RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
CLIP4-201ENST00000320081 RNF214Q8ND24 703 aa20.3■□□□□ 0.84
CLIP4-201ENST00000320081 TOMM22Q9NS69 142 aa20.3■□□□□ 0.84
CLIP4-201ENST00000320081 MCTP1Q6DN14 999 aa20.3■□□□□ 0.84
CLIP4-201ENST00000320081 PSME1Q06323 249 aa20.29■□□□□ 0.84
CLIP4-201ENST00000320081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLIP4-201ENST00000320081 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
CLIP4-201ENST00000320081 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.84
CLIP4-201ENST00000320081 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.83
CLIP4-201ENST00000320081 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.83
CLIP4-201ENST00000320081 KIAA2012Q0VF49 1180 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 PDE3AQ14432 1141 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 CFAP44Q96MT7 982 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 DIAPH3Q9NSV4 1193 aa20.26■□□□□ 0.83
CLIP4-201ENST00000320081 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
CLIP4-201ENST00000320081 PTPN23Q9H3S7 1636 aa20.25■□□□□ 0.83
CLIP4-201ENST00000320081 SLC4A2P04920 1241 aa20.25■□□□□ 0.83
CLIP4-201ENST00000320081 ATF7IPQ6VMQ6 1270 aa20.24■□□□□ 0.83
CLIP4-201ENST00000320081 TMEM57Q8N5G2 664 aa20.24■□□□□ 0.83
CLIP4-201ENST00000320081 FBXW7Q969H0 707 aa20.24■□□□□ 0.83
CLIP4-201ENST00000320081 FBXO31Q5XUX0 539 aaPredicted RBP20.24■□□□□ 0.83
CLIP4-201ENST00000320081 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
CLIP4-201ENST00000320081 XPCQ01831 940 aaPredicted RBP20.24■□□□□ 0.83
CLIP4-201ENST00000320081 VPS37CA5D8V6 355 aaPredicted RBP20.23■□□□□ 0.83
CLIP4-201ENST00000320081 CAMSAP2Q08AD1 1489 aa20.23■□□□□ 0.83
CLIP4-201ENST00000320081 KIAA0586Q9BVV6 1533 aa20.23■□□□□ 0.83
CLIP4-201ENST00000320081 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
CLIP4-201ENST00000320081 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
CLIP4-201ENST00000320081 CHAF1AQ13111 956 aaPredicted RBP20.23■□□□□ 0.83
CLIP4-201ENST00000320081 MAP4K4O95819 1239 aaPredicted RBP20.22■□□□□ 0.83
CLIP4-201ENST00000320081 DUSP27Q5VZP5 1158 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 CREBRFQ8IUR6 639 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 REC8O95072 547 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 ABTB2Q8N961 1025 aa20.22■□□□□ 0.83
CLIP4-201ENST00000320081 SYTL4Q96C24 671 aaPredicted RBP20.22■□□□□ 0.83
CLIP4-201ENST00000320081 TRAK2O60296 914 aa20.21■□□□□ 0.83
CLIP4-201ENST00000320081 SURF6O75683 361 aaKnown RBP20.21■□□□□ 0.83
CLIP4-201ENST00000320081 TNNQ9UQP3 1299 aa20.21■□□□□ 0.83
CLIP4-201ENST00000320081 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
CLIP4-201ENST00000320081 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
CLIP4-201ENST00000320081 NEK4P51957 841 aa20.21■□□□□ 0.83
CLIP4-201ENST00000320081 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
CLIP4-201ENST00000320081 NLRP2Q9NX02 1062 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 HECW1Q76N89 1606 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 KDM4AO75164 1064 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 RPRD2Q5VT52 1461 aaKnown RBP20.2■□□□□ 0.82
CLIP4-201ENST00000320081 PLEKHH2Q8IVE3 1493 aa20.2■□□□□ 0.82
CLIP4-201ENST00000320081 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
CLIP4-201ENST00000320081 MCM10Q7L590 875 aa20.19■□□□□ 0.82
CLIP4-201ENST00000320081 IFIT2P09913 472 aaKnown RBP20.19■□□□□ 0.82
CLIP4-201ENST00000320081 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
CLIP4-201ENST00000320081 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
CLIP4-201ENST00000320081 IGHDP01880 384 aa20.19■□□□□ 0.82
CLIP4-201ENST00000320081 CDK11BP21127 795 aaKnown RBP20.19■□□□□ 0.82
CLIP4-201ENST00000320081 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
CLIP4-201ENST00000320081 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
CLIP4-201ENST00000320081 RARSP54136 660 aaKnown RBP20.18■□□□□ 0.82
CLIP4-201ENST00000320081 IQGAP2Q13576 1575 aa20.18■□□□□ 0.82
CLIP4-201ENST00000320081 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
CLIP4-201ENST00000320081 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
CLIP4-201ENST00000320081 CAVIN1Q6NZI2 390 aaKnown RBP20.17■□□□□ 0.82
CLIP4-201ENST00000320081 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
CLIP4-201ENST00000320081 UBTFL1P0CB47 393 aaPredicted RBP20.16■□□□□ 0.82
CLIP4-201ENST00000320081 IDI1Q13907 227 aa20.16■□□□□ 0.82
CLIP4-201ENST00000320081 NME9Q86XW9 330 aa20.16■□□□□ 0.82
CLIP4-201ENST00000320081 CDC45O75419 566 aa20.15■□□□□ 0.82
CLIP4-201ENST00000320081 SMARCA5O60264 1052 aaPredicted RBP20.15■□□□□ 0.82
CLIP4-201ENST00000320081 EXOC6BQ9Y2D4 811 aa20.15■□□□□ 0.82
CLIP4-201ENST00000320081 SF3A1Q15459 793 aaKnown RBP20.14■□□□□ 0.82
CLIP4-201ENST00000320081 H3BQV1 296 aa20.14■□□□□ 0.81
CLIP4-201ENST00000320081 IFFO2Q5TF58 517 aa20.14■□□□□ 0.81
CLIP4-201ENST00000320081 NEUROD6Q96NK8 337 aa20.14■□□□□ 0.81
CLIP4-201ENST00000320081 TTC5Q8N0Z6 440 aa20.13■□□□□ 0.81
CLIP4-201ENST00000320081 ESCO1Q5FWF5 840 aa20.13■□□□□ 0.81
CLIP4-201ENST00000320081 NEXNQ0ZGT2 675 aa20.13■□□□□ 0.81
CLIP4-201ENST00000320081 PRPF40AO75400 957 aaKnown RBP20.13■□□□□ 0.81
CLIP4-201ENST00000320081 FAM83GA6ND36 823 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 FAM184AQ8NB25 1140 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 SIL1Q9H173 461 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 F6X3S4 739 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 DDX54Q8TDD1 881 aaKnown RBP20.12■□□□□ 0.81
CLIP4-201ENST00000320081 GOLGA6L6A8MZA4 724 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 NRDCO43847 1150 aa20.12■□□□□ 0.81
CLIP4-201ENST00000320081 GTF2E1P29083 439 aaPredicted RBP20.12■□□□□ 0.81
CLIP4-201ENST00000320081 FAM177BA6PVY3 158 aa20.11■□□□□ 0.81
CLIP4-201ENST00000320081 WDR63Q8IWG1 891 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 G3BP1Q13283 466 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLIP4-201ENST00000320081 RIC3Q7Z5B4 369 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 HDGFL1Q5TGJ6 251 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 FAM13BQ9NYF5 915 aa20.1■□□□□ 0.81
CLIP4-201ENST00000320081 ZKSCAN1P17029 563 aaPredicted RBP20.09■□□□□ 0.81
CLIP4-201ENST00000320081 SPINK5Q9NQ38 1064 aaPredicted RBP20.09■□□□□ 0.81
CLIP4-201ENST00000320081 USHBP1Q8N6Y0 703 aa20.09■□□□□ 0.81
CLIP4-201ENST00000320081 APPP05067 770 aa20.08■□□□□ 0.81
CLIP4-201ENST00000320081 PTMSP20962 102 aa20.08■□□□□ 0.81
CLIP4-201ENST00000320081 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms