RNA–Protein interactions for RNA: ENST00000332598.6

TMED9-201, Transcript of transmembrane p24 trafficking protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED9, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-201ENST00000332598 PHLPP1O60346 1717 aa24.53■■□□□ 1.52
TMED9-201ENST00000332598 PRAM1Q96QH2 718 aa24.51■■□□□ 1.51
TMED9-201ENST00000332598 TRAK1Q9UPV9 953 aa24.51■■□□□ 1.51
TMED9-201ENST00000332598 NEUROD1Q13562 356 aa24.51■■□□□ 1.51
TMED9-201ENST00000332598 SAFB2Q14151 953 aaKnown RBP eCLIP24.51■■□□□ 1.51
TMED9-201ENST00000332598 ADGRB1O14514 1584 aa24.51■■□□□ 1.51
TMED9-201ENST00000332598 AHDC1Q5TGY3 1603 aaPredicted RBP24.5■■□□□ 1.51
TMED9-201ENST00000332598 COL16A1Q07092 1604 aaPredicted RBP24.5■■□□□ 1.51
TMED9-201ENST00000332598 NUTM2FA1L443 756 aa24.5■■□□□ 1.51
TMED9-201ENST00000332598 KNDC1Q76NI1 1749 aa24.5■■□□□ 1.51
TMED9-201ENST00000332598 JCADQ9P266 1359 aa24.49■■□□□ 1.51
TMED9-201ENST00000332598 L3MBTL2Q969R5 705 aa24.47■■□□□ 1.51
TMED9-201ENST00000332598 POGKQ9P215 609 aa24.47■■□□□ 1.51
TMED9-201ENST00000332598 ESCO1Q5FWF5 840 aa24.46■■□□□ 1.51
TMED9-201ENST00000332598 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
TMED9-201ENST00000332598 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
TMED9-201ENST00000332598 DLC1Q96QB1 1528 aa24.42■■□□□ 1.5
TMED9-201ENST00000332598 NBPF1Q3BBV0 1214 aa24.42■■□□□ 1.5
TMED9-201ENST00000332598 LRRC59Q96AG4 307 aaKnown RBP24.41■■□□□ 1.5
TMED9-201ENST00000332598 HIRIP3Q9BW71 556 aaPredicted RBP24.39■■□□□ 1.5
TMED9-201ENST00000332598 RGS17Q9UGC6 210 aaPredicted RBP24.39■■□□□ 1.5
TMED9-201ENST00000332598 NHSL1Q5SYE7 1610 aa24.39■■□□□ 1.49
TMED9-201ENST00000332598 FOXO3O43524 673 aa24.38■■□□□ 1.49
TMED9-201ENST00000332598 SOS2Q07890 1332 aaPredicted RBP24.38■■□□□ 1.49
TMED9-201ENST00000332598 SPATA31A6Q5VVP1 1343 aa24.38■■□□□ 1.49
TMED9-201ENST00000332598 MINK1Q8N4C8 1332 aaPredicted RBP24.37■■□□□ 1.49
TMED9-201ENST00000332598 NUTM2BA6NNL0 878 aaPredicted RBP24.35■■□□□ 1.49
TMED9-201ENST00000332598 NUTM2EB1AL46 878 aaPredicted RBP24.35■■□□□ 1.49
TMED9-201ENST00000332598 XPCQ01831 940 aaPredicted RBP24.35■■□□□ 1.49
TMED9-201ENST00000332598 NUTM2AQ8IVF1 878 aaPredicted RBP24.35■■□□□ 1.49
TMED9-201ENST00000332598 NPHP3Q7Z494 1330 aa24.34■■□□□ 1.49
TMED9-201ENST00000332598 LRP6O75581 1613 aa24.33■■□□□ 1.49
TMED9-201ENST00000332598 FMN2Q9NZ56 1722 aa24.32■■□□□ 1.48
TMED9-201ENST00000332598 PNPLA6Q8IY17 1366 aa24.32■■□□□ 1.48
TMED9-201ENST00000332598 SHPRHQ149N8 1683 aa24.31■■□□□ 1.48
TMED9-201ENST00000332598 WASLO00401 505 aaPredicted RBP24.3■■□□□ 1.48
TMED9-201ENST00000332598 PHF8Q9UPP1 1060 aa24.3■■□□□ 1.48
TMED9-201ENST00000332598 KIAA1210Q9ULL0 1709 aa24.29■■□□□ 1.48
TMED9-201ENST00000332598 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
TMED9-201ENST00000332598 PXDNQ92626 1479 aa24.28■■□□□ 1.48
TMED9-201ENST00000332598 ADGRB2O60241 1585 aa24.27■■□□□ 1.48
TMED9-201ENST00000332598 NBPF8Q3BBV2 869 aa24.26■■□□□ 1.47
TMED9-201ENST00000332598 POTEAQ6S8J7 498 aa24.26■■□□□ 1.47
TMED9-201ENST00000332598 PMFBP1Q8TBY8 1022 aa24.26■■□□□ 1.47
TMED9-201ENST00000332598 PRR36Q9H6K5 1346 aa24.25■■□□□ 1.47
TMED9-201ENST00000332598 ARHGEF28Q8N1W1 1705 aaKnown RBP24.25■■□□□ 1.47
TMED9-201ENST00000332598 KRT28Q7Z3Y7 464 aa24.25■■□□□ 1.47
TMED9-201ENST00000332598 ANKARQ7Z5J8 1434 aa24.25■■□□□ 1.47
TMED9-201ENST00000332598 TONSLQ96HA7 1378 aa24.23■■□□□ 1.47
TMED9-201ENST00000332598 USP32Q8NFA0 1604 aa24.21■■□□□ 1.47
TMED9-201ENST00000332598 CDK19Q9BWU1 502 aa24.21■■□□□ 1.47
TMED9-201ENST00000332598 ROCK2O75116 1388 aaKnown RBP24.21■■□□□ 1.47
TMED9-201ENST00000332598 CENPJQ9HC77 1338 aaPredicted RBP24.21■■□□□ 1.47
TMED9-201ENST00000332598 ADAMTS2O95450 1211 aa24.2■■□□□ 1.47
TMED9-201ENST00000332598 RGPD8O14715 1765 aaPredicted RBP24.2■■□□□ 1.47
TMED9-201ENST00000332598 EIF3AQ14152 1382 aaKnown RBP24.2■■□□□ 1.46
TMED9-201ENST00000332598 PSME1Q06323 249 aa24.19■■□□□ 1.46
TMED9-201ENST00000332598 TULP4Q9NRJ4 1543 aa24.19■■□□□ 1.46
TMED9-201ENST00000332598 SPATA31A3Q5VYP0 1347 aa24.19■■□□□ 1.46
TMED9-201ENST00000332598 KIF1AQ12756 1690 aa24.19■■□□□ 1.46
TMED9-201ENST00000332598 NUDT16Q96DE0 195 aaKnown RBP24.19■■□□□ 1.46
TMED9-201ENST00000332598 TRPM1Q7Z4N2 1603 aa24.18■■□□□ 1.46
TMED9-201ENST00000332598 C8orf37Q96NL8 207 aa24.18■■□□□ 1.46
TMED9-201ENST00000332598 ZNF772Q68DY9 489 aaPredicted RBP24.15■■□□□ 1.46
TMED9-201ENST00000332598 AFF2P51816 1311 aa24.15■■□□□ 1.46
TMED9-201ENST00000332598 ATP7BP35670 1465 aa24.13■■□□□ 1.45
TMED9-201ENST00000332598 NGDNQ8NEJ9 315 aaKnown RBP24.13■■□□□ 1.45
TMED9-201ENST00000332598 LMOD2Q6P5Q4 547 aa24.13■■□□□ 1.45
TMED9-201ENST00000332598 NGLY1Q96IV0 654 aa24.13■■□□□ 1.45
TMED9-201ENST00000332598 COL22A1Q8NFW1 1626 aaPredicted RBP24.11■■□□□ 1.45
TMED9-201ENST00000332598 SBNO1A3KN83 1393 aa24.11■■□□□ 1.45
TMED9-201ENST00000332598 GPRASP1Q5JY77 1395 aa24.11■■□□□ 1.45
TMED9-201ENST00000332598 SRPK2P78362 688 aaKnown RBP24.11■■□□□ 1.45
TMED9-201ENST00000332598 CABP2Q9NPB3 220 aa24.11■■□□□ 1.45
TMED9-201ENST00000332598 CCDC61Q9Y6R9 512 aa24.11■■□□□ 1.45
TMED9-201ENST00000332598 TNS3Q68CZ2 1445 aa24.11■■□□□ 1.45
TMED9-201ENST00000332598 PLEKHG5O94827 1062 aa24.1■■□□□ 1.45
TMED9-201ENST00000332598 CARD11Q9BXL7 1154 aa24.1■■□□□ 1.45
TMED9-201ENST00000332598 CABLES1Q8TDN4 633 aa24.09■■□□□ 1.45
TMED9-201ENST00000332598 CCER1Q8TC90 406 aaPredicted RBP24.08■■□□□ 1.45
TMED9-201ENST00000332598 ZEB1P37275 1124 aaPredicted RBP24.06■■□□□ 1.44
TMED9-201ENST00000332598 ACEP12821 1306 aa24.06■■□□□ 1.44
TMED9-201ENST00000332598 CLSPNQ9HAW4 1339 aa24.06■■□□□ 1.44
TMED9-201ENST00000332598 QRICH2Q9H0J4 1663 aa24.05■■□□□ 1.44
TMED9-201ENST00000332598 PLEKHG3A1L390 1219 aa24.05■■□□□ 1.44
TMED9-201ENST00000332598 PAK3O75914 559 aaPredicted RBP24.05■■□□□ 1.44
TMED9-201ENST00000332598 ARHGEF10O15013 1369 aa24.05■■□□□ 1.44
TMED9-201ENST00000332598 RALGAPBQ86X10 1494 aa24.04■■□□□ 1.44
TMED9-201ENST00000332598 FNBP4Q8N3X1 1017 aaPredicted RBP24.04■■□□□ 1.44
TMED9-201ENST00000332598 QTRT2Q9H974 415 aaKnown RBP24.04■■□□□ 1.44
TMED9-201ENST00000332598 RXRBP28702 533 aa24.03■■□□□ 1.44
TMED9-201ENST00000332598 HAP1P54257 671 aaPredicted RBP24.03■■□□□ 1.44
TMED9-201ENST00000332598 EVC2Q86UK5 1308 aa24.03■■□□□ 1.44
TMED9-201ENST00000332598 POLR3AO14802 1390 aaPredicted RBP24.03■■□□□ 1.44
TMED9-201ENST00000332598 USP21Q9UK80 565 aa24.02■■□□□ 1.44
TMED9-201ENST00000332598 PPIP5K1Q6PFW1 1433 aa24.01■■□□□ 1.43
TMED9-201ENST00000332598 CABP1Q9NZU7 370 aa24■■□□□ 1.43
TMED9-201ENST00000332598 TRPM3Q9HCF6 1732 aaPredicted RBP23.99■■□□□ 1.43
TMED9-201ENST00000332598 ITSN1Q15811 1721 aa23.98■■□□□ 1.43
TMED9-201ENST00000332598 TOPAZ1Q8N9V7 1692 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms