RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CDC42BPGQ6DT37 1551 aa40.09■■■■■ 4.01
ATPAF1-201ENST00000329231 ILDR2Q71H61 639 aa40.07■■■■■ 4.01
ATPAF1-201ENST00000329231 ADGRB1O14514 1584 aa40.06■■■■■ 4
ATPAF1-201ENST00000329231 ORAI2Q96SN7 254 aa40.02■■■■■ 4
ATPAF1-201ENST00000329231 DLC1Q96QB1 1528 aa40.01■■■■■ 4
ATPAF1-201ENST00000329231 PRAM1Q96QH2 718 aa40.01■■■■■ 4
ATPAF1-201ENST00000329231 NHSL1Q5SYE7 1610 aa40.01■■■■■ 4
ATPAF1-201ENST00000329231 POGKQ9P215 609 aa39.99■■■■□ 3.99
ATPAF1-201ENST00000329231 SPATA31A6Q5VVP1 1343 aa39.97■■■■□ 3.99
ATPAF1-201ENST00000329231 DDX17Q92841 729 aaKnown RBP39.97■■■■□ 3.99
ATPAF1-201ENST00000329231 TRAK1Q9UPV9 953 aa39.97■■■■□ 3.99
ATPAF1-201ENST00000329231 LRRC59Q96AG4 307 aaKnown RBP39.96■■■■□ 3.99
ATPAF1-201ENST00000329231 ESCO1Q5FWF5 840 aa39.95■■■■□ 3.99
ATPAF1-201ENST00000329231 SAFB2Q14151 953 aaKnown RBP eCLIP39.94■■■■□ 3.98
ATPAF1-201ENST00000329231 SIN3AQ96ST3 1273 aa39.93■■■■□ 3.98
ATPAF1-201ENST00000329231 NUTM2FA1L443 756 aa39.91■■■■□ 3.98
ATPAF1-201ENST00000329231 SHPRHQ149N8 1683 aa39.91■■■■□ 3.98
ATPAF1-201ENST00000329231 NEUROD1Q13562 356 aa39.88■■■■□ 3.97
ATPAF1-201ENST00000329231 L3MBTL2Q969R5 705 aa39.87■■■■□ 3.97
ATPAF1-201ENST00000329231 FMN2Q9NZ56 1722 aa39.87■■■■□ 3.97
ATPAF1-201ENST00000329231 SOS2Q07890 1332 aaPredicted RBP39.87■■■■□ 3.97
ATPAF1-201ENST00000329231 NPHP3Q7Z494 1330 aa39.85■■■■□ 3.97
ATPAF1-201ENST00000329231 KIAA1210Q9ULL0 1709 aa39.83■■■■□ 3.97
ATPAF1-201ENST00000329231 RGS17Q9UGC6 210 aaPredicted RBP39.82■■■■□ 3.97
ATPAF1-201ENST00000329231 LRP6O75581 1613 aa39.8■■■■□ 3.96
ATPAF1-201ENST00000329231 FOXO3O43524 673 aa39.79■■■■□ 3.96
ATPAF1-201ENST00000329231 MEX3CQ5U5Q3 659 aaKnown RBP39.79■■■■□ 3.96
ATPAF1-201ENST00000329231 PNPLA6Q8IY17 1366 aa39.79■■■■□ 3.96
ATPAF1-201ENST00000329231 ADGRB2O60241 1585 aa39.77■■■■□ 3.96
ATPAF1-201ENST00000329231 MINK1Q8N4C8 1332 aaPredicted RBP39.77■■■■□ 3.96
ATPAF1-201ENST00000329231 NUTM2BA6NNL0 878 aaPredicted RBP39.77■■■■□ 3.96
ATPAF1-201ENST00000329231 NUTM2EB1AL46 878 aaPredicted RBP39.77■■■■□ 3.96
ATPAF1-201ENST00000329231 NUTM2AQ8IVF1 878 aaPredicted RBP39.77■■■■□ 3.96
ATPAF1-201ENST00000329231 NBPF1Q3BBV0 1214 aa39.76■■■■□ 3.96
ATPAF1-201ENST00000329231 HIRIP3Q9BW71 556 aaPredicted RBP39.76■■■■□ 3.96
ATPAF1-201ENST00000329231 SOCS7O14512 581 aa39.73■■■■□ 3.95
ATPAF1-201ENST00000329231 ARHGEF28Q8N1W1 1705 aaKnown RBP39.72■■■■□ 3.95
ATPAF1-201ENST00000329231 ANKARQ7Z5J8 1434 aa39.72■■■■□ 3.95
ATPAF1-201ENST00000329231 KIF1AQ12756 1690 aa39.71■■■■□ 3.95
ATPAF1-201ENST00000329231 PHF8Q9UPP1 1060 aa39.71■■■■□ 3.95
ATPAF1-201ENST00000329231 EIF3AQ14152 1382 aaKnown RBP39.71■■■■□ 3.95
ATPAF1-201ENST00000329231 PXDNQ92626 1479 aa39.7■■■■□ 3.95
ATPAF1-201ENST00000329231 WASLO00401 505 aaPredicted RBP39.69■■■■□ 3.94
ATPAF1-201ENST00000329231 XPCQ01831 940 aaPredicted RBP39.69■■■■□ 3.94
ATPAF1-201ENST00000329231 POTEAQ6S8J7 498 aa39.64■■■■□ 3.94
ATPAF1-201ENST00000329231 RGPD8O14715 1765 aaPredicted RBP39.64■■■■□ 3.94
ATPAF1-201ENST00000329231 TULP4Q9NRJ4 1543 aa39.61■■■■□ 3.93
ATPAF1-201ENST00000329231 KRT28Q7Z3Y7 464 aa39.61■■■■□ 3.93
ATPAF1-201ENST00000329231 ZNF772Q68DY9 489 aaPredicted RBP39.6■■■■□ 3.93
ATPAF1-201ENST00000329231 USP32Q8NFA0 1604 aa39.6■■■■□ 3.93
ATPAF1-201ENST00000329231 PSME1Q06323 249 aa39.59■■■■□ 3.93
ATPAF1-201ENST00000329231 TONSLQ96HA7 1378 aa39.58■■■■□ 3.93
ATPAF1-201ENST00000329231 PMFBP1Q8TBY8 1022 aa39.57■■■■□ 3.93
ATPAF1-201ENST00000329231 PRR36Q9H6K5 1346 aa39.57■■■■□ 3.92
ATPAF1-201ENST00000329231 COL22A1Q8NFW1 1626 aaPredicted RBP39.55■■■■□ 3.92
ATPAF1-201ENST00000329231 SPATA31A3Q5VYP0 1347 aa39.55■■■■□ 3.92
ATPAF1-201ENST00000329231 TRPM1Q7Z4N2 1603 aa39.54■■■■□ 3.92
ATPAF1-201ENST00000329231 CENPJQ9HC77 1338 aaPredicted RBP39.54■■■■□ 3.92
ATPAF1-201ENST00000329231 ADAMTS2O95450 1211 aa39.53■■■■□ 3.92
ATPAF1-201ENST00000329231 C8orf37Q96NL8 207 aa39.53■■■■□ 3.92
ATPAF1-201ENST00000329231 ROCK2O75116 1388 aaKnown RBP39.53■■■■□ 3.92
ATPAF1-201ENST00000329231 CDK19Q9BWU1 502 aa39.52■■■■□ 3.92
ATPAF1-201ENST00000329231 AFF2P51816 1311 aa39.5■■■■□ 3.91
ATPAF1-201ENST00000329231 NBPF8Q3BBV2 869 aa39.49■■■■□ 3.91
ATPAF1-201ENST00000329231 NUDT16Q96DE0 195 aaKnown RBP39.49■■■■□ 3.91
ATPAF1-201ENST00000329231 SBNO1A3KN83 1393 aa39.48■■■■□ 3.91
ATPAF1-201ENST00000329231 TNS3Q68CZ2 1445 aa39.47■■■■□ 3.91
ATPAF1-201ENST00000329231 ATP7BP35670 1465 aa39.46■■■■□ 3.91
ATPAF1-201ENST00000329231 NGLY1Q96IV0 654 aa39.46■■■■□ 3.91
ATPAF1-201ENST00000329231 GPRASP1Q5JY77 1395 aa39.46■■■■□ 3.91
ATPAF1-201ENST00000329231 NGDNQ8NEJ9 315 aaKnown RBP39.44■■■■□ 3.9
ATPAF1-201ENST00000329231 PCGF6Q9BYE7 350 aa39.41■■■■□ 3.9
ATPAF1-201ENST00000329231 LMOD2Q6P5Q4 547 aa39.4■■■■□ 3.9
ATPAF1-201ENST00000329231 CCDC61Q9Y6R9 512 aa39.4■■■■□ 3.9
ATPAF1-201ENST00000329231 ARHGEF10O15013 1369 aa39.4■■■■□ 3.9
ATPAF1-201ENST00000329231 ITSN1Q15811 1721 aa39.4■■■■□ 3.9
ATPAF1-201ENST00000329231 SRPK2P78362 688 aaKnown RBP39.37■■■■□ 3.89
ATPAF1-201ENST00000329231 QRICH2Q9H0J4 1663 aa39.37■■■■□ 3.89
ATPAF1-201ENST00000329231 RXRBP28702 533 aa39.34■■■■□ 3.89
ATPAF1-201ENST00000329231 HAP1P54257 671 aaPredicted RBP39.32■■■■□ 3.89
ATPAF1-201ENST00000329231 FNBP4Q8N3X1 1017 aaPredicted RBP39.32■■■■□ 3.89
ATPAF1-201ENST00000329231 CARD11Q9BXL7 1154 aa39.32■■■■□ 3.89
ATPAF1-201ENST00000329231 QTRT2Q9H974 415 aaKnown RBP39.32■■■■□ 3.89
ATPAF1-201ENST00000329231 PLEKHG3A1L390 1219 aa39.31■■■■□ 3.88
ATPAF1-201ENST00000329231 USP21Q9UK80 565 aa39.31■■■■□ 3.88
ATPAF1-201ENST00000329231 RALGAPBQ86X10 1494 aa39.3■■■■□ 3.88
ATPAF1-201ENST00000329231 CABP2Q9NPB3 220 aa39.3■■■■□ 3.88
ATPAF1-201ENST00000329231 TRPM3Q9HCF6 1732 aaPredicted RBP39.3■■■■□ 3.88
ATPAF1-201ENST00000329231 EVC2Q86UK5 1308 aa39.29■■■■□ 3.88
ATPAF1-201ENST00000329231 TOPAZ1Q8N9V7 1692 aa39.29■■■■□ 3.88
ATPAF1-201ENST00000329231 POLR3AO14802 1390 aaPredicted RBP39.28■■■■□ 3.88
ATPAF1-201ENST00000329231 PAK3O75914 559 aaPredicted RBP39.27■■■■□ 3.88
ATPAF1-201ENST00000329231 ACEP12821 1306 aa39.27■■■■□ 3.88
ATPAF1-201ENST00000329231 CABLES1Q8TDN4 633 aa39.27■■■■□ 3.88
ATPAF1-201ENST00000329231 MARF1Q9Y4F3 1742 aaKnown RBP39.26■■■■□ 3.87
ATPAF1-201ENST00000329231 CLSPNQ9HAW4 1339 aa39.25■■■■□ 3.87
ATPAF1-201ENST00000329231 PLEKHG5O94827 1062 aa39.25■■■■□ 3.87
ATPAF1-201ENST00000329231 PPIP5K1Q6PFW1 1433 aa39.23■■■■□ 3.87
ATPAF1-201ENST00000329231 RBM6P78332 1123 aaKnown RBP39.23■■■■□ 3.87
ATPAF1-201ENST00000329231 TRPC5Q9UL62 973 aaPredicted RBP39.22■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms