RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
CLIP4-201ENST00000320081 RNF214Q8ND24 703 aa20.3■□□□□ 0.84
CLIP4-201ENST00000320081 TOMM22Q9NS69 142 aa20.3■□□□□ 0.84
CLIP4-201ENST00000320081 MCTP1Q6DN14 999 aa20.3■□□□□ 0.84
CLIP4-201ENST00000320081 PSME1Q06323 249 aa20.29■□□□□ 0.84
CLIP4-201ENST00000320081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLIP4-201ENST00000320081 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
CLIP4-201ENST00000320081 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.84
CLIP4-201ENST00000320081 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.83
CLIP4-201ENST00000320081 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.83
CLIP4-201ENST00000320081 KIAA2012Q0VF49 1180 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 PDE3AQ14432 1141 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 CFAP44Q96MT7 982 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 DIAPH3Q9NSV4 1193 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
CLIP4-201ENST00000320081 PTPN23Q9H3S7 1636 aa20.25■□□□□ 0.83
CLIP4-201ENST00000320081 SLC4A2P04920 1241 aa20.25■□□□□ 0.83
CLIP4-201ENST00000320081 ATF7IPQ6VMQ6 1270 aa20.24■□□□□ 0.83
CLIP4-201ENST00000320081 TMEM57Q8N5G2 664 aa20.24■□□□□ 0.83
CLIP4-201ENST00000320081 FBXW7Q969H0 707 aa20.24■□□□□ 0.83
CLIP4-201ENST00000320081 FBXO31Q5XUX0 539 aaPredicted RBP20.24■□□□□ 0.83
CLIP4-201ENST00000320081 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
CLIP4-201ENST00000320081 XPCQ01831 940 aaPredicted RBP20.24■□□□□ 0.83
CLIP4-201ENST00000320081 VPS37CA5D8V6 355 aaPredicted RBP20.23■□□□□ 0.83
CLIP4-201ENST00000320081 CAMSAP2Q08AD1 1489 aa20.23■□□□□ 0.83
CLIP4-201ENST00000320081 KIAA0586Q9BVV6 1533 aa20.23■□□□□ 0.83
CLIP4-201ENST00000320081 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
CLIP4-201ENST00000320081 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
CLIP4-201ENST00000320081 CHAF1AQ13111 956 aaPredicted RBP20.23■□□□□ 0.83
CLIP4-201ENST00000320081 MAP4K4O95819 1239 aaPredicted RBP20.22■□□□□ 0.83
CLIP4-201ENST00000320081 DUSP27Q5VZP5 1158 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 CREBRFQ8IUR6 639 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 REC8O95072 547 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 ABTB2Q8N961 1025 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 SYTL4Q96C24 671 aaPredicted RBP20.22■□□□□ 0.83
CLIP4-201ENST00000320081 TRAK2O60296 914 aa20.21■□□□□ 0.83
CLIP4-201ENST00000320081 SURF6O75683 361 aaKnown RBP20.21■□□□□ 0.83
CLIP4-201ENST00000320081 TNNQ9UQP3 1299 aa20.21■□□□□ 0.83
CLIP4-201ENST00000320081 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
CLIP4-201ENST00000320081 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
CLIP4-201ENST00000320081 NEK4P51957 841 aa20.21■□□□□ 0.83
CLIP4-201ENST00000320081 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
CLIP4-201ENST00000320081 NLRP2Q9NX02 1062 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 HECW1Q76N89 1606 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 KDM4AO75164 1064 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 RPRD2Q5VT52 1461 aaKnown RBP20.2■□□□□ 0.82
CLIP4-201ENST00000320081 PLEKHH2Q8IVE3 1493 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
CLIP4-201ENST00000320081 MCM10Q7L590 875 aa20.19■□□□□ 0.82
CLIP4-201ENST00000320081 IFIT2P09913 472 aaKnown RBP20.19■□□□□ 0.82
CLIP4-201ENST00000320081 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
CLIP4-201ENST00000320081 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
CLIP4-201ENST00000320081 IGHDP01880 384 aa20.19■□□□□ 0.82
CLIP4-201ENST00000320081 CDK11BP21127 795 aaKnown RBP20.19■□□□□ 0.82
CLIP4-201ENST00000320081 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
CLIP4-201ENST00000320081 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
CLIP4-201ENST00000320081 RARSP54136 660 aaKnown RBP20.18■□□□□ 0.82
CLIP4-201ENST00000320081 IQGAP2Q13576 1575 aa20.18■□□□□ 0.82
CLIP4-201ENST00000320081 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
CLIP4-201ENST00000320081 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
CLIP4-201ENST00000320081 CAVIN1Q6NZI2 390 aaKnown RBP20.17■□□□□ 0.82
CLIP4-201ENST00000320081 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
CLIP4-201ENST00000320081 UBTFL1P0CB47 393 aaPredicted RBP20.16■□□□□ 0.82
CLIP4-201ENST00000320081 IDI1Q13907 227 aa20.16■□□□□ 0.82
CLIP4-201ENST00000320081 NME9Q86XW9 330 aa20.16■□□□□ 0.82
CLIP4-201ENST00000320081 CDC45O75419 566 aa20.15■□□□□ 0.82
CLIP4-201ENST00000320081 SMARCA5O60264 1052 aaPredicted RBP20.15■□□□□ 0.82
CLIP4-201ENST00000320081 EXOC6BQ9Y2D4 811 aa20.15■□□□□ 0.82
CLIP4-201ENST00000320081 SF3A1Q15459 793 aaKnown RBP20.14■□□□□ 0.82
CLIP4-201ENST00000320081 H3BQV1 296 aa20.14■□□□□ 0.81
CLIP4-201ENST00000320081 IFFO2Q5TF58 517 aa20.14■□□□□ 0.81
CLIP4-201ENST00000320081 NEUROD6Q96NK8 337 aa20.14■□□□□ 0.81
CLIP4-201ENST00000320081 TTC5Q8N0Z6 440 aa20.13■□□□□ 0.81
CLIP4-201ENST00000320081 ESCO1Q5FWF5 840 aa20.13■□□□□ 0.81
CLIP4-201ENST00000320081 NEXNQ0ZGT2 675 aa20.13■□□□□ 0.81
CLIP4-201ENST00000320081 PRPF40AO75400 957 aaKnown RBP20.13■□□□□ 0.81
CLIP4-201ENST00000320081 FAM83GA6ND36 823 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 FAM184AQ8NB25 1140 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 SIL1Q9H173 461 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 F6X3S4 739 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 DDX54Q8TDD1 881 aaKnown RBP20.12■□□□□ 0.81
CLIP4-201ENST00000320081 GOLGA6L6A8MZA4 724 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 NRDCO43847 1150 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 GTF2E1P29083 439 aaPredicted RBP20.12■□□□□ 0.81
CLIP4-201ENST00000320081 FAM177BA6PVY3 158 aa20.11■□□□□ 0.81
CLIP4-201ENST00000320081 WDR63Q8IWG1 891 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 G3BP1Q13283 466 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLIP4-201ENST00000320081 RIC3Q7Z5B4 369 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 HDGFL1Q5TGJ6 251 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 FAM13BQ9NYF5 915 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 ZKSCAN1P17029 563 aaPredicted RBP20.09■□□□□ 0.81
CLIP4-201ENST00000320081 SPINK5Q9NQ38 1064 aaPredicted RBP20.09■□□□□ 0.81
CLIP4-201ENST00000320081 USHBP1Q8N6Y0 703 aa20.09■□□□□ 0.81
CLIP4-201ENST00000320081 APPP05067 770 aa20.08■□□□□ 0.81
CLIP4-201ENST00000320081 PTMSP20962 102 aa20.08■□□□□ 0.81
CLIP4-201ENST00000320081 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms