ENST00000336057 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
HDAC5-202ENST00000336057 MCM2P49736 904 aa19.07■□□□□ 0.64
HDAC5-202ENST00000336057 BICD2Q8TD16 824 aa19.07■□□□□ 0.64
HDAC5-202ENST00000336057 SKAP1Q86WV1 359 aa19.06■□□□□ 0.64
HDAC5-202ENST00000336057 IL27Q8NEV9 243 aa19.06■□□□□ 0.64
HDAC5-202ENST00000336057 GNAI2P04899 355 aa19.06■□□□□ 0.64
HDAC5-202ENST00000336057 RARSP54136 660 aaKnown RBP19.06■□□□□ 0.64
HDAC5-202ENST00000336057 CPLX2Q6PUV4 134 aaKnown RBP19.06■□□□□ 0.64
HDAC5-202ENST00000336057 CNTROBQ8N137 903 aa19.06■□□□□ 0.64
HDAC5-202ENST00000336057 DUSP27Q5VZP5 1158 aa19.05■□□□□ 0.64
HDAC5-202ENST00000336057 CAVIN1Q6NZI2 390 aaKnown RBP19.05■□□□□ 0.64
HDAC5-202ENST00000336057 RASSF8Q8NHQ8 419 aa19.05■□□□□ 0.64
HDAC5-202ENST00000336057 CLASRPQ8N2M8 674 aaKnown RBP19.05■□□□□ 0.64
HDAC5-202ENST00000336057 RTEL1-TNFRSF6BF6WH68 1400 aa19.04■□□□□ 0.64
HDAC5-202ENST00000336057 MBD3O95983 291 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms