RNA–Protein interactions for RNA: ENST00000321374.9

CCDC33-202, Transcript of coiled-coil domain containing 33, humanhuman

TSL 2

Gene CCDC33, Length 1,450 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-202ENST00000321374 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
CCDC33-202ENST00000321374 ROBO2Q9HCK4 1378 aa17.01■□□□□ 0.31
CCDC33-202ENST00000321374 COL22A1Q8NFW1 1626 aaPredicted RBP17■□□□□ 0.31
CCDC33-202ENST00000321374 ORAI2Q96SN7 254 aa16.99■□□□□ 0.31
CCDC33-202ENST00000321374 USP21Q9UK80 565 aa16.99■□□□□ 0.31
CCDC33-202ENST00000321374 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
CCDC33-202ENST00000321374 TRPC5Q9UL62 973 aaPredicted RBP16.98■□□□□ 0.31
CCDC33-202ENST00000321374 PPLO60437 1756 aa16.97■□□□□ 0.31
CCDC33-202ENST00000321374 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
CCDC33-202ENST00000321374 NAIPQ13075 1403 aa16.96■□□□□ 0.31
CCDC33-202ENST00000321374 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.31
CCDC33-202ENST00000321374 ATRNO75882 1429 aa16.95■□□□□ 0.3
CCDC33-202ENST00000321374 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
CCDC33-202ENST00000321374 FNBP4Q8N3X1 1017 aaPredicted RBP16.95■□□□□ 0.3
CCDC33-202ENST00000321374 MYOM2P54296 1465 aa16.95■□□□□ 0.3
CCDC33-202ENST00000321374 RPGRIP1LQ68CZ1 1315 aa16.94■□□□□ 0.3
CCDC33-202ENST00000321374 NPHP3Q7Z494 1330 aa16.94■□□□□ 0.3
CCDC33-202ENST00000321374 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
CCDC33-202ENST00000321374 PXDNQ92626 1479 aa16.92■□□□□ 0.3
CCDC33-202ENST00000321374 FOXD1Q16676 465 aa16.92■□□□□ 0.3
CCDC33-202ENST00000321374 ESCO1Q5FWF5 840 aa16.91■□□□□ 0.3
CCDC33-202ENST00000321374 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.3
CCDC33-202ENST00000321374 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.89■□□□□ 0.29
CCDC33-202ENST00000321374 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
CCDC33-202ENST00000321374 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
CCDC33-202ENST00000321374 FOXO3O43524 673 aa16.86■□□□□ 0.29
CCDC33-202ENST00000321374 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
CCDC33-202ENST00000321374 LRPPRCP42704 1394 aaKnown RBP16.86■□□□□ 0.29
CCDC33-202ENST00000321374 XPCQ01831 940 aaPredicted RBP16.86■□□□□ 0.29
CCDC33-202ENST00000321374 CCDC125Q86Z20 511 aa16.86■□□□□ 0.29
CCDC33-202ENST00000321374 KNDC1Q76NI1 1749 aa16.85■□□□□ 0.29
CCDC33-202ENST00000321374 TECPR2O15040 1411 aa16.85■□□□□ 0.29
CCDC33-202ENST00000321374 DIEXFQ68CQ4 756 aaKnown RBP16.85■□□□□ 0.29
CCDC33-202ENST00000321374 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
CCDC33-202ENST00000321374 KIF1AQ12756 1690 aa16.84■□□□□ 0.29
CCDC33-202ENST00000321374 FMN2Q9NZ56 1722 aa16.84■□□□□ 0.29
CCDC33-202ENST00000321374 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
CCDC33-202ENST00000321374 GLI3P10071 1580 aa16.82■□□□□ 0.28
CCDC33-202ENST00000321374 CCDC144AA2RUR9 1427 aa16.82■□□□□ 0.28
CCDC33-202ENST00000321374 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
CCDC33-202ENST00000321374 USP32Q8NFA0 1604 aa16.82■□□□□ 0.28
CCDC33-202ENST00000321374 ADGRF5Q8IZF2 1346 aa16.82■□□□□ 0.28
CCDC33-202ENST00000321374 STK26Q9P289 416 aa16.81■□□□□ 0.28
CCDC33-202ENST00000321374 SLIT2O94813 1529 aa16.81■□□□□ 0.28
CCDC33-202ENST00000321374 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
CCDC33-202ENST00000321374 WAPLQ7Z5K2 1190 aa16.8■□□□□ 0.28
CCDC33-202ENST00000321374 UNC5CLQ8IV45 518 aa16.8■□□□□ 0.28
CCDC33-202ENST00000321374 BRWD3Q6RI45 1802 aa16.79■□□□□ 0.28
CCDC33-202ENST00000321374 ABCC11Q96J66 1382 aa16.79■□□□□ 0.28
CCDC33-202ENST00000321374 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
CCDC33-202ENST00000321374 BLMP54132 1417 aaPredicted RBP16.79■□□□□ 0.28
CCDC33-202ENST00000321374 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
CCDC33-202ENST00000321374 PLEKHH1Q9ULM0 1364 aa16.78■□□□□ 0.28
CCDC33-202ENST00000321374 PIK3C2GO75747 1445 aa16.78■□□□□ 0.28
CCDC33-202ENST00000321374 SPATA31E1Q6ZUB1 1445 aa16.78■□□□□ 0.28
CCDC33-202ENST00000321374 RGL3Q3MIN7 710 aa16.77■□□□□ 0.28
CCDC33-202ENST00000321374 PLCH1Q4KWH8 1693 aa16.77■□□□□ 0.27
CCDC33-202ENST00000321374 RGPD8O14715 1765 aaPredicted RBP16.76■□□□□ 0.27
CCDC33-202ENST00000321374 NEUROD1Q13562 356 aa16.75■□□□□ 0.27
CCDC33-202ENST00000321374 TNS3Q68CZ2 1445 aa16.75■□□□□ 0.27
CCDC33-202ENST00000321374 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
CCDC33-202ENST00000321374 SIN3AQ96ST3 1273 aa16.75■□□□□ 0.27
CCDC33-202ENST00000321374 YTHDC2Q9H6S0 1430 aaKnown RBP16.75■□□□□ 0.27
CCDC33-202ENST00000321374 NWD2Q9ULI1 1742 aa16.75■□□□□ 0.27
CCDC33-202ENST00000321374 ABCA3Q99758 1704 aa16.75■□□□□ 0.27
CCDC33-202ENST00000321374 HAP1P54257 671 aaPredicted RBP16.73■□□□□ 0.27
CCDC33-202ENST00000321374 KRT28Q7Z3Y7 464 aa16.73■□□□□ 0.27
CCDC33-202ENST00000321374 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
CCDC33-202ENST00000321374 SF3B2Q13435 895 aaKnown RBP16.72■□□□□ 0.27
CCDC33-202ENST00000321374 DEFB132Q7Z7B7 95 aa16.71■□□□□ 0.27
CCDC33-202ENST00000321374 SEPT12Q8IYM1 358 aa16.71■□□□□ 0.27
CCDC33-202ENST00000321374 NRXN1Q9ULB1 1477 aa16.71■□□□□ 0.27
CCDC33-202ENST00000321374 PSME1Q06323 249 aa16.7■□□□□ 0.26
CCDC33-202ENST00000321374 VPS72Q15906 364 aa16.7■□□□□ 0.26
CCDC33-202ENST00000321374 PHF8Q9UPP1 1060 aa16.7■□□□□ 0.26
CCDC33-202ENST00000321374 CABLES1Q8TDN4 633 aa16.69■□□□□ 0.26
CCDC33-202ENST00000321374 SIRT1Q96EB6 747 aa16.69■□□□□ 0.26
CCDC33-202ENST00000321374 LRP5O75197 1615 aa16.69■□□□□ 0.26
CCDC33-202ENST00000321374 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
CCDC33-202ENST00000321374 ARHGEF10O15013 1369 aa16.69■□□□□ 0.26
CCDC33-202ENST00000321374 CCDC9Q9Y3X0 531 aaKnown RBP16.68■□□□□ 0.26
CCDC33-202ENST00000321374 MPHOSPH9Q99550 1183 aa16.67■□□□□ 0.26
CCDC33-202ENST00000321374 ONECUT3O60422 494 aaPredicted RBP16.67■□□□□ 0.26
CCDC33-202ENST00000321374 PLEKHG5O94827 1062 aa16.67■□□□□ 0.26
CCDC33-202ENST00000321374 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
CCDC33-202ENST00000321374 NRAPQ86VF7 1730 aa16.66■□□□□ 0.26
CCDC33-202ENST00000321374 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
CCDC33-202ENST00000321374 C14orf93Q9H972 538 aaKnown RBP16.66■□□□□ 0.26
CCDC33-202ENST00000321374 ADGRB2O60241 1585 aa16.65■□□□□ 0.26
CCDC33-202ENST00000321374 ANKARQ7Z5J8 1434 aa16.64■□□□□ 0.25
CCDC33-202ENST00000321374 A0A0G2JS52 829 aa16.64■□□□□ 0.25
CCDC33-202ENST00000321374 MYT1Q01538 1121 aa16.64■□□□□ 0.25
CCDC33-202ENST00000321374 PRAM1Q96QH2 718 aa16.64■□□□□ 0.25
CCDC33-202ENST00000321374 TRPM3Q9HCF6 1732 aaPredicted RBP16.64■□□□□ 0.25
CCDC33-202ENST00000321374 DLC1Q96QB1 1528 aa16.64■□□□□ 0.25
CCDC33-202ENST00000321374 SAFB2Q14151 953 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCDC33-202ENST00000321374 CFAP70Q5T0N1 1121 aa16.62■□□□□ 0.25
CCDC33-202ENST00000321374 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
CCDC33-202ENST00000321374 ALS2Q96Q42 1657 aa16.61■□□□□ 0.25
CCDC33-202ENST00000321374 FAM83GA6ND36 823 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms