RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SAFB2Q14151 953 aaKnown RBP eCLIP23.86■■□□□ 1.41
LRRC42-201ENST00000319223 CCER1Q8TC90 406 aaPredicted RBP23.86■■□□□ 1.41
LRRC42-201ENST00000319223 DLC1Q96QB1 1528 aa23.85■■□□□ 1.41
LRRC42-201ENST00000319223 MST1RQ04912 1400 aa23.84■■□□□ 1.41
LRRC42-201ENST00000319223 CLSPNQ9HAW4 1339 aa23.84■■□□□ 1.41
LRRC42-201ENST00000319223 ROBO1Q9Y6N7 1651 aa23.83■■□□□ 1.41
LRRC42-201ENST00000319223 TRPM1Q7Z4N2 1603 aa23.82■■□□□ 1.4
LRRC42-201ENST00000319223 POGKQ9P215 609 aa23.82■■□□□ 1.4
LRRC42-201ENST00000319223 ARHGEF28Q8N1W1 1705 aaKnown RBP23.79■■□□□ 1.4
LRRC42-201ENST00000319223 CDC42BPGQ6DT37 1551 aa23.78■■□□□ 1.4
LRRC42-201ENST00000319223 BRINP3Q76B58 766 aa23.78■■□□□ 1.4
LRRC42-201ENST00000319223 C1orf167Q5SNV9 1468 aa23.77■■□□□ 1.4
LRRC42-201ENST00000319223 NUTM2FA1L443 756 aa23.76■■□□□ 1.39
LRRC42-201ENST00000319223 HIRIP3Q9BW71 556 aaPredicted RBP23.76■■□□□ 1.39
LRRC42-201ENST00000319223 MINK1Q8N4C8 1332 aaPredicted RBP23.76■■□□□ 1.39
LRRC42-201ENST00000319223 ROCK2O75116 1388 aaKnown RBP23.76■■□□□ 1.39
LRRC42-201ENST00000319223 ORAI2Q96SN7 254 aa23.75■■□□□ 1.39
LRRC42-201ENST00000319223 DDX17Q92841 729 aaKnown RBP23.71■■□□□ 1.39
LRRC42-201ENST00000319223 FMN2Q9NZ56 1722 aa23.7■■□□□ 1.39
LRRC42-201ENST00000319223 GPRASP1Q5JY77 1395 aa23.7■■□□□ 1.38
LRRC42-201ENST00000319223 RALGAPBQ86X10 1494 aa23.7■■□□□ 1.38
LRRC42-201ENST00000319223 TIMELESSQ9UNS1 1208 aa23.69■■□□□ 1.38
LRRC42-201ENST00000319223 ADGRB2O60241 1585 aa23.69■■□□□ 1.38
LRRC42-201ENST00000319223 ESCO1Q5FWF5 840 aa23.67■■□□□ 1.38
LRRC42-201ENST00000319223 PHLPP1O60346 1717 aa23.67■■□□□ 1.38
LRRC42-201ENST00000319223 CARD11Q9BXL7 1154 aa23.67■■□□□ 1.38
LRRC42-201ENST00000319223 CENPJQ9HC77 1338 aaPredicted RBP23.66■■□□□ 1.38
LRRC42-201ENST00000319223 WASLO00401 505 aaPredicted RBP23.66■■□□□ 1.38
LRRC42-201ENST00000319223 AHDC1Q5TGY3 1603 aaPredicted RBP23.66■■□□□ 1.38
LRRC42-201ENST00000319223 RGPD8O14715 1765 aaPredicted RBP23.64■■□□□ 1.38
LRRC42-201ENST00000319223 COL16A1Q07092 1604 aaPredicted RBP23.64■■□□□ 1.37
LRRC42-201ENST00000319223 USP32Q8NFA0 1604 aa23.63■■□□□ 1.37
LRRC42-201ENST00000319223 PRR36Q9H6K5 1346 aa23.63■■□□□ 1.37
LRRC42-201ENST00000319223 NHSL1Q5SYE7 1610 aa23.63■■□□□ 1.37
LRRC42-201ENST00000319223 CDK19Q9BWU1 502 aa23.62■■□□□ 1.37
LRRC42-201ENST00000319223 QRICH2Q9H0J4 1663 aa23.61■■□□□ 1.37
LRRC42-201ENST00000319223 FOXO3O43524 673 aa23.6■■□□□ 1.37
LRRC42-201ENST00000319223 ANKARQ7Z5J8 1434 aa23.58■■□□□ 1.37
LRRC42-201ENST00000319223 TULP4Q9NRJ4 1543 aa23.58■■□□□ 1.37
LRRC42-201ENST00000319223 XPCQ01831 940 aaPredicted RBP23.57■■□□□ 1.36
LRRC42-201ENST00000319223 PHF8Q9UPP1 1060 aa23.57■■□□□ 1.36
LRRC42-201ENST00000319223 EIF3AQ14152 1382 aaKnown RBP23.56■■□□□ 1.36
LRRC42-201ENST00000319223 SOS2Q07890 1332 aaPredicted RBP23.56■■□□□ 1.36
LRRC42-201ENST00000319223 PMFBP1Q8TBY8 1022 aa23.56■■□□□ 1.36
LRRC42-201ENST00000319223 NUDT16Q96DE0 195 aaKnown RBP23.56■■□□□ 1.36
LRRC42-201ENST00000319223 ATP7BP35670 1465 aa23.54■■□□□ 1.36
LRRC42-201ENST00000319223 NPHP3Q7Z494 1330 aa23.53■■□□□ 1.36
LRRC42-201ENST00000319223 CABP2Q9NPB3 220 aa23.53■■□□□ 1.36
LRRC42-201ENST00000319223 JCADQ9P266 1359 aa23.53■■□□□ 1.36
LRRC42-201ENST00000319223 PXDNQ92626 1479 aa23.52■■□□□ 1.36
LRRC42-201ENST00000319223 LRRC59Q96AG4 307 aaKnown RBP23.52■■□□□ 1.36
LRRC42-201ENST00000319223 KIF1AQ12756 1690 aa23.52■■□□□ 1.36
LRRC42-201ENST00000319223 SRPK2P78362 688 aaKnown RBP23.51■■□□□ 1.35
LRRC42-201ENST00000319223 ST20-MTHFSA0A0A6YYL1 179 aa23.5■■□□□ 1.35
LRRC42-201ENST00000319223 KRT28Q7Z3Y7 464 aa23.49■■□□□ 1.35
LRRC42-201ENST00000319223 EVC2Q86UK5 1308 aa23.49■■□□□ 1.35
LRRC42-201ENST00000319223 CCDC61Q9Y6R9 512 aa23.47■■□□□ 1.35
LRRC42-201ENST00000319223 MED1Q15648 1581 aaPredicted RBP23.47■■□□□ 1.35
LRRC42-201ENST00000319223 USP47Q96K76 1375 aa23.47■■□□□ 1.35
LRRC42-201ENST00000319223 SBNO2Q9Y2G9 1366 aa23.47■■□□□ 1.35
LRRC42-201ENST00000319223 SHPRHQ149N8 1683 aa23.46■■□□□ 1.35
LRRC42-201ENST00000319223 PNPLA6Q8IY17 1366 aa23.46■■□□□ 1.35
LRRC42-201ENST00000319223 TESK2Q96S53 571 aa23.46■■□□□ 1.35
LRRC42-201ENST00000319223 TOPAZ1Q8N9V7 1692 aa23.46■■□□□ 1.35
LRRC42-201ENST00000319223 PSME1Q06323 249 aa23.45■■□□□ 1.34
LRRC42-201ENST00000319223 NGDNQ8NEJ9 315 aaKnown RBP23.44■■□□□ 1.34
LRRC42-201ENST00000319223 ITSN1Q15811 1721 aa23.44■■□□□ 1.34
LRRC42-201ENST00000319223 PLEKHG3A1L390 1219 aa23.43■■□□□ 1.34
LRRC42-201ENST00000319223 LRP6O75581 1613 aa23.42■■□□□ 1.34
LRRC42-201ENST00000319223 PPIP5K1Q6PFW1 1433 aa23.42■■□□□ 1.34
LRRC42-201ENST00000319223 CABP1Q9NZU7 370 aa23.42■■□□□ 1.34
LRRC42-201ENST00000319223 ACEP12821 1306 aa23.41■■□□□ 1.34
LRRC42-201ENST00000319223 SPATA31A6Q5VVP1 1343 aa23.41■■□□□ 1.34
LRRC42-201ENST00000319223 SPATA31A3Q5VYP0 1347 aa23.41■■□□□ 1.34
LRRC42-201ENST00000319223 NUTM2BA6NNL0 878 aaPredicted RBP23.41■■□□□ 1.34
LRRC42-201ENST00000319223 NUTM2EB1AL46 878 aaPredicted RBP23.41■■□□□ 1.34
LRRC42-201ENST00000319223 NUTM2AQ8IVF1 878 aaPredicted RBP23.41■■□□□ 1.34
LRRC42-201ENST00000319223 POLR3AO14802 1390 aaPredicted RBP23.39■■□□□ 1.34
LRRC42-201ENST00000319223 DISP3Q9P2K9 1392 aa23.39■■□□□ 1.34
LRRC42-201ENST00000319223 SBNO1A3KN83 1393 aa23.38■■□□□ 1.33
LRRC42-201ENST00000319223 TRPM3Q9HCF6 1732 aaPredicted RBP23.37■■□□□ 1.33
LRRC42-201ENST00000319223 TNS3Q68CZ2 1445 aa23.36■■□□□ 1.33
LRRC42-201ENST00000319223 COL22A1Q8NFW1 1626 aaPredicted RBP23.35■■□□□ 1.33
LRRC42-201ENST00000319223 LMOD2Q6P5Q4 547 aa23.34■■□□□ 1.33
LRRC42-201ENST00000319223 ATAD2Q6PL18 1390 aa23.34■■□□□ 1.33
LRRC42-201ENST00000319223 PLEKHG5O94827 1062 aa23.33■■□□□ 1.33
LRRC42-201ENST00000319223 PAK3O75914 559 aaPredicted RBP23.33■■□□□ 1.32
LRRC42-201ENST00000319223 RGS17Q9UGC6 210 aaPredicted RBP23.33■■□□□ 1.32
LRRC42-201ENST00000319223 HSPA5P11021 654 aaKnown RBP23.32■■□□□ 1.32
LRRC42-201ENST00000319223 CABLES1Q8TDN4 633 aa23.31■■□□□ 1.32
LRRC42-201ENST00000319223 ADAMTS2O95450 1211 aa23.3■■□□□ 1.32
LRRC42-201ENST00000319223 ALS2Q96Q42 1657 aa23.3■■□□□ 1.32
LRRC42-201ENST00000319223 EIF4G2P78344 907 aaKnown RBP eCLIP23.3■■□□□ 1.32
LRRC42-201ENST00000319223 TMF1P82094 1093 aa23.3■■□□□ 1.32
LRRC42-201ENST00000319223 MEX3CQ5U5Q3 659 aaKnown RBP23.3■■□□□ 1.32
LRRC42-201ENST00000319223 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
LRRC42-201ENST00000319223 SLC12A5Q9H2X9 1139 aa23.3■■□□□ 1.32
LRRC42-201ENST00000319223 TMC1Q8TDI8 760 aa23.29■■□□□ 1.32
LRRC42-201ENST00000319223 PUS7Q96PZ0 661 aaKnown RBP23.29■■□□□ 1.32
LRRC42-201ENST00000319223 ARHGEF10O15013 1369 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms