RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 TECPR2O15040 1411 aa14.04□□□□□ -0.16
SYN3-201ENST00000332840 C14orf93Q9H972 538 aaKnown RBP14.03□□□□□ -0.16
SYN3-201ENST00000332840 ABCC11Q96J66 1382 aa14.03□□□□□ -0.16
SYN3-201ENST00000332840 ROBO2Q9HCK4 1378 aa14.03□□□□□ -0.16
SYN3-201ENST00000332840 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
SYN3-201ENST00000332840 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
SYN3-201ENST00000332840 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
SYN3-201ENST00000332840 UPF1Q92900 1129 aaKnown RBP eCLIP14.02□□□□□ -0.17
SYN3-201ENST00000332840 SIRT1Q96EB6 747 aa14.01□□□□□ -0.17
SYN3-201ENST00000332840 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
SYN3-201ENST00000332840 LAMC1P11047 1609 aa14.01□□□□□ -0.17
SYN3-201ENST00000332840 YTHDC2Q9H6S0 1430 aaKnown RBP14□□□□□ -0.17
SYN3-201ENST00000332840 NPM3O75607 178 aaKnown RBP14□□□□□ -0.17
SYN3-201ENST00000332840 DCAF11Q8TEB1 546 aa14□□□□□ -0.17
SYN3-201ENST00000332840 AHDC1Q5TGY3 1603 aaPredicted RBP14□□□□□ -0.17
SYN3-201ENST00000332840 MST1RQ04912 1400 aa13.99□□□□□ -0.17
SYN3-201ENST00000332840 STK26Q9P289 416 aa13.99□□□□□ -0.17
SYN3-201ENST00000332840 TMEM132EQ6IEE7 984 aa13.98□□□□□ -0.17
SYN3-201ENST00000332840 BRINP3Q76B58 766 aa13.98□□□□□ -0.17
SYN3-201ENST00000332840 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
SYN3-201ENST00000332840 ASXL1Q8IXJ9 1541 aa13.96□□□□□ -0.17
SYN3-201ENST00000332840 ZNF772Q68DY9 489 aaPredicted RBP13.96□□□□□ -0.17
SYN3-201ENST00000332840 KDM2AQ9Y2K7 1162 aa13.96□□□□□ -0.17
SYN3-201ENST00000332840 NHSL1Q5SYE7 1610 aa13.96□□□□□ -0.17
SYN3-201ENST00000332840 SPATA31A6Q5VVP1 1343 aa13.95□□□□□ -0.18
SYN3-201ENST00000332840 CDC42BPGQ6DT37 1551 aa13.95□□□□□ -0.18
SYN3-201ENST00000332840 C1orf167Q5SNV9 1468 aa13.94□□□□□ -0.18
SYN3-201ENST00000332840 RXRBP28702 533 aa13.94□□□□□ -0.18
SYN3-201ENST00000332840 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
SYN3-201ENST00000332840 SRCAPQ6ZRS2 3230 aa13.93□□□□□ -0.18
SYN3-201ENST00000332840 NALCNQ8IZF0 1738 aa13.93□□□□□ -0.18
SYN3-201ENST00000332840 AFF2P51816 1311 aa13.92□□□□□ -0.18
SYN3-201ENST00000332840 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
SYN3-201ENST00000332840 DDX17Q92841 729 aaKnown RBP13.92□□□□□ -0.18
SYN3-201ENST00000332840 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
SYN3-201ENST00000332840 POGKQ9P215 609 aa13.92□□□□□ -0.18
SYN3-201ENST00000332840 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
SYN3-201ENST00000332840 KNDC1Q76NI1 1749 aa13.92□□□□□ -0.18
SYN3-201ENST00000332840 ADGRB1O14514 1584 aa13.92□□□□□ -0.18
SYN3-201ENST00000332840 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
SYN3-201ENST00000332840 PRAM1Q96QH2 718 aa13.91□□□□□ -0.18
SYN3-201ENST00000332840 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
SYN3-201ENST00000332840 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.19
SYN3-201ENST00000332840 EIF3AQ14152 1382 aaKnown RBP13.89□□□□□ -0.19
SYN3-201ENST00000332840 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
SYN3-201ENST00000332840 ESCO1Q5FWF5 840 aa13.88□□□□□ -0.19
SYN3-201ENST00000332840 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
SYN3-201ENST00000332840 RGS12O14924 1447 aa13.88□□□□□ -0.19
SYN3-201ENST00000332840 CACNB1Q02641 598 aaPredicted RBP13.87□□□□□ -0.19
SYN3-201ENST00000332840 NEUROD1Q13562 356 aa13.87□□□□□ -0.19
SYN3-201ENST00000332840 ORAI2Q96SN7 254 aa13.87□□□□□ -0.19
SYN3-201ENST00000332840 TRAK1Q9UPV9 953 aa13.87□□□□□ -0.19
SYN3-201ENST00000332840 SOS2Q07890 1332 aaPredicted RBP13.86□□□□□ -0.19
SYN3-201ENST00000332840 EP400Q96L91 3159 aa13.85□□□□□ -0.19
SYN3-201ENST00000332840 MARF1Q9Y4F3 1742 aaKnown RBP13.85□□□□□ -0.19
SYN3-201ENST00000332840 ANKARQ7Z5J8 1434 aa13.85□□□□□ -0.19
SYN3-201ENST00000332840 ADAMTS2O95450 1211 aa13.85□□□□□ -0.19
SYN3-201ENST00000332840 L3MBTL2Q969R5 705 aa13.85□□□□□ -0.19
SYN3-201ENST00000332840 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
SYN3-201ENST00000332840 QTRT2Q9H974 415 aaKnown RBP13.84□□□□□ -0.19
SYN3-201ENST00000332840 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
SYN3-201ENST00000332840 ADGRB2O60241 1585 aa13.83□□□□□ -0.19
SYN3-201ENST00000332840 PNPLA6Q8IY17 1366 aa13.82□□□□□ -0.2
SYN3-201ENST00000332840 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
SYN3-201ENST00000332840 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
SYN3-201ENST00000332840 BRWD3Q6RI45 1802 aa13.81□□□□□ -0.2
SYN3-201ENST00000332840 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
SYN3-201ENST00000332840 FOXO3O43524 673 aa13.81□□□□□ -0.2
SYN3-201ENST00000332840 PHF8Q9UPP1 1060 aa13.81□□□□□ -0.2
SYN3-201ENST00000332840 WASLO00401 505 aaPredicted RBP13.8□□□□□ -0.2
SYN3-201ENST00000332840 RBM6P78332 1123 aaKnown RBP13.8□□□□□ -0.2
SYN3-201ENST00000332840 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
SYN3-201ENST00000332840 MINK1Q8N4C8 1332 aaPredicted RBP13.8□□□□□ -0.2
SYN3-201ENST00000332840 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
SYN3-201ENST00000332840 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
SYN3-201ENST00000332840 KCNA4P22459 653 aa13.79□□□□□ -0.2
SYN3-201ENST00000332840 PSME1Q06323 249 aa13.79□□□□□ -0.2
SYN3-201ENST00000332840 PXDNQ92626 1479 aa13.79□□□□□ -0.2
SYN3-201ENST00000332840 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
SYN3-201ENST00000332840 NBPF1Q3BBV0 1214 aa13.78□□□□□ -0.2
SYN3-201ENST00000332840 HIRIP3Q9BW71 556 aaPredicted RBP13.78□□□□□ -0.2
SYN3-201ENST00000332840 ROCK2O75116 1388 aaKnown RBP13.78□□□□□ -0.2
SYN3-201ENST00000332840 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
SYN3-201ENST00000332840 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
SYN3-201ENST00000332840 CENPJQ9HC77 1338 aaPredicted RBP13.77□□□□□ -0.21
SYN3-201ENST00000332840 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
SYN3-201ENST00000332840 SBNO1A3KN83 1393 aa13.75□□□□□ -0.21
SYN3-201ENST00000332840 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
SYN3-201ENST00000332840 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
SYN3-201ENST00000332840 KRT28Q7Z3Y7 464 aa13.75□□□□□ -0.21
SYN3-201ENST00000332840 USP21Q9UK80 565 aa13.75□□□□□ -0.21
SYN3-201ENST00000332840 ARHGEF10O15013 1369 aa13.74□□□□□ -0.21
SYN3-201ENST00000332840 XPCQ01831 940 aaPredicted RBP13.74□□□□□ -0.21
SYN3-201ENST00000332840 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
SYN3-201ENST00000332840 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
SYN3-201ENST00000332840 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
SYN3-201ENST00000332840 COL22A1Q8NFW1 1626 aaPredicted RBP13.72□□□□□ -0.21
SYN3-201ENST00000332840 PRR36Q9H6K5 1346 aa13.72□□□□□ -0.21
SYN3-201ENST00000332840 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
SYN3-201ENST00000332840 NUDT16Q96DE0 195 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms