RNA–Protein interactions for RNA: ENST00000328459.10

TTC7B-201, Transcript of tetratricopeptide repeat domain 7B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC7B, Length 19,458 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7B-201ENST00000328459 CCDC112Q8NEF3 446 aa9.5□□□□□ -0.89
TTC7B-201ENST00000328459 RASSF8Q8NHQ8 419 aa9.5□□□□□ -0.89
TTC7B-201ENST00000328459 DCTN1Q14203 1278 aa9.5□□□□□ -0.89
TTC7B-201ENST00000328459 HSP90AB4PQ58FF6 505 aa9.5□□□□□ -0.89
TTC7B-201ENST00000328459 ERC2O15083 957 aa9.5□□□□□ -0.89
TTC7B-201ENST00000328459 ANO2Q9NQ90 1003 aa9.5□□□□□ -0.89
TTC7B-201ENST00000328459 MAP3K1Q13233 1512 aa9.49□□□□□ -0.89
TTC7B-201ENST00000328459 RDXP35241 583 aaKnown RBP9.49□□□□□ -0.89
TTC7B-201ENST00000328459 GORABQ5T7V8 394 aa9.49□□□□□ -0.89
TTC7B-201ENST00000328459 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
TTC7B-201ENST00000328459 CADPSQ9ULU8 1353 aa9.49□□□□□ -0.89
TTC7B-201ENST00000328459 VPS37CA5D8V6 355 aaPredicted RBP9.49□□□□□ -0.89
TTC7B-201ENST00000328459 RNF214Q8ND24 703 aa9.49□□□□□ -0.89
TTC7B-201ENST00000328459 GNAI1P63096 354 aa9.49□□□□□ -0.89
TTC7B-201ENST00000328459 H0YHG0 523 aa9.49□□□□□ -0.89
TTC7B-201ENST00000328459 KIF2AO00139 706 aaPredicted RBP9.49□□□□□ -0.89
TTC7B-201ENST00000328459 DYNC1I1O14576 645 aa9.48□□□□□ -0.89
TTC7B-201ENST00000328459 RBM10P98175 930 aaKnown RBP9.48□□□□□ -0.89
TTC7B-201ENST00000328459 ANKRD50Q9ULJ7 1429 aa9.48□□□□□ -0.89
TTC7B-201ENST00000328459 K7ELQ4 463 aaPredicted RBP9.48□□□□□ -0.89
TTC7B-201ENST00000328459 GCC1Q96CN9 775 aa9.48□□□□□ -0.89
TTC7B-201ENST00000328459 STK26Q9P289 416 aa9.48□□□□□ -0.89
TTC7B-201ENST00000328459 POLA1P09884 1462 aaPredicted RBP9.48□□□□□ -0.89
TTC7B-201ENST00000328459 LNPKQ9C0E8 428 aa9.48□□□□□ -0.89
TTC7B-201ENST00000328459 PSMA5P28066 241 aa9.48□□□□□ -0.89
TTC7B-201ENST00000328459 KINO60870 393 aaKnown RBP9.47□□□□□ -0.89
TTC7B-201ENST00000328459 FGD5Q6ZNL6 1462 aa9.47□□□□□ -0.89
TTC7B-201ENST00000328459 NPHP1O15259 732 aa9.47□□□□□ -0.89
TTC7B-201ENST00000328459 ITSN2Q9NZM3 1697 aa9.47□□□□□ -0.89
TTC7B-201ENST00000328459 PES1O00541 588 aaKnown RBP9.47□□□□□ -0.89
TTC7B-201ENST00000328459 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
TTC7B-201ENST00000328459 CPLX1O14810 134 aa9.47□□□□□ -0.89
TTC7B-201ENST00000328459 CHMP3Q9Y3E7 222 aa9.47□□□□□ -0.89
TTC7B-201ENST00000328459 FANCD2Q9BXW9 1451 aa9.47□□□□□ -0.89
TTC7B-201ENST00000328459 PDZRN3Q9UPQ7 1066 aa9.47□□□□□ -0.89
TTC7B-201ENST00000328459 WDR33Q9C0J8 1336 aaKnown RBP9.47□□□□□ -0.89
TTC7B-201ENST00000328459 CREBRFQ8IUR6 639 aa9.47□□□□□ -0.89
TTC7B-201ENST00000328459 USP8P40818 1118 aa9.46□□□□□ -0.89
TTC7B-201ENST00000328459 PRPF40AO75400 957 aaKnown RBP9.46□□□□□ -0.9
TTC7B-201ENST00000328459 ZNF428Q96B54 188 aa9.46□□□□□ -0.9
TTC7B-201ENST00000328459 CEP89Q96ST8 783 aa9.46□□□□□ -0.9
TTC7B-201ENST00000328459 NKTRP30414 1462 aaKnown RBP9.46□□□□□ -0.9
TTC7B-201ENST00000328459 TRIM29Q14134 588 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 RIPK4P57078 832 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 GAPVD1Q14C86 1478 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 LMOD2Q6P5Q4 547 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 SYNE3Q6ZMZ3 975 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 NEK4P51957 841 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 PLEKHH1Q9ULM0 1364 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 KIF21AQ7Z4S6 1674 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 AKAP17AQ02040 695 aaKnown RBP9.45□□□□□ -0.9
TTC7B-201ENST00000328459 ERLIN1O75477 346 aa9.45□□□□□ -0.9
TTC7B-201ENST00000328459 EIF3JO75822 258 aaKnown RBP9.44□□□□□ -0.9
TTC7B-201ENST00000328459 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
TTC7B-201ENST00000328459 DEF6Q9H4E7 631 aa9.44□□□□□ -0.9
TTC7B-201ENST00000328459 CLCN1P35523 988 aa9.44□□□□□ -0.9
TTC7B-201ENST00000328459 CCDC191Q8NCU4 936 aa9.44□□□□□ -0.9
TTC7B-201ENST00000328459 AEBP1Q8IUX7 1158 aa9.44□□□□□ -0.9
TTC7B-201ENST00000328459 DIAPH1O60610 1272 aaKnown RBP9.44□□□□□ -0.9
TTC7B-201ENST00000328459 COG3Q96JB2 828 aa9.44□□□□□ -0.9
TTC7B-201ENST00000328459 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
TTC7B-201ENST00000328459 TDRD9Q8NDG6 1382 aaKnown RBP9.44□□□□□ -0.9
TTC7B-201ENST00000328459 SOX12O15370 315 aa9.44□□□□□ -0.9
TTC7B-201ENST00000328459 KIAA1107Q9UPP5 1409 aa9.44□□□□□ -0.9
TTC7B-201ENST00000328459 IFIT2P09913 472 aaKnown RBP9.43□□□□□ -0.9
TTC7B-201ENST00000328459 WDR63Q8IWG1 891 aa9.43□□□□□ -0.9
TTC7B-201ENST00000328459 VGFO15240 615 aaPredicted RBP9.43□□□□□ -0.9
TTC7B-201ENST00000328459 MYO6Q9UM54 1294 aa9.43□□□□□ -0.9
TTC7B-201ENST00000328459 PRIMPOLQ96LW4 560 aa9.43□□□□□ -0.9
TTC7B-201ENST00000328459 HIP1O00291 1037 aa9.43□□□□□ -0.9
TTC7B-201ENST00000328459 DHX29Q7Z478 1369 aaKnown RBP9.43□□□□□ -0.9
TTC7B-201ENST00000328459 OLFM4Q6UX06 510 aa9.43□□□□□ -0.9
TTC7B-201ENST00000328459 CNTROBQ8N137 903 aa9.43□□□□□ -0.9
TTC7B-201ENST00000328459 HNRNPMP52272 730 aaKnown RBP eCLIP9.43□□□□□ -0.96e-8■■■■■ 34
TTC7B-201ENST00000328459 CLSTN1O94985 981 aa9.43□□□□□ -0.9
TTC7B-201ENST00000328459 MVPQ14764 893 aaKnown RBP9.43□□□□□ -0.9
TTC7B-201ENST00000328459 CALCOCO1Q9P1Z2 691 aa9.43□□□□□ -0.9
TTC7B-201ENST00000328459 CC2D2AQ9P2K1 1620 aa9.42□□□□□ -0.9
TTC7B-201ENST00000328459 CFTRP13569 1480 aa9.42□□□□□ -0.9
TTC7B-201ENST00000328459 ZMYND15Q9H091 742 aa9.42□□□□□ -0.9
TTC7B-201ENST00000328459 NEXNQ0ZGT2 675 aa9.42□□□□□ -0.9
TTC7B-201ENST00000328459 ZNF396Q96N95 335 aaPredicted RBP9.42□□□□□ -0.9
TTC7B-201ENST00000328459 C9orf78Q9NZ63 289 aaPredicted RBP9.42□□□□□ -0.9
TTC7B-201ENST00000328459 CCDC47Q96A33 483 aaKnown RBP9.42□□□□□ -0.9
TTC7B-201ENST00000328459 KIF3BO15066 747 aa9.42□□□□□ -0.9
TTC7B-201ENST00000328459 PLEKHG5O94827 1062 aa9.42□□□□□ -0.9
TTC7B-201ENST00000328459 PPP2R1AP30153 589 aa9.42□□□□□ -0.9
TTC7B-201ENST00000328459 KIAA0754O94854 1291 aa9.42□□□□□ -0.9
TTC7B-201ENST00000328459 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
TTC7B-201ENST00000328459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.42□□□□□ -0.9
TTC7B-201ENST00000328459 IGF1RP08069 1367 aa9.41□□□□□ -0.9
TTC7B-201ENST00000328459 DHX16O60231 1041 aaKnown RBP9.41□□□□□ -0.9
TTC7B-201ENST00000328459 PRXQ9BXM0 1461 aa9.41□□□□□ -0.9
TTC7B-201ENST00000328459 CGNQ9P2M7 1197 aaKnown RBP9.41□□□□□ -0.9
TTC7B-201ENST00000328459 SAFBQ15424 915 aaKnown RBP eCLIP9.41□□□□□ -0.9
TTC7B-201ENST00000328459 HMGXB3Q12766 1538 aa9.41□□□□□ -0.9
TTC7B-201ENST00000328459 RRP12Q5JTH9 1297 aaKnown RBP9.41□□□□□ -0.9
TTC7B-201ENST00000328459 TCP11L2Q8N4U5 519 aa9.41□□□□□ -0.9
TTC7B-201ENST00000328459 PIP4K2AP48426 406 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms