RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 SETD1BQ9UPS6 1966 aaKnown RBP9.95□□□□□ -0.82
SMG1-201ENST00000330588 DHX29Q7Z478 1369 aaKnown RBP9.95□□□□□ -0.82
SMG1-201ENST00000330588 DSG2Q14126 1118 aa9.94□□□□□ -0.82
SMG1-201ENST00000330588 PSDA5PKW4 1024 aaPredicted RBP9.93□□□□□ -0.82
SMG1-201ENST00000330588 ZNF644Q9H582 1327 aaPredicted RBP9.93□□□□□ -0.82
SMG1-201ENST00000330588 SHANK2Q9UPX8 1470 aa9.93□□□□□ -0.82
SMG1-201ENST00000330588 EIF2AK4Q9P2K8 1649 aaKnown RBP9.93□□□□□ -0.82
SMG1-201ENST00000330588 TCOF1Q13428 1488 aaKnown RBP9.92□□□□□ -0.82
SMG1-201ENST00000330588 MLECQ14165 292 aa9.92□□□□□ -0.82
SMG1-201ENST00000330588 KANK4Q5T7N3 995 aaPredicted RBP9.92□□□□□ -0.82
SMG1-201ENST00000330588 UHRF1BP1Q6BDS2 1440 aa9.92□□□□□ -0.82
SMG1-201ENST00000330588 CROCC2H7BZ55 1655 aa9.91□□□□□ -0.82
SMG1-201ENST00000330588 RNF17Q9BXT8 1623 aaKnown RBP9.91□□□□□ -0.82
SMG1-201ENST00000330588 ESF1Q9H501 851 aaKnown RBP9.91□□□□□ -0.82
SMG1-201ENST00000330588 RYDENQ9NUL5 291 aaKnown RBP9.91□□□□□ -0.82
SMG1-201ENST00000330588 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
SMG1-201ENST00000330588 PTPN23Q9H3S7 1636 aa9.9□□□□□ -0.83
SMG1-201ENST00000330588 TSPY4P0CV99 314 aa9.89□□□□□ -0.83
SMG1-201ENST00000330588 TSPY10P0CW01 314 aa9.89□□□□□ -0.83
SMG1-201ENST00000330588 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
SMG1-201ENST00000330588 ZNF142P52746 1687 aaPredicted RBP9.89□□□□□ -0.83
SMG1-201ENST00000330588 ZC3H13Q5T200 1668 aaKnown RBP9.89□□□□□ -0.83
SMG1-201ENST00000330588 DNMT1P26358 1616 aaKnown RBP9.89□□□□□ -0.83
SMG1-201ENST00000330588 KDM5DQ9BY66 1539 aa9.89□□□□□ -0.83
SMG1-201ENST00000330588 FGD6Q6ZV73 1430 aa9.89□□□□□ -0.83
SMG1-201ENST00000330588 CLTCQ00610 1675 aaKnown RBP9.88□□□□□ -0.83
SMG1-201ENST00000330588 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
SMG1-201ENST00000330588 ARHGAP33O14559 1287 aa9.88□□□□□ -0.83
SMG1-201ENST00000330588 DUOX2Q9NRD8 1548 aa9.87□□□□□ -0.83
SMG1-201ENST00000330588 PTPRKQ15262 1439 aa9.87□□□□□ -0.83
SMG1-201ENST00000330588 TBC1D12O60347 775 aa9.86□□□□□ -0.83
SMG1-201ENST00000330588 OXER1Q8TDS5 423 aa9.86□□□□□ -0.83
SMG1-201ENST00000330588 ERBINQ96RT1 1412 aa9.86□□□□□ -0.83
SMG1-201ENST00000330588 PZPP20742 1482 aa9.85□□□□□ -0.83
SMG1-201ENST00000330588 DAPK1P53355 1430 aa9.85□□□□□ -0.83
SMG1-201ENST00000330588 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
SMG1-201ENST00000330588 MYO3AQ8NEV4 1616 aa9.85□□□□□ -0.83
SMG1-201ENST00000330588 CEBPAP49715 358 aaPredicted RBP9.84□□□□□ -0.83
SMG1-201ENST00000330588 PTPRTO14522 1441 aa9.84□□□□□ -0.83
SMG1-201ENST00000330588 ABCC5O15440 1437 aa9.84□□□□□ -0.83
SMG1-201ENST00000330588 STRCQ7RTU9 1775 aa9.84□□□□□ -0.83
SMG1-201ENST00000330588 ADGRL2O95490 1459 aa9.84□□□□□ -0.83
SMG1-201ENST00000330588 ADGRD1Q6QNK2 874 aa9.84□□□□□ -0.83
SMG1-201ENST00000330588 PRDM15P57071 1507 aaPredicted RBP9.83□□□□□ -0.84
SMG1-201ENST00000330588 DEPDC5O75140 1603 aa9.83□□□□□ -0.84
SMG1-201ENST00000330588 MROH1Q8NDA8 1641 aa9.83□□□□□ -0.84
SMG1-201ENST00000330588 TK2O00142 265 aa9.83□□□□□ -0.84
SMG1-201ENST00000330588 KIF3BO15066 747 aa9.83□□□□□ -0.84
SMG1-201ENST00000330588 GTPBP6O43824 516 aaPredicted RBP9.83□□□□□ -0.84
SMG1-201ENST00000330588 CEP170BQ9Y4F5 1589 aaPredicted RBP9.82□□□□□ -0.84
SMG1-201ENST00000330588 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
SMG1-201ENST00000330588 NCOA1Q15788 1441 aa9.82□□□□□ -0.84
SMG1-201ENST00000330588 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
SMG1-201ENST00000330588 PPP4R3BQ5MIZ7 849 aa9.82□□□□□ -0.84
SMG1-201ENST00000330588 GGT6Q6P531 493 aa9.82□□□□□ -0.84
SMG1-201ENST00000330588 A2ML1A8K2U0 1454 aa9.82□□□□□ -0.84
SMG1-201ENST00000330588 ABCC3O15438 1527 aa9.81□□□□□ -0.84
SMG1-201ENST00000330588 DMRTA1Q5VZB9 504 aa9.81□□□□□ -0.84
SMG1-201ENST00000330588 ANKRD30AQ9BXX3 1397 aa9.81□□□□□ -0.84
SMG1-201ENST00000330588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMG1-201ENST00000330588 NLRP1Q9C000 1473 aa9.81□□□□□ -0.84
SMG1-201ENST00000330588 ARHGAP31Q2M1Z3 1444 aa9.81□□□□□ -0.84
SMG1-201ENST00000330588 SPATA31D1Q6ZQQ2 1576 aa9.8□□□□□ -0.84
SMG1-201ENST00000330588 KIF15Q9NS87 1388 aa9.8□□□□□ -0.84
SMG1-201ENST00000330588 HRO43593 1189 aa9.8□□□□□ -0.84
SMG1-201ENST00000330588 HSPA2P54652 639 aa9.8□□□□□ -0.84
SMG1-201ENST00000330588 PPP1R15BQ5SWA1 713 aa9.8□□□□□ -0.84
SMG1-201ENST00000330588 PSEN2P49810 448 aa9.8□□□□□ -0.84
SMG1-201ENST00000330588 CAMSAP1Q5T5Y3 1602 aa9.79□□□□□ -0.84
SMG1-201ENST00000330588 LMTK2Q8IWU2 1503 aa9.79□□□□□ -0.84
SMG1-201ENST00000330588 WASHC2CQ9Y4E1 1318 aa9.79□□□□□ -0.84
SMG1-201ENST00000330588 VWDEQ8N2E2 1590 aa9.79□□□□□ -0.84
SMG1-201ENST00000330588 TNRQ92752 1358 aa9.78□□□□□ -0.84
SMG1-201ENST00000330588 PDE4AP27815 886 aa9.78□□□□□ -0.84
SMG1-201ENST00000330588 IQSEC2Q5JU85 1478 aa9.78□□□□□ -0.84
SMG1-201ENST00000330588 ROCK1Q13464 1354 aa9.77□□□□□ -0.85
SMG1-201ENST00000330588 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMG1-201ENST00000330588 ERVK-7P63135 1459 aa9.76□□□□□ -0.85
SMG1-201ENST00000330588 KDM5AP29375 1690 aaKnown RBP9.76□□□□□ -0.85
SMG1-201ENST00000330588 CEP152O94986 1710 aa9.76□□□□□ -0.85
SMG1-201ENST00000330588 FBXO41Q8TF61 875 aa9.75□□□□□ -0.85
SMG1-201ENST00000330588 BBXQ8WY36 941 aaPredicted RBP9.75□□□□□ -0.85
SMG1-201ENST00000330588 ANO8Q9HCE9 1232 aaPredicted RBP9.75□□□□□ -0.85
SMG1-201ENST00000330588 KANK1Q14678 1352 aa9.75□□□□□ -0.85
SMG1-201ENST00000330588 POLR1AO95602 1720 aaPredicted RBP9.75□□□□□ -0.85
SMG1-201ENST00000330588 RPRD2Q5VT52 1461 aaKnown RBP9.74□□□□□ -0.85
SMG1-201ENST00000330588 MFSD10Q14728 455 aa9.74□□□□□ -0.85
SMG1-201ENST00000330588 HCSTQ9UBK5 93 aa9.74□□□□□ -0.85
SMG1-201ENST00000330588 UGGT1Q9NYU2 1555 aa9.74□□□□□ -0.85
SMG1-201ENST00000330588 FOSBP53539 338 aa9.73□□□□□ -0.85
SMG1-201ENST00000330588 ANKRD50Q9ULJ7 1429 aa9.73□□□□□ -0.85
SMG1-201ENST00000330588 MED14O60244 1454 aa9.73□□□□□ -0.85
SMG1-201ENST00000330588 EFCAB6Q5THR3 1501 aa9.73□□□□□ -0.85
SMG1-201ENST00000330588 UNC13BO14795 1591 aa9.73□□□□□ -0.85
SMG1-201ENST00000330588 LTBP4Q8N2S1 1624 aa9.72□□□□□ -0.85
SMG1-201ENST00000330588 KCNK17Q96T54 332 aa9.72□□□□□ -0.85
SMG1-201ENST00000330588 BCL2L12Q9HB09 334 aa9.72□□□□□ -0.85
SMG1-201ENST00000330588 RRP7BPQ9NSQ0 103 aa9.72□□□□□ -0.85
SMG1-201ENST00000330588 RRBP1Q9P2E9 1410 aaKnown RBP9.72□□□□□ -0.85
SMG1-201ENST00000330588 THEMISQ8N1K5 641 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms