RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SYTL4Q96C24 671 aaPredicted RBP16.05■□□□□ 0.16
VSTM4-202ENST00000332853 ADGRL1O94910 1474 aa16.05■□□□□ 0.16
VSTM4-202ENST00000332853 CD109Q6YHK3 1445 aa16.05■□□□□ 0.16
VSTM4-202ENST00000332853 NOB1Q9ULX3 412 aaKnown RBP16.05■□□□□ 0.16
VSTM4-202ENST00000332853 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
VSTM4-202ENST00000332853 ATF3P18847 181 aa16.05■□□□□ 0.16
VSTM4-202ENST00000332853 RRS1Q15050 365 aaKnown RBP16.05■□□□□ 0.16
VSTM4-202ENST00000332853 NEXNQ0ZGT2 675 aa16.04■□□□□ 0.16
VSTM4-202ENST00000332853 NSD3Q9BZ95 1437 aa16.04■□□□□ 0.16
VSTM4-202ENST00000332853 NLRP2Q9NX02 1062 aa16.04■□□□□ 0.16
VSTM4-202ENST00000332853 RTEL1-TNFRSF6BF6WH68 1400 aa16.03■□□□□ 0.16
VSTM4-202ENST00000332853 GTF2E1P29083 439 aaPredicted RBP16.03■□□□□ 0.16
VSTM4-202ENST00000332853 TOMM22Q9NS69 142 aa16.03■□□□□ 0.16
VSTM4-202ENST00000332853 MAPKBP1O60336 1514 aa16.03■□□□□ 0.16
VSTM4-202ENST00000332853 SULT6B1Q6IMI4 303 aa16.03■□□□□ 0.16
VSTM4-202ENST00000332853 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.16
VSTM4-202ENST00000332853 GPATCH8Q9UKJ3 1502 aaKnown RBP16.02■□□□□ 0.16
VSTM4-202ENST00000332853 WAPLQ7Z5K2 1190 aa16.02■□□□□ 0.16
VSTM4-202ENST00000332853 ADGRF5Q8IZF2 1346 aa16.02■□□□□ 0.16
VSTM4-202ENST00000332853 DIAPH3Q9NSV4 1193 aa16.02■□□□□ 0.15
VSTM4-202ENST00000332853 UGGT2Q9NYU1 1516 aa16.02■□□□□ 0.15
VSTM4-202ENST00000332853 RPRD2Q5VT52 1461 aaKnown RBP16.01■□□□□ 0.15
VSTM4-202ENST00000332853 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
VSTM4-202ENST00000332853 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
VSTM4-202ENST00000332853 FRAT2O75474 233 aaPredicted RBP16.01■□□□□ 0.15
VSTM4-202ENST00000332853 TWISTNBQ3B726 338 aaPredicted RBP16.01■□□□□ 0.15
VSTM4-202ENST00000332853 SYAP1Q96A49 352 aaPredicted RBP16.01■□□□□ 0.15
VSTM4-202ENST00000332853 IFIT2P09913 472 aaKnown RBP16■□□□□ 0.15
VSTM4-202ENST00000332853 RPGRIP1LQ68CZ1 1315 aa16■□□□□ 0.15
VSTM4-202ENST00000332853 PDZRN3Q9UPQ7 1066 aa16■□□□□ 0.15
VSTM4-202ENST00000332853 C22orf23Q9BZE7 217 aa15.99■□□□□ 0.15
VSTM4-202ENST00000332853 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
VSTM4-202ENST00000332853 ANO2Q9NQ90 1003 aa15.99■□□□□ 0.15
VSTM4-202ENST00000332853 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
VSTM4-202ENST00000332853 DDX11L8A8MPP1 907 aa15.97■□□□□ 0.15
VSTM4-202ENST00000332853 NRDCO43847 1150 aa15.97■□□□□ 0.15
VSTM4-202ENST00000332853 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
VSTM4-202ENST00000332853 FAM135AQ9P2D6 1515 aa15.97■□□□□ 0.15
VSTM4-202ENST00000332853 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
VSTM4-202ENST00000332853 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
VSTM4-202ENST00000332853 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
VSTM4-202ENST00000332853 REC8O95072 547 aa15.97■□□□□ 0.15
VSTM4-202ENST00000332853 DDX49Q9Y6V7 483 aaKnown RBP15.97■□□□□ 0.15
VSTM4-202ENST00000332853 HTATSF1O43719 755 aaKnown RBP15.96■□□□□ 0.15
VSTM4-202ENST00000332853 GPRASP1Q5JY77 1395 aa15.96■□□□□ 0.15
VSTM4-202ENST00000332853 G3BP1Q13283 466 aaKnown RBP eCLIP15.96■□□□□ 0.15
VSTM4-202ENST00000332853 FANCAO15360 1455 aa15.96■□□□□ 0.15
VSTM4-202ENST00000332853 ATP10BO94823 1461 aa15.96■□□□□ 0.15
VSTM4-202ENST00000332853 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
VSTM4-202ENST00000332853 USP35Q9P2H5 1018 aa15.96■□□□□ 0.15
VSTM4-202ENST00000332853 UBTFL1P0CB47 393 aaPredicted RBP15.96■□□□□ 0.14
VSTM4-202ENST00000332853 CHAF1AQ13111 956 aaPredicted RBP15.96■□□□□ 0.14
VSTM4-202ENST00000332853 THEMISQ8N1K5 641 aaPredicted RBP15.96■□□□□ 0.14
VSTM4-202ENST00000332853 GSE1Q14687 1217 aa15.95■□□□□ 0.14
VSTM4-202ENST00000332853 DISP3Q9P2K9 1392 aa15.95■□□□□ 0.14
VSTM4-202ENST00000332853 WWC1Q8IX03 1113 aa15.95■□□□□ 0.14
VSTM4-202ENST00000332853 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
VSTM4-202ENST00000332853 XPCQ01831 940 aaPredicted RBP15.95■□□□□ 0.14
VSTM4-202ENST00000332853 INTS3Q68E01 1043 aaKnown RBP15.95■□□□□ 0.14
VSTM4-202ENST00000332853 WDR63Q8IWG1 891 aa15.94■□□□□ 0.14
VSTM4-202ENST00000332853 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
VSTM4-202ENST00000332853 H3BQV1 296 aa15.94■□□□□ 0.14
VSTM4-202ENST00000332853 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
VSTM4-202ENST00000332853 PDE3AQ14432 1141 aa15.94■□□□□ 0.14
VSTM4-202ENST00000332853 IFFO2Q5TF58 517 aa15.94■□□□□ 0.14
VSTM4-202ENST00000332853 NUDT16Q96DE0 195 aaKnown RBP15.94■□□□□ 0.14
VSTM4-202ENST00000332853 SKAP1Q86WV1 359 aa15.93■□□□□ 0.14
VSTM4-202ENST00000332853 CCDC30Q5VVM6 783 aa15.93■□□□□ 0.14
VSTM4-202ENST00000332853 SLFN5Q08AF3 891 aa15.93■□□□□ 0.14
VSTM4-202ENST00000332853 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
VSTM4-202ENST00000332853 ATAD2Q6PL18 1390 aa15.93■□□□□ 0.14
VSTM4-202ENST00000332853 NOS1P29475 1434 aa15.92■□□□□ 0.14
VSTM4-202ENST00000332853 CFAP43Q8NDM7 1665 aa15.92■□□□□ 0.14
VSTM4-202ENST00000332853 CSPP1Q1MSJ5 1256 aa15.92■□□□□ 0.14
VSTM4-202ENST00000332853 RUFY2Q8WXA3 655 aa15.92■□□□□ 0.14
VSTM4-202ENST00000332853 ARID3AQ99856 593 aa15.92■□□□□ 0.14
VSTM4-202ENST00000332853 IDI1Q13907 227 aa15.92■□□□□ 0.14
VSTM4-202ENST00000332853 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
VSTM4-202ENST00000332853 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
VSTM4-202ENST00000332853 KIAA2012Q0VF49 1180 aa15.91■□□□□ 0.14
VSTM4-202ENST00000332853 FAM184AQ8NB25 1140 aa15.91■□□□□ 0.14
VSTM4-202ENST00000332853 TMX4Q9H1E5 349 aaPredicted RBP15.91■□□□□ 0.14
VSTM4-202ENST00000332853 G3V3G9 751 aa15.91■□□□□ 0.14
VSTM4-202ENST00000332853 AAMPQ13685 434 aa15.91■□□□□ 0.14
VSTM4-202ENST00000332853 DCAF8Q5TAQ9 597 aa15.91■□□□□ 0.14
VSTM4-202ENST00000332853 ADAMTS12P58397 1594 aa15.91■□□□□ 0.14
VSTM4-202ENST00000332853 ITSN2Q9NZM3 1697 aa15.9■□□□□ 0.14
VSTM4-202ENST00000332853 TMPOP42166 694 aaKnown RBP15.9■□□□□ 0.14
VSTM4-202ENST00000332853 SYCP2Q9BX26 1530 aa15.9■□□□□ 0.14
VSTM4-202ENST00000332853 CDC45O75419 566 aa15.9■□□□□ 0.14
VSTM4-202ENST00000332853 MIS18AQ9NYP9 233 aa15.9■□□□□ 0.14
VSTM4-202ENST00000332853 KIAA0556O60303 1618 aa15.9■□□□□ 0.14
VSTM4-202ENST00000332853 NEUROD6Q96NK8 337 aa15.89■□□□□ 0.13
VSTM4-202ENST00000332853 MCTP1Q6DN14 999 aa15.89■□□□□ 0.13
VSTM4-202ENST00000332853 ATF7IPQ6VMQ6 1270 aa15.89■□□□□ 0.13
VSTM4-202ENST00000332853 CHMP5Q9NZZ3 219 aa15.89■□□□□ 0.13
VSTM4-202ENST00000332853 SF3A1Q15459 793 aaKnown RBP15.89■□□□□ 0.13
VSTM4-202ENST00000332853 SURF6O75683 361 aaKnown RBP15.89■□□□□ 0.13
VSTM4-202ENST00000332853 MVPQ14764 893 aaKnown RBP15.89■□□□□ 0.13
VSTM4-202ENST00000332853 PLEKHO1Q53GL0 409 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms